BLASTX nr result

ID: Coptis23_contig00009937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009937
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit ...   668   0.0  
ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus co...   663   0.0  
gb|ABK95003.1| unknown [Populus trichocarpa]                          657   0.0  
ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|2...   657   0.0  
ref|XP_003548126.1| PREDICTED: pyruvate dehydrogenase E1 compone...   655   0.0  

>gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]
          Length = 431

 Score =  668 bits (1724), Expect = 0.0
 Identities = 318/354 (89%), Positives = 338/354 (95%)
 Frame = +2

Query: 182  NLLITKEEGLVLYEDMVLGRTFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQED 361
            NLLITKEEGL LYEDMVLGR FEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK+ED
Sbjct: 78   NLLITKEEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKED 137

Query: 362  SVVSTYRDHVHALSKGVPASAVMSELFGKKTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 541
            SVVSTYRDHVHALSKGVPA  VMSELFGK TGCCRGQGGSMHMFSKEHNVLGGFAFIGEG
Sbjct: 138  SVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 197

Query: 542  IPVATGAAFTSKYKREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVE 721
            IPVATGAAFTSKY+REVLKEADCDHVTLAFFGDGTCNNGQF+ECLNMA LWKLPI+FVVE
Sbjct: 198  IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIIFVVE 257

Query: 722  NNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPSL 901
            NNLWAIGMSHLR+TSDPEI+KKGPAFGMPGVHVDGMDVLKVREVA EA+GRARRGEGP+L
Sbjct: 258  NNLWAIGMSHLRSTSDPEIWKKGPAFGMPGVHVDGMDVLKVREVANEAVGRARRGEGPTL 317

Query: 902  IECETYRFRGHSLADPDELRDAGEKSHYSTRCPIEALKKYIFENNLATEVDLKTIDKKID 1081
            +ECETYRFRGHSLADPDELRD  EK+HY+TR PI ALKKY+FENNL  E +LK IDKKID
Sbjct: 318  VECETYRFRGHSLADPDELRDPAEKNHYATRDPITALKKYMFENNLVNEAELKAIDKKID 377

Query: 1082 ELIEEAVEFAEASPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV 1243
            EL+EE+VEFA+ASP+P R+QLLENVFADP+GFGIGPDG+YRCEDPKFTEGTAQV
Sbjct: 378  ELVEESVEFADASPVPARNQLLENVFADPRGFGIGPDGRYRCEDPKFTEGTAQV 431


>ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis]
            gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase,
            putative [Ricinus communis]
          Length = 433

 Score =  663 bits (1710), Expect = 0.0
 Identities = 329/414 (79%), Positives = 356/414 (85%)
 Frame = +2

Query: 2    SQEKPLFHPINQKKSSFIGSTHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
            ++ +PLF P+ +  SSFIGST K                                     
Sbjct: 23   NKHQPLFDPL-KTTSSFIGSTSKLRFSALPKLNHVSSFRRSAIVAVSEAVKEKKLKSTS- 80

Query: 182  NLLITKEEGLVLYEDMVLGRTFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQED 361
            NLLITKEEGLVLYEDMVLGR FEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK+ED
Sbjct: 81   NLLITKEEGLVLYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKED 140

Query: 362  SVVSTYRDHVHALSKGVPASAVMSELFGKKTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 541
            SVVSTYRDHVHALSKGVPA AVMSELFGK TGCCRGQGGSMHMFSK+HNVLGGFAFIGEG
Sbjct: 141  SVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKDHNVLGGFAFIGEG 200

Query: 542  IPVATGAAFTSKYKREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVE 721
            IPVATGAAFTSKY+REVLKE DCDHVTLAFFGDGTCNNGQFFECLNMA LWKLPIVFVVE
Sbjct: 201  IPVATGAAFTSKYRREVLKE-DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVE 259

Query: 722  NNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPSL 901
            NNLWAIGMSHLRATSDP+I+KKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGP+L
Sbjct: 260  NNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTL 319

Query: 902  IECETYRFRGHSLADPDELRDAGEKSHYSTRCPIEALKKYIFENNLATEVDLKTIDKKID 1081
            +ECETYRFRGHSLADPDELRD  EK+HY+ R PI +LKKYI EN+LA+E +LK I+KKID
Sbjct: 320  VECETYRFRGHSLADPDELRDPAEKAHYAARDPITSLKKYIIENSLASEAELKAIEKKID 379

Query: 1082 ELIEEAVEFAEASPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV 1243
            E++E++VEFA+ SP+PPRSQLLENVFADPKGFGIGPDG+YRCEDPKFT+GTA V
Sbjct: 380  EVVEDSVEFADESPVPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTQGTAHV 433


>gb|ABK95003.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  657 bits (1696), Expect = 0.0
 Identities = 314/354 (88%), Positives = 337/354 (95%)
 Frame = +2

Query: 182  NLLITKEEGLVLYEDMVLGRTFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQED 361
            NLLITKEEGL +YEDM+LGR FEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK+ED
Sbjct: 89   NLLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKRED 148

Query: 362  SVVSTYRDHVHALSKGVPASAVMSELFGKKTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 541
            SVVSTYRDHVHALSKGVPA AVMSELFGK TGCCRGQGGSMHMFSKEHN++GGFAFIGEG
Sbjct: 149  SVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEG 208

Query: 542  IPVATGAAFTSKYKREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVE 721
            IPVATGAAF+SKY+REVLKEADCDHVTLAFFGDGTCNNGQFFECLNMA LWKLPIVFVVE
Sbjct: 209  IPVATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVE 268

Query: 722  NNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPSL 901
            NNLWAIGMSH+RATSDPEI+KKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGP+L
Sbjct: 269  NNLWAIGMSHVRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTL 328

Query: 902  IECETYRFRGHSLADPDELRDAGEKSHYSTRCPIEALKKYIFENNLATEVDLKTIDKKID 1081
            +ECETYRFRGHSLADPDELRD  EK+ Y+ R PI ALKKY+ EN+LA+E +LK I+KKID
Sbjct: 329  VECETYRFRGHSLADPDELRDPAEKARYAARDPIAALKKYMIENSLASEAELKAIEKKID 388

Query: 1082 ELIEEAVEFAEASPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV 1243
            E++EEAVEFA+ SP P RSQLLENVFADPKGFGIGPDG+YRCEDPKFTEGTA+V
Sbjct: 389  EVVEEAVEFADESPHPSRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 442


>ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|222843168|gb|EEE80715.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  657 bits (1694), Expect = 0.0
 Identities = 313/354 (88%), Positives = 337/354 (95%)
 Frame = +2

Query: 182  NLLITKEEGLVLYEDMVLGRTFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQED 361
            N+LITKEEGL +YEDM+LGR FEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK+ED
Sbjct: 2    NMLITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKRED 61

Query: 362  SVVSTYRDHVHALSKGVPASAVMSELFGKKTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 541
            SVVSTYRDHVHALSKGVPA AVMSELFGK TGCCRGQGGSMHMFSKEHN++GGFAFIGEG
Sbjct: 62   SVVSTYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEG 121

Query: 542  IPVATGAAFTSKYKREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVE 721
            IPVATGAAF+SKY+REVLKEADCDHVTLAFFGDGTCNNGQFFECLNMA LWKLPIVFVVE
Sbjct: 122  IPVATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVE 181

Query: 722  NNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPSL 901
            NNLWAIGMSH+RATSDPEI+KKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGP+L
Sbjct: 182  NNLWAIGMSHVRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTL 241

Query: 902  IECETYRFRGHSLADPDELRDAGEKSHYSTRCPIEALKKYIFENNLATEVDLKTIDKKID 1081
            +ECETYRFRGHSLADPDELRD  EK+ Y+ R PI ALKKY+ EN+LA+E +LK I+KKID
Sbjct: 242  VECETYRFRGHSLADPDELRDPAEKARYAARDPIAALKKYMIENSLASEAELKAIEKKID 301

Query: 1082 ELIEEAVEFAEASPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV 1243
            E++EEAVEFA+ SP P RSQLLENVFADPKGFGIGPDG+YRCEDPKFTEGTA+V
Sbjct: 302  EVVEEAVEFADESPHPSRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 355


>ref|XP_003548126.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-like
            [Glycine max]
          Length = 432

 Score =  655 bits (1691), Expect = 0.0
 Identities = 310/354 (87%), Positives = 335/354 (94%)
 Frame = +2

Query: 182  NLLITKEEGLVLYEDMVLGRTFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQED 361
            NLL+TKEEGL LYEDM+LGR FED CA+MYYRGKMFGFVHLYNGQE VSTGFIKLLK+ED
Sbjct: 79   NLLVTKEEGLELYEDMILGRFFEDKCAEMYYRGKMFGFVHLYNGQETVSTGFIKLLKKED 138

Query: 362  SVVSTYRDHVHALSKGVPASAVMSELFGKKTGCCRGQGGSMHMFSKEHNVLGGFAFIGEG 541
            SVVSTYRDHVHALSKGVP+  VMSELFGK TGCCRGQGGSMHMFSKEHN+LGGFAFIGEG
Sbjct: 139  SVVSTYRDHVHALSKGVPSREVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEG 198

Query: 542  IPVATGAAFTSKYKREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVE 721
            IPVATGAAF+SKY+REVLK+ADCDHVTLAFFGDGTCNNGQF+ECLNMA LWKLPIVFVVE
Sbjct: 199  IPVATGAAFSSKYRREVLKQADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVE 258

Query: 722  NNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPSL 901
            NNLWAIGMSHLRATSDP+I+KKGPAFGMPGVHVDGMDVL+VREVAKEA+GRARRGEGP+L
Sbjct: 259  NNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLQVREVAKEAVGRARRGEGPTL 318

Query: 902  IECETYRFRGHSLADPDELRDAGEKSHYSTRCPIEALKKYIFENNLATEVDLKTIDKKID 1081
            +ECETYRFRGHSLADPDELRD  EK HY+ R PI ALKKY+FENNLA E +LKTI+KKID
Sbjct: 319  VECETYRFRGHSLADPDELRDPAEKEHYAGRDPITALKKYLFENNLANEQELKTIEKKID 378

Query: 1082 ELIEEAVEFAEASPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTEGTAQV 1243
            E++E+AVEFA+ SPLPPRSQLLENVFADPKGFGIGPDG YRCEDPKFT+GTA V
Sbjct: 379  EILEDAVEFADKSPLPPRSQLLENVFADPKGFGIGPDGSYRCEDPKFTQGTAHV 432


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