BLASTX nr result

ID: Coptis23_contig00009908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009908
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK64817.1| translation elongation factor 2 [Prunus persica]       181   5e-62
ref|XP_002310687.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-61
ref|XP_002310106.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-61
ref|XP_004143180.1| PREDICTED: elongation factor 2-like [Cucumis...   181   1e-61
ref|XP_004145803.1| PREDICTED: elongation factor 2-like [Cucumis...   181   1e-61

>gb|AFK64817.1| translation elongation factor 2 [Prunus persica]
          Length = 843

 Score =  181 bits (459), Expect(2) = 5e-62
 Identities = 100/174 (57%), Positives = 127/174 (72%), Gaps = 18/174 (10%)
 Frame = -1

Query: 797 SEEVR*IMDMKDDIRNIAVIAHVDHGKT-----LVGSAG--GQDTSRDVRVTLTRADQAE 639
           +EE+R IMD K +IRN++VIAHVDHGK+     LV +AG   Q+ + DVR+T TRAD+AE
Sbjct: 6   AEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAE 65

Query: 638 HRTTTKATAFSFNYELSDKS-----------RYLINLIDSPDHIDFSSEVSAAFGMTDGA 492
              T K+T  S  YE++D++            YLINLIDSP H+DFSSEV+AA  +TDGA
Sbjct: 66  RGITIKSTGISLYYEMTDEALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGA 125

Query: 491 LLVVDGIEGVCMQTETVLCQSLGELVVPVLAINKMDRFIVDLQLDGEEAYQMIQ 330
           L+VVD IEGVC+QTETVL Q+LGE + PVL +NKMDR  ++LQ+DGEEAYQ  Q
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQ 179



 Score = 84.0 bits (206), Expect(2) = 5e-62
 Identities = 60/160 (37%), Positives = 72/160 (45%), Gaps = 53/160 (33%)
 Frame = -2

Query: 322 VMDANVIMATNESQLDGDSLFCPEKGSVAFCSGL-------------------------- 221
           + +ANVIMAT E  L GD    PEKG+VAF +GL                          
Sbjct: 182 IENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMM 241

Query: 220 ---------------------------RGFVQFVYDPIKKIINSCXXXXXXXXXXXXXXX 122
                                      RGFVQF Y+PIK+IIN+C               
Sbjct: 242 ERLWGENYFDPATKKWTSKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKEKLWPMLTKL 301

Query: 121 NITMKEDEKDQLHGIDLMLCVMRTWLPASTALLKMMIHHL 2
            +TMK DEK+ L G  LM  VM+TWLPAS+ALL+MMI HL
Sbjct: 302 GVTMKSDEKE-LMGKGLMKRVMQTWLPASSALLEMMIFHL 340


>ref|XP_002310687.1| predicted protein [Populus trichocarpa] gi|222853590|gb|EEE91137.1|
           predicted protein [Populus trichocarpa]
          Length = 843

 Score =  181 bits (458), Expect(2) = 1e-61
 Identities = 100/171 (58%), Positives = 126/171 (73%), Gaps = 18/171 (10%)
 Frame = -1

Query: 797 SEEVR*IMDMKDDIRNIAVIAHVDHGKT-----LVGSAG--GQDTSRDVRVTLTRADQAE 639
           +EE+R IMD K +IRN++VIAHVDHGK+     LV +AG   Q+ + DVR+T TRAD+AE
Sbjct: 6   AEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAE 65

Query: 638 HRTTTKATAFSFNYELSDKS-----------RYLINLIDSPDHIDFSSEVSAAFGMTDGA 492
              T K+T  S  YE+SD+S            YLINLIDSP H+DFSSEV+AA  +TDGA
Sbjct: 66  RGITIKSTGISLYYEMSDESLKRYKGERHGNEYLINLIDSPGHVDFSSEVTAALRITDGA 125

Query: 491 LLVVDGIEGVCMQTETVLCQSLGELVVPVLAINKMDRFIVDLQLDGEEAYQ 339
           L+VVD IEGVC+QTETVL Q+LGE + PVL +NKMDR  ++LQ+DGEEA+Q
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAFQ 176



 Score = 83.2 bits (204), Expect(2) = 1e-61
 Identities = 60/160 (37%), Positives = 70/160 (43%), Gaps = 53/160 (33%)
 Frame = -2

Query: 322 VMDANVIMATNESQLDGDSLFCPEKGSVAFCSGL-------------------------- 221
           + +ANVIMAT E  L GD    PEKG+VAF +GL                          
Sbjct: 182 IENANVIMATYEDPLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAQMYASKFGVDESKMM 241

Query: 220 ---------------------------RGFVQFVYDPIKKIINSCXXXXXXXXXXXXXXX 122
                                      RGFVQF Y+PIK+II +C               
Sbjct: 242 ERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKQIIKTCMNDQKDKLWPMLQKL 301

Query: 121 NITMKEDEKDQLHGIDLMLCVMRTWLPASTALLKMMIHHL 2
            + MK DEKD L G  LM  VM+TWLPASTALL+MMI HL
Sbjct: 302 GVVMKSDEKD-LMGKPLMKRVMQTWLPASTALLEMMIFHL 340


>ref|XP_002310106.1| predicted protein [Populus trichocarpa] gi|222853009|gb|EEE90556.1|
           predicted protein [Populus trichocarpa]
          Length = 843

 Score =  181 bits (458), Expect(2) = 1e-61
 Identities = 100/171 (58%), Positives = 126/171 (73%), Gaps = 18/171 (10%)
 Frame = -1

Query: 797 SEEVR*IMDMKDDIRNIAVIAHVDHGKT-----LVGSAG--GQDTSRDVRVTLTRADQAE 639
           +EE+R IMD K +IRN++VIAHVDHGK+     LV +AG   Q+ + DVR+T TRAD+AE
Sbjct: 6   AEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAE 65

Query: 638 HRTTTKATAFSFNYELSDKS-----------RYLINLIDSPDHIDFSSEVSAAFGMTDGA 492
              T K+T  S  YE+SD+S            YLINLIDSP H+DFSSEV+AA  +TDGA
Sbjct: 66  RGITIKSTGISLYYEMSDESLKRFKGERHGNEYLINLIDSPGHVDFSSEVTAALRITDGA 125

Query: 491 LLVVDGIEGVCMQTETVLCQSLGELVVPVLAINKMDRFIVDLQLDGEEAYQ 339
           L+VVD IEGVC+QTETVL Q+LGE + PVL +NKMDR  ++LQ+DGEEA+Q
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAFQ 176



 Score = 83.2 bits (204), Expect(2) = 1e-61
 Identities = 60/160 (37%), Positives = 70/160 (43%), Gaps = 53/160 (33%)
 Frame = -2

Query: 322 VMDANVIMATNESQLDGDSLFCPEKGSVAFCSGL-------------------------- 221
           + +ANVIMAT E  L GD    PEKG+VAF +GL                          
Sbjct: 182 IENANVIMATYEDPLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAQMYASKFGVDESKMM 241

Query: 220 ---------------------------RGFVQFVYDPIKKIINSCXXXXXXXXXXXXXXX 122
                                      RGFVQF Y+PIK+II +C               
Sbjct: 242 ERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKQIIKTCMNDQKDKLWPMLQKL 301

Query: 121 NITMKEDEKDQLHGIDLMLCVMRTWLPASTALLKMMIHHL 2
            + MK DEKD L G  LM  VM+TWLPASTALL+MMI HL
Sbjct: 302 GVVMKSDEKD-LMGKPLMKRVMQTWLPASTALLEMMIFHL 340


>ref|XP_004143180.1| PREDICTED: elongation factor 2-like [Cucumis sativus]
          Length = 843

 Score =  181 bits (460), Expect(2) = 1e-61
 Identities = 101/174 (58%), Positives = 126/174 (72%), Gaps = 18/174 (10%)
 Frame = -1

Query: 797 SEEVR*IMDMKDDIRNIAVIAHVDHGKT-----LVGSAG--GQDTSRDVRVTLTRADQAE 639
           +EE+R IMD K +IRN++VIAHVDHGK+     LV +AG   Q+ + DVR+T TR D+AE
Sbjct: 6   AEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAE 65

Query: 638 HRTTTKATAFSFNYELSDKS-----------RYLINLIDSPDHIDFSSEVSAAFGMTDGA 492
              T K+T  S  YE+SD+S            YLINLIDSP H+DFSSEV+AA  +TDGA
Sbjct: 66  RGITIKSTGISLYYEMSDESLKSYKGERHGNEYLINLIDSPGHVDFSSEVTAALRITDGA 125

Query: 491 LLVVDGIEGVCMQTETVLCQSLGELVVPVLAINKMDRFIVDLQLDGEEAYQMIQ 330
           L+VVD IEGVC+QTETVL Q+LGE + PVL +NKMDR  ++LQ+DGEEAYQ  Q
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQ 179



 Score = 82.0 bits (201), Expect(2) = 1e-61
 Identities = 60/160 (37%), Positives = 70/160 (43%), Gaps = 53/160 (33%)
 Frame = -2

Query: 322 VMDANVIMATNESQLDGDSLFCPEKGSVAFCSGL-------------------------- 221
           + +ANVIMAT E  L GD    PEKG+VAF +GL                          
Sbjct: 182 IENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMM 241

Query: 220 ---------------------------RGFVQFVYDPIKKIINSCXXXXXXXXXXXXXXX 122
                                      RGFVQF Y+PIK+II +C               
Sbjct: 242 ERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDRKDKLWPMLQKL 301

Query: 121 NITMKEDEKDQLHGIDLMLCVMRTWLPASTALLKMMIHHL 2
            + MK DEKD L G  LM  VM+TWLPASTALL+MMI HL
Sbjct: 302 GVVMKSDEKD-LMGKPLMKRVMQTWLPASTALLEMMIFHL 340


>ref|XP_004145803.1| PREDICTED: elongation factor 2-like [Cucumis sativus]
          Length = 793

 Score =  181 bits (460), Expect(2) = 1e-61
 Identities = 101/174 (58%), Positives = 126/174 (72%), Gaps = 18/174 (10%)
 Frame = -1

Query: 797 SEEVR*IMDMKDDIRNIAVIAHVDHGKT-----LVGSAG--GQDTSRDVRVTLTRADQAE 639
           +EE+R IMD K +IRN++VIAHVDHGK+     LV +AG   Q+ + DVR+T TR D+AE
Sbjct: 6   AEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAE 65

Query: 638 HRTTTKATAFSFNYELSDKS-----------RYLINLIDSPDHIDFSSEVSAAFGMTDGA 492
              T K+T  S  YE+SD+S            YLINLIDSP H+DFSSEV+AA  +TDGA
Sbjct: 66  RGITIKSTGISLYYEMSDESLKSYKGERHGNEYLINLIDSPGHVDFSSEVTAALRITDGA 125

Query: 491 LLVVDGIEGVCMQTETVLCQSLGELVVPVLAINKMDRFIVDLQLDGEEAYQMIQ 330
           L+VVD IEGVC+QTETVL Q+LGE + PVL +NKMDR  ++LQ+DGEEAYQ  Q
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQ 179



 Score = 82.0 bits (201), Expect(2) = 1e-61
 Identities = 60/160 (37%), Positives = 70/160 (43%), Gaps = 53/160 (33%)
 Frame = -2

Query: 322 VMDANVIMATNESQLDGDSLFCPEKGSVAFCSGL-------------------------- 221
           + +ANVIMAT E  L GD    PEKG+VAF +GL                          
Sbjct: 182 IENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMM 241

Query: 220 ---------------------------RGFVQFVYDPIKKIINSCXXXXXXXXXXXXXXX 122
                                      RGFVQF Y+PIK+II +C               
Sbjct: 242 ERLWGENFFDPATKKWTSKNTGTATCKRGFVQFCYEPIKQIIATCMNDRKDKLWPMLQKL 301

Query: 121 NITMKEDEKDQLHGIDLMLCVMRTWLPASTALLKMMIHHL 2
            + MK DEKD L G  LM  VM+TWLPASTALL+MMI HL
Sbjct: 302 GVVMKSDEKD-LMGKPLMKRVMQTWLPASTALLEMMIFHL 340


Top