BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009939
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...   288   2e-75
ref|XP_002517277.1| cyclin B, putative [Ricinus communis] gi|223...   270   4e-70
dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]                     261   2e-67
ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-...   257   4e-66
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   257   4e-66

>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  288 bits (738), Expect = 2e-75
 Identities = 166/323 (51%), Positives = 206/323 (63%), Gaps = 12/323 (3%)
 Frame = -1

Query: 935 MGSRPVVP--NQPRXXXXXXXXXXXXXXXXXGNNRRALINVTNRGVDGRGIDANP---IT 771
           M SRP+VP  +QPR                 G NRRAL ++ N  V  RG+D  P   I+
Sbjct: 1   MASRPIVPQHHQPRGEALAGDGKQRKNGAAEGRNRRALGDIGNL-VTVRGVDGKPQPQIS 59

Query: 770 RPVTRNFCAQIISKPQETVTENNNKKQIVVVVDG-PIV------GKEVAAVRKVALKNVT 612
           RPVTR+FCAQ+++  Q      NNKK + V VDG PI+      GK   A +  A K VT
Sbjct: 60  RPVTRSFCAQLLANAQAAAAAENNKKAVCVNVDGAPIITDGGAAGKAPVAAKAAAQKKVT 119

Query: 611 VRPKPKKVIEISPDTEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTARSKTACG 432
           ++PKP++VIEISPD+EE K                              +LTARSK ACG
Sbjct: 120 IKPKPEQVIEISPDSEEVKQEKPVSKKKGREGSSKKNVKTMTS------ILTARSKVACG 173

Query: 431 ITNKPKXXXXXXXXXXANNHLAAVDYVEDIYNYYKLAENSSRVHAYMYTQHEINEKMRDI 252
           +TNKPK          A N LAAV+YVEDIY +YKL E+ S+VH YM +Q EINEKMR I
Sbjct: 174 LTNKPKEQIVDIDAADAGNDLAAVEYVEDIYKFYKLIESESQVHDYMDSQAEINEKMRAI 233

Query: 251 LVEWLLEVHNKFELMPQTLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIASKYEEIWAP 72
           LV+WL+EVH+KFELMP+TLYL ++IVDR+LS+++V R+ LQL+G+SAML+ASKYEEIWAP
Sbjct: 234 LVDWLIEVHHKFELMPETLYLTINIVDRFLSIKTVPRRELQLVGISAMLMASKYEEIWAP 293

Query: 71  EVNDFVCIADNAYGRAQILAMEK 3
           EVNDFVCI+D AY   QIL MEK
Sbjct: 294 EVNDFVCISDRAYTHQQILMMEK 316


>ref|XP_002517277.1| cyclin B, putative [Ricinus communis] gi|223543540|gb|EEF45070.1|
           cyclin B, putative [Ricinus communis]
          Length = 455

 Score =  270 bits (691), Expect = 4e-70
 Identities = 155/318 (48%), Positives = 195/318 (61%), Gaps = 7/318 (2%)
 Frame = -1

Query: 935 MGSRPVVPNQPRXXXXXXXXXXXXXXXXXGN-NRRALINVTNRGVDGRGIDA---NPITR 768
           M SRP+VP QPR                    NRR L ++ N     RGIDA   N ++R
Sbjct: 1   MASRPIVPQQPRGEAVAGGNNMQQKKNAGDGRNRRPLGDIGNLATV-RGIDAKLANQVSR 59

Query: 767 PVTRNFCAQIISKPQETVTENNNKKQIVVVVDGPIV--GKEVAAVRKVAL-KNVTVRPKP 597
           P+TR+FCAQ+++  Q      NNKK + V VD  +   GK+ A   K A  K V V+PKP
Sbjct: 60  PMTRSFCAQLLANAQNAAAAENNKKLVCVNVDKVVAPDGKKAAVAAKPAQQKKVIVKPKP 119

Query: 596 KKVIEISPDTEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTARSKTACGITNKP 417
           ++VIEISPDTE+E                               VLTARSK ACG+TNKP
Sbjct: 120 QEVIEISPDTEKE-VVIEKQQKKAVEMKKELEGSAKKKVQTLSSVLTARSKLACGLTNKP 178

Query: 416 KXXXXXXXXXXANNHLAAVDYVEDIYNYYKLAENSSRVHAYMYTQHEINEKMRDILVEWL 237
           K          ANN LA V+YVEDIY +YKL EN SR H YM +Q +INEKMR IL++WL
Sbjct: 179 KEDIIDIDAADANNDLAGVEYVEDIYKFYKLVENESRPHNYMASQPDINEKMRGILIDWL 238

Query: 236 LEVHNKFELMPQTLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDF 57
           ++VH KFEL P+TLYL ++I+DR+L +++VSR+ LQL+G+SA L+ASKYEEIW PEVND 
Sbjct: 239 IDVHQKFELSPETLYLTINIIDRFLCVKNVSRRELQLVGISATLMASKYEEIWPPEVNDL 298

Query: 56  VCIADNAYGRAQILAMEK 3
           VCI+D AY  AQ+L MEK
Sbjct: 299 VCISDMAYTHAQVLIMEK 316


>dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]
          Length = 446

 Score =  261 bits (668), Expect = 2e-67
 Identities = 144/285 (50%), Positives = 181/285 (63%), Gaps = 5/285 (1%)
 Frame = -1

Query: 842 NRRALINVTNRGVDGRGIDANPIT-RPVTRNFCAQIISKPQETVTENNNKKQIVVVVDGP 666
           NR+AL ++ N  V  RG++  P+  RP+TR FCAQ+++  Q      N KK +VV  D P
Sbjct: 33  NRKALGDIGNNMVTVRGVEGKPLPQRPITRGFCAQLLANAQAAA--ENQKKSMVVNGDAP 90

Query: 665 IVGKEV----AAVRKVALKNVTVRPKPKKVIEISPDTEEEKXXXXXXXXXXXXXXXXXXX 498
           IV K V     A +K   K   V+PKP  VIEISPDTEE+                    
Sbjct: 91  IVAKGVLPVKGAAKKPVQKKAAVKPKPD-VIEISPDTEEQ--------VKENKQKKKAGD 141

Query: 497 XXXXXXXXXXXVLTARSKTACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYNYYKLAE 318
                       LTARSK ACG+++KPK           NN LA V+YVEDIYN+YK+AE
Sbjct: 142 DSSVKKATLTSTLTARSKAACGLSHKPKVQIVDIDAADVNNELAVVEYVEDIYNFYKIAE 201

Query: 317 NSSRVHAYMYTQHEINEKMRDILVEWLLEVHNKFELMPQTLYLIVHIVDRYLSMRSVSRK 138
           N SR+H YM +Q EI  +MR IL++WL+EVH+KFEL  +TLYL ++IVDRYL++ + SR+
Sbjct: 202 NESRIHDYMDSQPEITARMRAILIDWLIEVHHKFELSQETLYLTINIVDRYLAVTTTSRR 261

Query: 137 ILQLIGMSAMLIASKYEEIWAPEVNDFVCIADNAYGRAQILAMEK 3
            LQL+GMSAMLIASKYEEIWAPEVNDFVCI+D AY   Q+L MEK
Sbjct: 262 ELQLVGMSAMLIASKYEEIWAPEVNDFVCISDKAYSHEQVLGMEK 306


>ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
           gi|449529028|ref|XP_004171503.1| PREDICTED:
           G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
          Length = 455

 Score =  257 bits (657), Expect = 4e-66
 Identities = 154/318 (48%), Positives = 188/318 (59%), Gaps = 7/318 (2%)
 Frame = -1

Query: 935 MGSRPVVPNQPRXXXXXXXXXXXXXXXXXG-NNRRALINVTNRGVDGRGIDANPITRPVT 759
           M SRP+VP Q R                    NRRAL ++ N  V  RGIDA    RP+T
Sbjct: 1   MASRPIVPQQIRGEAVNGGGKQAKGAAGAEAKNRRALGDIGNL-VTVRGIDAKA-NRPIT 58

Query: 758 RNFCAQIISKPQETVTENNNKKQIVVVVDG--PIVGKEVAAVRKV----ALKNVTVRPKP 597
           R+FCAQ+++  Q      NNKKQ+ V +DG  PI+   V AV+K     A K V V+P  
Sbjct: 59  RSFCAQLLANAQAAAKAENNKKQVPVTIDGAAPILDAGVVAVKKAGPKPATKKVIVKPT- 117

Query: 596 KKVIEISPDTEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTARSKTACGITNKP 417
            +VI+ISPDT E+                               VLTARSK ACGIT KP
Sbjct: 118 SEVIDISPDTVEK---VEEKEAKCAKKKKEGEGPAKKKAQTLTSVLTARSKAACGITKKP 174

Query: 416 KXXXXXXXXXXANNHLAAVDYVEDIYNYYKLAENSSRVHAYMYTQHEINEKMRDILVEWL 237
           K            N LAAV+YVEDIY +YK AEN SR H YM +Q EIN  MR ILV+WL
Sbjct: 175 KEQIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDSQPEINPSMRAILVDWL 234

Query: 236 LEVHNKFELMPQTLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDF 57
           ++VHNKFEL P+T YL ++I+DR+L+ + V R+ LQL+G+ AMLIASKYEEIWAPEVNDF
Sbjct: 235 VDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLVGIGAMLIASKYEEIWAPEVNDF 294

Query: 56  VCIADNAYGRAQILAMEK 3
           VC++D AY   QIL MEK
Sbjct: 295 VCLSDRAYTHQQILVMEK 312


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  257 bits (657), Expect = 4e-66
 Identities = 144/284 (50%), Positives = 183/284 (64%), Gaps = 5/284 (1%)
 Frame = -1

Query: 839 RRALINVTNRGVDGRGIDANP---ITRPVTRNFCAQIISKPQETVTENNNKKQIVVVVDG 669
           RRAL ++ N  V  RG++  P   ++RP+TR+FCAQ+++  Q      NNKK   V VDG
Sbjct: 33  RRALGDIGNL-VTVRGVEGKPLPQVSRPITRSFCAQLLANAQAAAVAENNKKCKAVNVDG 91

Query: 668 PIVGKEVA-AVRKVALKNV-TVRPKPKKVIEISPDTEEEKXXXXXXXXXXXXXXXXXXXX 495
              G  +    RK A K   T++PKP+ VIEIS D+E+ K                    
Sbjct: 92  AADGGIIPKGARKPAQKKAATIKPKPEAVIEISSDSEQVKKEKKPSKKDAPTLTS----- 146

Query: 494 XXXXXXXXXXVLTARSKTACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYNYYKLAEN 315
                      LTARSK ACG++ KPK          A+N LA V+YVEDIY +YK+AEN
Sbjct: 147 ----------TLTARSKAACGLSKKPKDQIIDIDAADADNELAVVEYVEDIYKFYKIAEN 196

Query: 314 SSRVHAYMYTQHEINEKMRDILVEWLLEVHNKFELMPQTLYLIVHIVDRYLSMRSVSRKI 135
            SRVH YM +Q EIN+KMR IL++WL+EVH+KFEL P+TLYL ++IVDRYL++++  RK 
Sbjct: 197 ESRVHNYMDSQPEINDKMRAILIDWLIEVHHKFELNPETLYLTINIVDRYLAVQTTLRKE 256

Query: 134 LQLIGMSAMLIASKYEEIWAPEVNDFVCIADNAYGRAQILAMEK 3
           LQL+GMSAMLIASKYEEIWAPEVNDFVCI+D AY   Q+L MEK
Sbjct: 257 LQLVGMSAMLIASKYEEIWAPEVNDFVCISDRAYSHQQVLVMEK 300