BLASTX nr result

ID: Coptis23_contig00009958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009958
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300353.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002300351.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002529027.1| glycerophosphoryl diester phosphodiesterase,...    70   2e-10
ref|XP_002276757.1| PREDICTED: probable glycerophosphoryl dieste...    68   7e-10
emb|CAN61355.1| hypothetical protein VITISV_027762 [Vitis vinifera]    67   2e-09

>ref|XP_002300353.1| predicted protein [Populus trichocarpa] gi|222847611|gb|EEE85158.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -2

Query: 252 TVDYDLNALQQTYLIRTVQSRTQRFDGLFPILTVEQV----PPGLWLNIQHDAFFTQHNX 85
           TVD+ LN L    L + + SR++RFD  +PI TVE V    PPGLWLNIQHDAFFTQHN 
Sbjct: 93  TVDFTLNELSLVSLAQGIYSRSERFDNTYPIQTVEDVANLKPPGLWLNIQHDAFFTQHNL 152

Query: 84  XXXXXXXXXXXXXXXXXXXSPEVGFLKS 1
                              SPE GFL+S
Sbjct: 153 SMRIYVLSLSRRVVINHLSSPEAGFLRS 180


>ref|XP_002300351.1| predicted protein [Populus trichocarpa] gi|222847609|gb|EEE85156.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
 Frame = -2

Query: 252 TVDYDLNALQQTYLIRTVQSRTQRFDGLFPILTVEQV----PPGLWLNIQHDAFFTQHNX 85
           TVD+ LN L    L + + SR++RFD ++PI TVE V    PPGLWLNIQ+DAFF QHN 
Sbjct: 87  TVDFTLNELSLVSLTQGIYSRSERFDYIYPIQTVEDVANLKPPGLWLNIQYDAFFKQHNL 146

Query: 84  XXXXXXXXXXXXXXXXXXXSPEVGFLK 4
                              SPEVGFL+
Sbjct: 147 SMRSYVLSLSRRVVINHLSSPEVGFLR 173


>ref|XP_002529027.1| glycerophosphoryl diester phosphodiesterase, putative [Ricinus
           communis] gi|223531507|gb|EEF33338.1| glycerophosphoryl
           diester phosphodiesterase, putative [Ricinus communis]
          Length = 768

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
 Frame = -2

Query: 252 TVDYDLNALQQTYLIRTVQSRTQRFDG-LFPILTVEQV----PPGLWLNIQHDAFFTQHN 88
           +VD+  N L    L + V SR+ +FDG LFPI TVE V    PP +WLNIQHDAFFTQHN
Sbjct: 133 SVDFTFNDLSSVVLTQGVYSRSNKFDGNLFPIQTVENVTGLKPPSIWLNIQHDAFFTQHN 192

Query: 87  XXXXXXXXXXXXXXXXXXXXSPEVGFLK 4
                               SPE+ FL+
Sbjct: 193 LSMRSYVLSLSKKVVINYISSPEMAFLR 220


>ref|XP_002276757.1| PREDICTED: probable glycerophosphoryl diester phosphodiesterase 1
           [Vitis vinifera] gi|297737518|emb|CBI26719.3| unnamed
           protein product [Vitis vinifera]
          Length = 757

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
 Frame = -2

Query: 252 TVDYDLNALQQTYLIRTVQSRTQRFDG-LFPILTVEQV-----PPGLWLNIQHDAFFTQH 91
           +VD+ L  L+   L + V SR+ RFDG LFPILTV+++     PPGLWLN+QHD F+T+H
Sbjct: 121 SVDFTLTDLETVALNQGVYSRSGRFDGNLFPILTVQEMVKLIRPPGLWLNLQHDVFYTKH 180

Query: 90  NXXXXXXXXXXXXXXXXXXXXSPEVGFLK 4
           N                    SPEV FL+
Sbjct: 181 NLSMRNFVLSVSKSVIVDYISSPEVAFLR 209


>emb|CAN61355.1| hypothetical protein VITISV_027762 [Vitis vinifera]
          Length = 642

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
 Frame = -2

Query: 252 TVDYDLNALQQTYLIRTVQSRTQRFDG-LFPILTVEQV-----PPGLWLNIQHDAFFTQH 91
           +VD+ L  L+   L + V SR+ +FDG LFPILTV+++     PPGLWLN+QHD F+T+H
Sbjct: 121 SVDFTLTDLETVALNQGVYSRSGKFDGNLFPILTVQEMVKLTRPPGLWLNLQHDVFYTKH 180

Query: 90  NXXXXXXXXXXXXXXXXXXXXSPEVGFLK 4
           N                    SPEV FL+
Sbjct: 181 NLSMRNFVLSVSKSVIVDYISSPEVAFLR 209


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