BLASTX nr result
ID: Coptis23_contig00009915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00009915
(1046 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145520.1| PREDICTED: neurochondrin-like [Cucumis sativ... 135 1e-29
ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera] 130 7e-28
emb|CBI21102.3| unnamed protein product [Vitis vinifera] 130 7e-28
ref|XP_003519041.1| PREDICTED: neurochondrin-like [Glycine max] 126 1e-26
ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max] 126 1e-26
>ref|XP_004145520.1| PREDICTED: neurochondrin-like [Cucumis sativus]
gi|449485155|ref|XP_004157084.1| PREDICTED:
neurochondrin-like [Cucumis sativus]
Length = 634
Score = 135 bits (341), Expect = 1e-29
Identities = 75/142 (52%), Positives = 91/142 (64%)
Frame = -1
Query: 896 GNYIDENTIMKVIKGLNETIGLVLKFLQDAKEHGQRKGSDILASVRVVGKSAHIHFLKGS 717
G+ I ENT+MKVI+GLNET G+VL++LQDAKEHGQRKG DILASVRV+G
Sbjct: 369 GDLISENTLMKVIRGLNETTGVVLEYLQDAKEHGQRKGDDILASVRVIG----------- 417
Query: 716 TIRSQMV*DTATTIEF*ATWPSHXXXXXXVQELLECILSVEGEDESSPFYSVCFMLPLLC 537
F A P V ELL+ +LSVEGEDE SPF SVCF+LP+LC
Sbjct: 418 --------------SFLAQTPD--AWAERVTELLDYMLSVEGEDEQSPFNSVCFLLPMLC 461
Query: 536 QITMETEGCRILASNKGLEPIL 471
QITM EGC+ L S++GL ++
Sbjct: 462 QITMNVEGCKTLVSSRGLAAVV 483
>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
Length = 629
Score = 130 bits (326), Expect = 7e-28
Identities = 68/141 (48%), Positives = 93/141 (65%)
Frame = -1
Query: 893 NYIDENTIMKVIKGLNETIGLVLKFLQDAKEHGQRKGSDILASVRVVGKSAHIHFLKGST 714
N IDENT+ KVI GLNET+G+VL++LQDAK+HGQ+KG D+LASVR++G +L +
Sbjct: 366 NPIDENTLSKVISGLNETVGVVLEYLQDAKDHGQKKGDDLLASVRLIGS-----YLAETP 420
Query: 713 IRSQMV*DTATTIEF*ATWPSHXXXXXXVQELLECILSVEGEDESSPFYSVCFMLPLLCQ 534
+ + V+ELLE +LS+EGEDE PF+S+CF+LP+LCQ
Sbjct: 421 LACR----------------------EKVRELLEFMLSIEGEDEPRPFFSICFLLPMLCQ 458
Query: 533 ITMETEGCRILASNKGLEPIL 471
ITME EGC+IL S G + ++
Sbjct: 459 ITMEIEGCKILVSCGGQKAVV 479
Score = 63.9 bits (154), Expect = 6e-08
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = -3
Query: 465 DPSFIMMASSICTLIFDSTSEEALLSRPDFKLSTQNSLARLIAKGLRTSGQDQMSDDAKA 286
+PS +MMASSIC LIFD TSE+ALL+ P+ ST SL++LI + L T Q+ M DD K+
Sbjct: 541 EPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCAQN-MGDDMKS 599
Query: 285 EGD 277
+ D
Sbjct: 600 DLD 602
>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
Length = 713
Score = 130 bits (326), Expect = 7e-28
Identities = 68/141 (48%), Positives = 93/141 (65%)
Frame = -1
Query: 893 NYIDENTIMKVIKGLNETIGLVLKFLQDAKEHGQRKGSDILASVRVVGKSAHIHFLKGST 714
N IDENT+ KVI GLNET+G+VL++LQDAK+HGQ+KG D+LASVR++G +L +
Sbjct: 450 NPIDENTLSKVISGLNETVGVVLEYLQDAKDHGQKKGDDLLASVRLIGS-----YLAETP 504
Query: 713 IRSQMV*DTATTIEF*ATWPSHXXXXXXVQELLECILSVEGEDESSPFYSVCFMLPLLCQ 534
+ + V+ELLE +LS+EGEDE PF+S+CF+LP+LCQ
Sbjct: 505 LACR----------------------EKVRELLEFMLSIEGEDEPRPFFSICFLLPMLCQ 542
Query: 533 ITMETEGCRILASNKGLEPIL 471
ITME EGC+IL S G + ++
Sbjct: 543 ITMEIEGCKILVSCGGQKAVV 563
Score = 63.9 bits (154), Expect = 6e-08
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = -3
Query: 465 DPSFIMMASSICTLIFDSTSEEALLSRPDFKLSTQNSLARLIAKGLRTSGQDQMSDDAKA 286
+PS +MMASSIC LIFD TSE+ALL+ P+ ST SL++LI + L T Q+ M DD K+
Sbjct: 625 EPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCAQN-MGDDMKS 683
Query: 285 EGD 277
+ D
Sbjct: 684 DLD 686
>ref|XP_003519041.1| PREDICTED: neurochondrin-like [Glycine max]
Length = 621
Score = 126 bits (316), Expect = 1e-26
Identities = 68/142 (47%), Positives = 91/142 (64%)
Frame = -1
Query: 896 GNYIDENTIMKVIKGLNETIGLVLKFLQDAKEHGQRKGSDILASVRVVGKSAHIHFLKGS 717
GN +DE T+ K+I LNETI +VL++L+DAKEHGQ+KG D+LASVR++G +L +
Sbjct: 363 GNLLDEGTLTKLIHQLNETIAVVLEYLEDAKEHGQKKGDDLLASVRIIGS-----YLAEA 417
Query: 716 TIRSQMV*DTATTIEF*ATWPSHXXXXXXVQELLECILSVEGEDESSPFYSVCFMLPLLC 537
+ + VQ+LL +LS+EGEDE PFY+VCF+LP+L
Sbjct: 418 PVACK----------------------EKVQDLLGYMLSLEGEDEQRPFYAVCFLLPMLS 455
Query: 536 QITMETEGCRILASNKGLEPIL 471
QITME EGC+ LAS KGLE +L
Sbjct: 456 QITMEIEGCKALASCKGLEAVL 477
Score = 60.1 bits (144), Expect = 9e-07
Identities = 34/54 (62%), Positives = 39/54 (72%)
Frame = -3
Query: 459 SFIMMASSICTLIFDSTSEEALLSRPDFKLSTQNSLARLIAKGLRTSGQDQMSD 298
S +MMASSICTLIFD TSEEALL+ PDF T +SL LIA+ L +S QD D
Sbjct: 541 SSMMMASSICTLIFDYTSEEALLNCPDFDYRTLSSLYLLIARCLASSEQDTKVD 594
>ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]
Length = 616
Score = 126 bits (316), Expect = 1e-26
Identities = 68/142 (47%), Positives = 91/142 (64%)
Frame = -1
Query: 896 GNYIDENTIMKVIKGLNETIGLVLKFLQDAKEHGQRKGSDILASVRVVGKSAHIHFLKGS 717
GN +DE T+ K+I LNETI +VL++L+DAKEHGQ+KG D+LASVR++G +L +
Sbjct: 358 GNLLDEGTLTKLIHQLNETIAVVLEYLEDAKEHGQKKGDDLLASVRIIGS-----YLAEA 412
Query: 716 TIRSQMV*DTATTIEF*ATWPSHXXXXXXVQELLECILSVEGEDESSPFYSVCFMLPLLC 537
+ + VQ+LL +LS+EGEDE PFY+VCF+LP+L
Sbjct: 413 PVACK----------------------EKVQDLLGYMLSLEGEDEQRPFYAVCFLLPMLS 450
Query: 536 QITMETEGCRILASNKGLEPIL 471
QITME EGC+ LAS KGLE +L
Sbjct: 451 QITMEIEGCKALASCKGLEAVL 472
Score = 59.3 bits (142), Expect = 2e-06
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -3
Query: 459 SFIMMASSICTLIFDSTSEEALLSRPDFKLSTQNSLARLIAKGLRTSGQD 310
S +MMASSICTLIFD TSEEALL+ PDF T +SL LIA+ L +S QD
Sbjct: 536 SSMMMASSICTLIFDYTSEEALLNCPDFDYRTLSSLYLLIARCLASSEQD 585