BLASTX nr result

ID: Coptis23_contig00009905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009905
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    72   3e-10
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    64   9e-08
dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]              62   5e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              61   6e-07
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   6e-07

>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
            gi|355478601|gb|AES59804.1| hypothetical protein
            MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 42/146 (28%), Positives = 69/146 (47%)
 Frame = +1

Query: 958  SLIGKIFLDTERNPNEIMRAIRQKWNLRKKLDIVAVGENKFILSFEKDMEKLKILKDQPW 1137
            +L+GKI+ D   N     + + Q W L+  ++I  + +N F+  F    +   IL+  PW
Sbjct: 33   TLVGKIWTDVPYNVRAFKQTMIQAWRLKNTVEIQDLNKNLFLFKFSSRRDAENILQSGPW 92

Query: 1138 QILGFLFVLKPYSPEMIPQQIDFTIQEFWITFEGLLLEHQLPPIIKLIASHAGKVLKVFP 1317
                 L +L   S E  P ++D    +FW+    L L+ +   + K I    GK L+V P
Sbjct: 93   SFDRNLLILDTISGEEQPSELDLHTVQFWVRIYDLPLKLRYDLMAKKIGDLVGKFLEVDP 152

Query: 1318 PDNSPREDDGYKARVEVDLTKPFCQG 1395
             DN+ R     + +V +DL  P  +G
Sbjct: 153  RDNN-RMGKSIRIKVAIDLRNPLKRG 177


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 38/144 (26%), Positives = 65/144 (45%)
 Frame = +1

Query: 943  ARWISSLIGKIFLDTERNPNEIMRAIRQKWNLRKKLDIVAVGENKFILSFEKDMEKLKIL 1122
            A W  SLI K+ L  +         + + W+L   +DI+ +G   F+L F    + +K+ 
Sbjct: 98   APWKYSLIAKV-LGRKVGLQYCQAHLHRLWSLEGTVDIIDLGYGFFLLKFSLPTDYIKVF 156

Query: 1123 KDQPWQILGFLFVLKPYSPEMIPQQIDFTIQEFWITFEGLLLEHQLPPIIKLIASHAGKV 1302
            K  PW I G+   L+P+ P   P +   T  + W+    L +E+    ++  I +  G+ 
Sbjct: 157  KGVPWLIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVLLQIGAAIGRT 216

Query: 1303 LKVFPPDNSPREDDGYKARVEVDL 1374
            +K+ P           +  VEVDL
Sbjct: 217  IKIDPITEKQARGRFARMCVEVDL 240


>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 37/145 (25%), Positives = 66/145 (45%)
 Frame = +1

Query: 949  WISSLIGKIFLDTERNPNEIMRAIRQKWNLRKKLDIVAVGENKFILSFEKDMEKLKILKD 1128
            W  +LI K +L      N + +     W L+ ++ I+ +G   F++ F+   + L +L D
Sbjct: 100  WRMALIVK-YLGKNLTANVLNQRAPSLWQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLD 158

Query: 1129 QPWQILGFLFVLKPYSPEMIPQQIDFTIQEFWITFEGLLLEHQLPPIIKLIASHAGKVLK 1308
             PW+I     + + + P   P+   F     W+    L +E+     IK I  + GK L+
Sbjct: 159  GPWKIFDNYLITQRWVPNFEPRTAKFQKMAVWVRLPELSMEYFRDDTIKAILENIGKPLR 218

Query: 1309 VFPPDNSPREDDGYKARVEVDLTKP 1383
            +     +  +    +A VE+DL KP
Sbjct: 219  LDRTTMAREKGRFARAAVEIDLGKP 243


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 37/145 (25%), Positives = 65/145 (44%)
 Frame = +1

Query: 949  WISSLIGKIFLDTERNPNEIMRAIRQKWNLRKKLDIVAVGENKFILSFEKDMEKLKILKD 1128
            W  +LI K +L      N + +     W L+ ++ I+ +G   F++ F+   + L +L D
Sbjct: 100  WRMALIVK-YLGKNLTANVLNQRAPSLWQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLD 158

Query: 1129 QPWQILGFLFVLKPYSPEMIPQQIDFTIQEFWITFEGLLLEHQLPPIIKLIASHAGKVLK 1308
             PW+I     + + + P+  P+   F     W+    L +E+     IK I  + GK L 
Sbjct: 159  GPWRIFDNYLITQRWVPDFKPRTAKFQKMAVWVRLSELSMEYFRDDTIKAILENIGKPLG 218

Query: 1309 VFPPDNSPREDDGYKARVEVDLTKP 1383
            +     +       +A VE+DL KP
Sbjct: 219  LDRTTMARERGRFARAAVEIDLDKP 243


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
 Frame = +1

Query: 949  WISSLIGKIFLDTERNPNEIMRAIRQKWNLRKKLDIVAVGENKFILSFEKDMEKLKILKD 1128
            W ++L+GK+ L    + N ++  + + W    K++++ +G + F+  F    +  K L  
Sbjct: 122  WRNTLMGKV-LGMSISRNFLVERVNRIWKTNDKVEVIDLGHDVFLFKFNNGNDMEKALFG 180

Query: 1129 QPWQILGFLFVLKPYSPEMIPQQIDFTIQEFWITFEGLLLEHQLPPIIKLIASHAGKVLK 1308
             PW IL    +L  + P+  P Q  F     WI F  L LE+     +  IA   GK +K
Sbjct: 181  GPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGKVGKPIK 240

Query: 1309 V-FPPDNSPREDDGYKARV--EVDLTK 1380
            V +  D+  R   G  ARV  E+DL K
Sbjct: 241  VDYATDHMAR---GRYARVCIELDLAK 264


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