BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009918
         (1768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...   407   0.0  
emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]   401   0.0  
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   396   0.0  
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              395   0.0  
gb|ACI43571.1| RBP50 [Cucurbita maxima]                               379   0.0  

>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           isoform 1 [Vitis vinifera]
          Length = 448

 Score =  407 bits (1045), Expect(2) = 0.0
 Identities = 206/236 (87%), Positives = 217/236 (91%), Gaps = 1/236 (0%)
 Frame = +1

Query: 16  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 195
           MTEPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 196 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 375
           Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 376 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 555
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 556 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYSDAGSLYPLQPAGAR-VAFPQ 720
           NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GY D G +Y LQP GAR VAFPQ
Sbjct: 180 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQ 235



 Score =  339 bits (869), Expect(2) = 0.0
 Identities = 167/214 (78%), Positives = 181/214 (84%)
 Frame = +3

Query: 792  QMGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 971
            QMGN       F GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLL
Sbjct: 235  QMGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLL 294

Query: 972  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 1151
            R+KPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNR
Sbjct: 295  RSKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNR 354

Query: 1152 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALIL 1331
            FNRNA+KNYRYCCSPTKMIH+S+LPQD            HGSIVNTKLFE N KKQAL+L
Sbjct: 355  FNRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVL 414

Query: 1332 FETEEQATEALVCKHAKTIDRSVIRISFSQLQSI 1433
            FETEEQATEALVCKHA  ID S IRISFSQLQ+I
Sbjct: 415  FETEEQATEALVCKHASLIDGSTIRISFSQLQAI 448


>emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
          Length = 476

 Score =  401 bits (1031), Expect(2) = 0.0
 Identities = 201/230 (87%), Positives = 212/230 (92%)
 Frame = +1

Query: 16  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 195
           MTEPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 196 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 375
           Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 376 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 555
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 556 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYSDAGSLYPLQPAGAR 705
           NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GY D G +Y LQP GAR
Sbjct: 180 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGAR 229



 Score =  337 bits (864), Expect(2) = 0.0
 Identities = 166/213 (77%), Positives = 180/213 (84%)
 Frame = +3

Query: 795  MGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 974
            MGN       F GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLLR
Sbjct: 264  MGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLR 323

Query: 975  NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 1154
            +KPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNRF
Sbjct: 324  SKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRF 383

Query: 1155 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILF 1334
            NRNA+KNYRYCCSPTKMIH+S+LPQD            HGSIVNTKLFE N KKQAL+LF
Sbjct: 384  NRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLF 443

Query: 1335 ETEEQATEALVCKHAKTIDRSVIRISFSQLQSI 1433
            ETEEQATEALVCKHA  ID S IRISFSQLQ+I
Sbjct: 444  ETEEQATEALVCKHASLIDGSTIRISFSQLQAI 476


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  396 bits (1018), Expect(2) = 0.0
 Identities = 198/235 (84%), Positives = 211/235 (89%)
 Frame = +1

Query: 16  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 195
           MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 196 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 375
           YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE-VSPNRILLVTIHHLLYPITVE 117

Query: 376 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 555
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 118 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 177

Query: 556 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYSDAGSLYPLQPAGARVAFPQ 720
           NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GY DAG +Y LQP    V FPQ
Sbjct: 178 NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQ 232



 Score =  332 bits (852), Expect(2) = 0.0
 Identities = 164/214 (76%), Positives = 180/214 (84%)
 Frame = +3

Query: 792  QMGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 971
            QM N       F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLL
Sbjct: 232  QMPNASAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLL 291

Query: 972  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 1151
            RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNR
Sbjct: 292  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNR 351

Query: 1152 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALIL 1331
            FNRNA+KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++
Sbjct: 352  FNRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVM 411

Query: 1332 FETEEQATEALVCKHAKTIDRSVIRISFSQLQSI 1433
            FE EEQATEALVCKHA  +    IRISFSQLQ I
Sbjct: 412  FENEEQATEALVCKHATPLGGLAIRISFSQLQGI 445


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  395 bits (1016), Expect(2) = 0.0
 Identities = 198/235 (84%), Positives = 211/235 (89%)
 Frame = +1

Query: 16  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 195
           MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 196 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 375
           YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE---PNRILLVTIHHLLYPITVE 115

Query: 376 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 555
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 116 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 556 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYSDAGSLYPLQPAGARVAFPQ 720
           NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GY DAG +Y LQP    V FPQ
Sbjct: 176 NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQ 230



 Score =  332 bits (852), Expect(2) = 0.0
 Identities = 164/214 (76%), Positives = 180/214 (84%)
 Frame = +3

Query: 792  QMGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 971
            QM N       F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLL
Sbjct: 230  QMPNASAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLL 289

Query: 972  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 1151
            RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNR
Sbjct: 290  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNR 349

Query: 1152 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALIL 1331
            FNRNA+KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++
Sbjct: 350  FNRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVM 409

Query: 1332 FETEEQATEALVCKHAKTIDRSVIRISFSQLQSI 1433
            FE EEQATEALVCKHA  +    IRISFSQLQ I
Sbjct: 410  FENEEQATEALVCKHATPLGGLAIRISFSQLQGI 443


>gb|ACI43571.1| RBP50 [Cucurbita maxima]
          Length = 445

 Score =  379 bits (974), Expect(2) = 0.0
 Identities = 192/237 (81%), Positives = 211/237 (89%), Gaps = 2/237 (0%)
 Frame = +1

Query: 16  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 195
           MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQAL+QM D+ SAV+A+Q+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 196 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 375
           + +VQPS+RGRNVY+QFSSHQELTT DQN  GR  GD+   PNRILLVTIHH+LYPITVE
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGR--GDE---PNRILLVTIHHMLYPITVE 115

Query: 376 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 555
           VLHQVF PHGFVEKIVTFQKSAGFQAL+QYQTRQ A++ART+LQGRNIYDGCCQLDIQFS
Sbjct: 116 VLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYDGCCQLDIQFS 175

Query: 556 NLTELQVNYNNERSRDFTNPSLPSEQKGR-SSQPGYSDAGSLYPLQPAGA-RVAFPQ 720
           NL ELQVNYNNERSRDFTNPSLPSE KGR S QPGY DAG +Y LQ +GA  V FPQ
Sbjct: 176 NLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGAGPVGFPQ 232



 Score =  341 bits (874), Expect(2) = 0.0
 Identities = 166/214 (77%), Positives = 182/214 (85%)
 Frame = +3

Query: 792  QMGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLL 971
            QM N       F GGLPPG+SGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNI R+KLL
Sbjct: 232  QMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIARIKLL 291

Query: 972  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNR 1151
            RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSKH +IT GADTHEY NSNLNR
Sbjct: 292  RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNR 351

Query: 1152 FNRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALIL 1331
            FNRNA+KNYRYCCSPTKMIH+SSL Q+            HG I+NTKLFE+N KKQALI+
Sbjct: 352  FNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVNLLEEHGPIINTKLFEMNGKKQALIM 411

Query: 1332 FETEEQATEALVCKHAKTIDRSVIRISFSQLQSI 1433
            F+TEEQATEALVCKHA ++  S+IRISFSQLQSI
Sbjct: 412  FDTEEQATEALVCKHASSLSGSIIRISFSQLQSI 445