BLASTX nr result

ID: Coptis23_contig00009903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009903
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8LPB4.1|PSKR1_DAUCA RecName: Full=Phytosulfokine receptor 1;...    57   1e-06

>sp|Q8LPB4.1|PSKR1_DAUCA RecName: Full=Phytosulfokine receptor 1; Short=DcPSKR1; AltName:
           Full=Phytosulfokine LRR receptor kinase 1; Flags:
           Precursor gi|21623969|dbj|BAC00995.1| phytosulfokine
           receptor [Daucus carota]
          Length = 1021

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 286 LKTLILSQNQLAGSLSDFAKVLTNLSNLEVLDLSWNNLDD-FPDLRNMSKLKILNVSHNN 110
           LK L L+ N L+GS+   A  L NLSNLEVLDLS N+    FP L N+  L++LNV  N+
Sbjct: 112 LKVLNLTHNSLSGSI---AASLLNLSNLEVLDLSSNDFSGLFPSLINLPSLRVLNVYENS 168

Query: 109 FLGRIP 92
           F G IP
Sbjct: 169 FHGLIP 174


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