BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009917
         (1503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   566   e-159
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   547   e-153
ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...   539   e-151
ref|XP_004152653.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   517   e-144
ref|XP_002307715.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144

>ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6 [Vitis vinifera]
            gi|302142647|emb|CBI19850.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  566 bits (1458), Expect = e-159
 Identities = 294/483 (60%), Positives = 350/483 (72%), Gaps = 2/483 (0%)
 Frame = +1

Query: 4    NNVEKCTSSSSRITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLVPLIGCPFGS 183
            N+++  +  + R+TWEGCSVLLDINDGDRLVFARLS S+TLKIG+K CSL PLIGCPFGS
Sbjct: 4    NSLQNDSIQNPRVTWEGCSVLLDINDGDRLVFARLSASATLKIGNKNCSLQPLIGCPFGS 63

Query: 184  TFQLDSTESSAPYLSRIL--VENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLS 357
             FQ+D+     PYLSR+    E N+      ++   + ++K+E +DNRA+VDNN AQSL+
Sbjct: 64   LFQVDNGPRG-PYLSRVTPSAEGND------LQETQDCQLKDEPKDNRAIVDNNKAQSLT 116

Query: 358  GQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARS 537
            G+DID +RRQGATGD+IVEALI+NS+T+EKKT FSQEKYR++KQKKY+PRVLLRRPF RS
Sbjct: 117  GEDIDEMRRQGATGDEIVEALISNSATYEKKTSFSQEKYRLKKQKKYSPRVLLRRPFCRS 176

Query: 538  ICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYV 717
            ICEAYFKKYPARIG+LR+DTLSLLLSMAN++ +SDVLVVDMVGG+LTGAVAERLGGTGYV
Sbjct: 177  ICEAYFKKYPARIGFLRVDTLSLLLSMANIAAHSDVLVVDMVGGLLTGAVAERLGGTGYV 236

Query: 718  CNTYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXX 897
            CN Y G T YPMDIVR        C  IVRSP   L        E F             
Sbjct: 237  CNAYLGDTPYPMDIVRIFNFSSEICKRIVRSPVDGLRSIQDGTSEQFFQHKGVSNSEIQS 296

Query: 898  GDESSSPPLFKLEAVVIQNQVSSPSCLHSVSNAHPSFLSGNENLGPALTTFMDETDSSSV 1077
             ++ SS   F                 HS+S    +  S N  L   L   M       V
Sbjct: 297  NEQMSSQDSFP----------------HSISTEETTLSSENGMLD--LIPQMVTASPPQV 338

Query: 1078 SRVCKPTKSGVKATQEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQ 1257
            ++ CK TK+G  A+ + INLWK +GFSSL+IAAPELD WS +Q+ LP LSYSA FA+YHQ
Sbjct: 339  AKTCKATKAGENASLDAINLWKENGFSSLLIAAPELDVWSIVQEFLPFLSYSASFAIYHQ 398

Query: 1258 YLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICST 1437
            YLQPL TCMHNLQ+ K+AIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSG +ICS+
Sbjct: 399  YLQPLATCMHNLQLGKMAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGTRICSS 458

Query: 1438 EAQ 1446
            ++Q
Sbjct: 459  DSQ 461


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Glycine max]
          Length = 440

 Score =  547 bits (1410), Expect = e-153
 Identities = 290/477 (60%), Positives = 356/477 (74%), Gaps = 3/477 (0%)
 Frame = +1

Query: 19   CTSSSSRITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLVPLIGCPFGSTFQLD 198
            C SSSSR+TWEGCSVLLDINDGDRLVFARLS ++ LKIG+K CSL PLIGCPFG+ FQ+D
Sbjct: 2    CESSSSRVTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQVD 61

Query: 199  STE-SSAPYLSRILVENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQDIDA 375
                S A  + ++   NN+    +V +G+  V+    SRDNRALVDNN+AQSL+G+DI+A
Sbjct: 62   GPFLSPAQGMDKV---NNDNNPEEVRDGRANVD----SRDNRALVDNNTAQSLTGEDIEA 114

Query: 376  LRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYF 555
            +RRQGA G++I+EALIANS+TFEKKT FSQEKYR++KQKKYAP+VL+RRP ARSICEAYF
Sbjct: 115  MRRQGAGGNEIIEALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLMRRPVARSICEAYF 174

Query: 556  KKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFG 735
            KKYP++IG+LR+DTLSLLLSM NVS  SD+LVVDMVGG+LTGAVAERLGGTG+VCN+Y G
Sbjct: 175  KKYPSKIGFLRVDTLSLLLSMGNVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYIG 234

Query: 736  VTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESSS 915
               Y MDIVR        C  IVRSP SDL L+   + E                 ++  
Sbjct: 235  QAPYSMDIVRIFNLSDEICKRIVRSPISDL-LSQKESPE-----------------QTLQ 276

Query: 916  PPLFKLEAVVIQNQVSSPSCLHSVSNAHPSFLS--GNENLGPALTTFMDETDSSSVSRVC 1089
            P         +Q+Q+S+ + +  +S++  + +S  G EN  PA               V 
Sbjct: 277  PDDACNVESHVQDQISASTSMEDISHSSENGISDLGAENTEPA-------------KEVW 323

Query: 1090 KPTKSGVKATQEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQP 1269
            K  K+G +A +E+I+LWK +GFSSLIIAAPELDTW+ ++D+LPLL+ SAPFA+YHQYLQP
Sbjct: 324  KAPKAGERAQKEIIDLWKENGFSSLIIAAPELDTWTLVRDILPLLADSAPFAIYHQYLQP 383

Query: 1270 LTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICSTE 1440
            L TCMHNLQ+ K+AIGLQI+EPWLREYQVLPSRTHPCMQMS+FGGYILSG KICSTE
Sbjct: 384  LATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPCMQMSSFGGYILSGTKICSTE 440


>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
            [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
            (adenine-N(1)-)-methyltransferase non-catalytic subunit
            trm6 [Medicago truncatula]
          Length = 457

 Score =  539 bits (1389), Expect = e-151
 Identities = 285/481 (59%), Positives = 352/481 (73%), Gaps = 8/481 (1%)
 Frame = +1

Query: 19   CTSSSS--RITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLVPLIGCPFGSTFQ 192
            C+S ++  R+TWEGCSVLLDINDGDRLVFARLS ++ LKIG+K CSL PLIGCPFG+ FQ
Sbjct: 2    CSSENNKKRVTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQ 61

Query: 193  LDSTESSAPYLSRILVENNNQGDIDVVEGKNEVEIKE-----ESRDNRALVDNNSAQSLS 357
            LD++   AP+LS    + N     D+ +G+ + E K+     E RDNR+L+DNN+AQSL+
Sbjct: 62   LDTSSDGAPFLSPFQPKGNINNTEDIKDGRFQAESKDGPLTGELRDNRSLIDNNTAQSLT 121

Query: 358  GQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARS 537
            G+DI+ +RRQGA GD+I+EALIANS+TF+KKT FSQEKYR++KQKKYAP+VL+RRP ARS
Sbjct: 122  GEDIEDMRRQGAKGDEIIEALIANSATFDKKTSFSQEKYRLKKQKKYAPKVLIRRPVARS 181

Query: 538  ICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYV 717
            ICEAYF K+P +IG+LR+DTLSLLLSMANVS  SD+LVVDMVGG+LTGAVAERLGGTG+V
Sbjct: 182  ICEAYFMKHPLKIGFLRVDTLSLLLSMANVSSNSDILVVDMVGGLLTGAVAERLGGTGFV 241

Query: 718  CNTYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXX 897
            CN+Y G     MDIVR        C  IVRS  SDL                        
Sbjct: 242  CNSYLGKAP-SMDIVRIFNLSDEICKRIVRSSISDL-----------------------L 277

Query: 898  GDESSSPPLFKLEAVVIQNQVSSPSCLH-SVSNAHPSFLSGNENLGPALTTFMDETDSSS 1074
              + SS    K +   +++Q+++  C   S+     S  +G  +LG A      E+ +  
Sbjct: 278  SQKESSQQNPKHDDGSVESQLNNQMCASVSMEEISHSSENGISDLG-ADNAENIESSTFP 336

Query: 1075 VSRVCKPTKSGVKATQEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYH 1254
              R CK  K+G KA+QE+I+ WK +GFSSLIIAAP+LDTW+ ++DLLPLLS SAPFA+YH
Sbjct: 337  ALRACKAIKAGEKASQEIIDSWKENGFSSLIIAAPDLDTWTLIKDLLPLLSNSAPFAIYH 396

Query: 1255 QYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICS 1434
            QYLQPL TCMHNLQ+ K+AIGLQI+EPWLREYQVLPSRTHPCMQMSAFGGYILSG KICS
Sbjct: 397  QYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICS 456

Query: 1435 T 1437
            +
Sbjct: 457  S 457


>ref|XP_004152653.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
            subunit trm6-like [Cucumis sativus]
            gi|449521762|ref|XP_004167898.1| PREDICTED: tRNA
            (adenine(58)-N(1))-methyltransferase non-catalytic
            subunit trm6-like [Cucumis sativus]
          Length = 448

 Score =  517 bits (1331), Expect = e-144
 Identities = 281/470 (59%), Positives = 334/470 (71%), Gaps = 2/470 (0%)
 Frame = +1

Query: 37   RITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLVPLIGCPFGSTFQLDSTESSA 216
            R+TWEGCSVLLD+NDGDRLVFARLS +STLKIG+K  SL PLIGCPFGS FQ+++   + 
Sbjct: 15   RLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPFGSLFQIENG-GNG 73

Query: 217  PYLSRILVENNNQGDI--DVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQDIDALRRQG 390
            P L+R++     +G    +  E K E   K+E RDNRA+VDNN AQSLS +DIDA+R QG
Sbjct: 74   PELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQSLSSEDIDAMRSQG 133

Query: 391  ATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPA 570
            ATGD+IVEALIANS+TF+KKT+FSQEKYR++KQKKYAPRVLLRRPF RSICEAYFKKYPA
Sbjct: 134  ATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKYPA 193

Query: 571  RIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYP 750
            RIG+LR+D LSLLLS  NV+  SDVLVVDMVGG+LTGAVAERLGG G VCNTY G T  P
Sbjct: 194  RIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSVCNTYVGNTPNP 253

Query: 751  MDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESSSPPLFK 930
            MDIVR        CS I+RS  +DL    S+ +E                 E +S P+  
Sbjct: 254  MDIVRIFNFDDEICSRIMRSSLADL---TSSQIE------PTKPNGENEDSEQASQPVSM 304

Query: 931  LEAVVIQNQVSSPSCLHSVSNAHPSFLSGNENLGPALTTFMDETDSSSVSRVCKPTKSGV 1110
             E+ +     SS   L+S S   P                        +++V K  K+G 
Sbjct: 305  DESPLPSTDQSSD--LNSESIVSP------------------------LTKVFKCAKAGD 338

Query: 1111 KATQEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHN 1290
            KA  EVINLWK +GF+SLIIAAP+ D WS ++DLLPL++ SAPFA+YHQY+QPL TCMH 
Sbjct: 339  KAPPEVINLWKENGFTSLIIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHK 398

Query: 1291 LQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICSTE 1440
            LQ+ K+AI LQISEPWLREYQVLPSRTHP MQM+AFGGYILSG KIC  +
Sbjct: 399  LQLEKMAISLQISEPWLREYQVLPSRTHPFMQMNAFGGYILSGTKICDRQ 448


>ref|XP_002307715.1| predicted protein [Populus trichocarpa] gi|222857164|gb|EEE94711.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  516 bits (1329), Expect = e-144
 Identities = 278/479 (58%), Positives = 338/479 (70%), Gaps = 1/479 (0%)
 Frame = +1

Query: 4    NNVEKCTSSSSRITWEGCSVLLDINDGDRLVFARLSNSSTLKIGDKKCSLVPLIGCPFGS 183
            NN++  +  + R+TWEGCSVLLDINDGDRLVFARL+  STLKIG KK SL PLIGCPFGS
Sbjct: 4    NNIQSDSVQNPRVTWEGCSVLLDINDGDRLVFARLTAGSTLKIGKKKYSLRPLIGCPFGS 63

Query: 184  TFQLDSTESSAPYLSRILVENNNQGDIDVVEGKNEVEIKEESRDNRALVDNNSAQSLSGQ 363
            +FQ+++  +  PYLSR          I   E +   +I +E +DNRA+VDNN AQ+L+ +
Sbjct: 64   SFQIENG-TEGPYLSRF---------IPSTEEREGCQIVDECKDNRAIVDNNEAQTLTSE 113

Query: 364  DIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSIC 543
            DID +RRQGA GD+I+EALIANS+TFEKKT FSQEKYRI+KQKKYAPRVLLRRP ARSIC
Sbjct: 114  DIDEMRRQGAKGDEIIEALIANSATFEKKTAFSQEKYRIKKQKKYAPRVLLRRPSARSIC 173

Query: 544  EAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCN 723
            EAYFKKYP RIG+LR+D LSLLLS+ANVS  SD+L+VDMVGG+LTGAVAERLGGTG VCN
Sbjct: 174  EAYFKKYPNRIGFLRVDVLSLLLSLANVSANSDILLVDMVGGLLTGAVAERLGGTGCVCN 233

Query: 724  TYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGD 903
            TY G T  P++IVR        C  IVR+P  DLC                        D
Sbjct: 234  TYLGSTPSPVEIVRTFNFNNEICKRIVRAPLHDLC-----------------------SD 270

Query: 904  ESSSPPLFKLEAVVIQNQVSSPSCLHSVSNAHPSFLSGNENLGPALTTFMD-ETDSSSVS 1080
            ++ +  +               SC ++  N   S +S  E   P+     D +T  S  S
Sbjct: 271  QTGTKKI--------------DSC-NAELNVQISTISIEEMPLPSKHEAADSQTIVSPQS 315

Query: 1081 RVCKPTKSGVKATQEVINLWKASGFSSLIIAAPELDTWSTLQDLLPLLSYSAPFAVYHQY 1260
            ++ K  K+G KA++E +  WK +GFSSLIIAAP+ D W+ ++ LLPL+SYSAPFA+YHQY
Sbjct: 316  KMGKAPKAGEKASEEALKSWKENGFSSLIIAAPDADAWNLVKVLLPLISYSAPFAIYHQY 375

Query: 1261 LQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICST 1437
            LQPL TCMHNLQ +K+AIG+QISEPWLREYQVLPSRT P MQMS+FGGYILSG KICS+
Sbjct: 376  LQPLATCMHNLQQSKMAIGMQISEPWLREYQVLPSRTRPSMQMSSFGGYILSGTKICSS 434