BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009953
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|1...   270   3e-70
ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapte...   261   1e-67
ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|2...   261   2e-67
ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arab...   250   3e-64
ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS...   248   8e-64

>ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|118481362|gb|ABK92624.1|
           unknown [Populus trichocarpa]
           gi|222851266|gb|EEE88813.1| predicted protein [Populus
           trichocarpa]
          Length = 158

 Score =  270 bits (690), Expect = 3e-70
 Identities = 128/158 (81%), Positives = 142/158 (89%)
 Frame = +3

Query: 66  MDTAICGRVSLSPNHVFNHKPGDKQSVYRGLCTNRGIPMTVSAAGPGKGGGLLDRPTIEK 245
           M+TAICGR++LSPNHVFN KPGDK SV RG C NRGI M +S    GKGGGLL++P IE+
Sbjct: 1   METAICGRIALSPNHVFNPKPGDKNSVCRGPCANRGILMAISTTCSGKGGGLLEKPVIER 60

Query: 246 TTPGRESEYDVRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAH 425
           TTPGRESE+D+RKS+K +PPYRVMLHNDNYNKREYVVQVLMKVIPGMT+D AVN+MQEAH
Sbjct: 61  TTPGRESEFDLRKSKKMAPPYRVMLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 120

Query: 426 INGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 539
            NGL+VVIICAQADAEEHC QLRGNGLLSSIEPASGGC
Sbjct: 121 YNGLSVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 158


>ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
           vinifera] gi|147853628|emb|CAN80233.1| hypothetical
           protein VITISV_037190 [Vitis vinifera]
          Length = 157

 Score =  261 bits (667), Expect = 1e-67
 Identities = 125/158 (79%), Positives = 141/158 (89%)
 Frame = +3

Query: 66  MDTAICGRVSLSPNHVFNHKPGDKQSVYRGLCTNRGIPMTVSAAGPGKGGGLLDRPTIEK 245
           M+ AICGR++LSPNHVFN K GDK S+ +G CTNR   M +SA+GPGKGG LL+RP IEK
Sbjct: 1   MENAICGRLALSPNHVFNSKSGDKHSLLKGPCTNRSFLMAISASGPGKGG-LLERPVIEK 59

Query: 246 TTPGRESEYDVRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAH 425
            TPGRESE+D+RKSRK +PPYRV+LHNDNYNKREYVVQVLMKVIPGMT+D AVN+MQEAH
Sbjct: 60  VTPGRESEFDLRKSRKIAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH 119

Query: 426 INGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 539
            NGL+VVIICAQADAE+HC QLRGNGLLSSIEPASGGC
Sbjct: 120 YNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 157


>ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|222864995|gb|EEF02126.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  261 bits (666), Expect = 2e-67
 Identities = 125/162 (77%), Positives = 143/162 (88%), Gaps = 4/162 (2%)
 Frame = +3

Query: 66  MDTAICGRVSLSPNHVFNHKPGDKQSVYRGLCTNRGIPMTVSAA----GPGKGGGLLDRP 233
           M+TAICGR++LSPNHVFN KPGDK SV RG C +RGI M++SA     G G GGG+L++P
Sbjct: 1   METAICGRIALSPNHVFNPKPGDKNSVCRGPCASRGILMSISATVSGKGGGGGGGILEKP 60

Query: 234 TIEKTTPGRESEYDVRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVM 413
            IE+TTPGRESE+D+RKS+K +PPYRV+LHNDNYNKREYVVQVLMKVIPGMT+D AVN+M
Sbjct: 61  VIERTTPGRESEFDLRKSKKMAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIM 120

Query: 414 QEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 539
           QEAH NGL+VVIIC QADAEEHC QLRGNGLLSSIEPASGGC
Sbjct: 121 QEAHYNGLSVVIICTQADAEEHCMQLRGNGLLSSIEPASGGC 162


>ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp.
           lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein
           ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  250 bits (638), Expect = 3e-64
 Identities = 119/159 (74%), Positives = 140/159 (88%), Gaps = 1/159 (0%)
 Frame = +3

Query: 66  MDTAICGRVSLSPNHVFNHKPGDKQSVYRGLCTNRGIPMTVSA-AGPGKGGGLLDRPTIE 242
           M+TAICGR++L+P+ +FN K GDK  V +G C NRG+ MT+S  A  GKGGG+LD+P IE
Sbjct: 1   METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRGVLMTLSTYAALGKGGGVLDKPIIE 60

Query: 243 KTTPGRESEYDVRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEA 422
           KTTPGRESE+D+RKS+K +PPYRV+LHNDN+NKREYVVQVLMKVIPGMTVD AVN+MQEA
Sbjct: 61  KTTPGRESEFDLRKSKKMAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQEA 120

Query: 423 HINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 539
           HINGLAVVI+CAQADAE+HC QLRGNGLLSS+EP  GGC
Sbjct: 121 HINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159


>ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis
           thaliana] gi|5734712|gb|AAD49977.1|AC008075_10 ESTs
           gb|T41781 and gb|AA586096 come from this gene
           [Arabidopsis thaliana]
           gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein
           [Arabidopsis thaliana] gi|15010628|gb|AAK73973.1|
           At1g68660/F24J5_4 [Arabidopsis thaliana]
           gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4
           [Arabidopsis thaliana] gi|21553930|gb|AAM63011.1|
           unknown [Arabidopsis thaliana]
           gi|332196703|gb|AEE34824.1| ATP-dependent Clp protease
           adaptor protein ClpS [Arabidopsis thaliana]
          Length = 159

 Score =  248 bits (634), Expect = 8e-64
 Identities = 119/159 (74%), Positives = 140/159 (88%), Gaps = 1/159 (0%)
 Frame = +3

Query: 66  MDTAICGRVSLSPNHVFNHKPGDKQSVYRGLCTNRGIPMTVS-AAGPGKGGGLLDRPTIE 242
           M+TAICGR++L+P+ +FN K GDK  V +G C NR I MT+S +A  GKGGG+LD+P IE
Sbjct: 1   METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60

Query: 243 KTTPGRESEYDVRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEA 422
           KTTPGRESE+D+RKS+K +PPYRV+LHNDN+NKREYVVQVLMKVIPGMTVD AVN+MQEA
Sbjct: 61  KTTPGRESEFDLRKSKKIAPPYRVILHNDNFNKREYVVQVLMKVIPGMTVDNAVNIMQEA 120

Query: 423 HINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 539
           HINGLAVVI+CAQADAE+HC QLRGNGLLSS+EP  GGC
Sbjct: 121 HINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159