BLASTX nr result

ID: Coptis23_contig00009901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009901
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565372.1| PREDICTED: receptor-like protein 12-like [Br...    62   5e-08
ref|XP_002457294.1| hypothetical protein SORBIDRAFT_03g005070 [S...    61   8e-08
ref|NP_001173802.1| Os04g0226340 [Oryza sativa Japonica Group] g...    60   1e-07
gb|EEE60352.1| hypothetical protein OsJ_13470 [Oryza sativa Japo...    60   1e-07
ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_003565372.1| PREDICTED: receptor-like protein 12-like [Brachypodium distachyon]
          Length = 901

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/82 (41%), Positives = 44/82 (53%)
 Frame = -1

Query: 257 KILNVSNNNFLGRIPPSIXXXXXXXXXXXXETNIKEDSISNLRNLSMLKILDLSWNNFSG 78
           K+++ SNN+F G IP SI              N +    S L NLS L+ LDLSWN  SG
Sbjct: 726 KVIDFSNNSFDGPIPKSIGRLVSLHGLNMSHNNFEGQIPSRLSNLSQLEALDLSWNKLSG 785

Query: 77  RIPPSILSLNSLEALSLRLTNI 12
            IP  + S+ SLE L+L   N+
Sbjct: 786 EIPQDLTSVTSLEWLNLSYNNL 807


>ref|XP_002457294.1| hypothetical protein SORBIDRAFT_03g005070 [Sorghum bicolor]
            gi|241929269|gb|EES02414.1| hypothetical protein
            SORBIDRAFT_03g005070 [Sorghum bicolor]
          Length = 1075

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/82 (41%), Positives = 43/82 (52%)
 Frame = -1

Query: 257  KILNVSNNNFLGRIPPSIXXXXXXXXXXXXETNIKEDSISNLRNLSMLKILDLSWNNFSG 78
            K ++ SNN+F G IP SI              N  E   S   NL+ L+ LDLSWN+FSG
Sbjct: 894  KAIDFSNNSFYGPIPASIGRLSSLHGINMSHNNFTEQIPSQFGNLTCLESLDLSWNHFSG 953

Query: 77   RIPPSILSLNSLEALSLRLTNI 12
             IP  + SL SL  L+L   N+
Sbjct: 954  EIPEELTSLTSLAWLNLSYNNL 975


>ref|NP_001173802.1| Os04g0226340 [Oryza sativa Japonica Group]
           gi|255675237|dbj|BAH92530.1| Os04g0226340, partial
           [Oryza sativa Japonica Group]
          Length = 231

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = -1

Query: 266 SKLKILNVSNNNFLGRIPPSIXXXXXXXXXXXXETNIKEDSISNLRNLSMLKILDLSWNN 87
           S L +LN++NN F G IP S+              N     I N   +S L+IL+L+ NN
Sbjct: 122 SSLTVLNLTNNLFFGTIPASLFNGSSNLAIIDLRMNAFSGPIPNFYKMSALQILNLAQNN 181

Query: 86  FSGRIPPSILSLNSLEALSLRLTNIKDS 3
            SG IPPS+  ++S+  +SL + N++ S
Sbjct: 182 LSGSIPPSLGKVSSINLISLEMNNLEGS 209


>gb|EEE60352.1| hypothetical protein OsJ_13470 [Oryza sativa Japonica Group]
          Length = 394

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = -1

Query: 266 SKLKILNVSNNNFLGRIPPSIXXXXXXXXXXXXETNIKEDSISNLRNLSMLKILDLSWNN 87
           S L +LN++NN F G IP S+              N     I N   +S L+IL+L+ NN
Sbjct: 115 SSLTVLNLTNNLFFGTIPASLFNGSSNLAIIDLRMNAFSGPIPNFYKMSALQILNLAQNN 174

Query: 86  FSGRIPPSILSLNSLEALSLRLTNIKDS 3
            SG IPPS+  ++S+  +SL + N++ S
Sbjct: 175 LSGSIPPSLGKVSSINLISLEMNNLEGS 202


>ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|222834987|gb|EEE73436.1|
           predicted protein [Populus trichocarpa]
          Length = 1014

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = -1

Query: 266 SKLKILNVSNNNFLGRIPPSIXXXXXXXXXXXXETNIKEDSISNLRNLSMLKILDLSWNN 87
           ++L IL++S+NNF G+IPPS+              N       +LRNL+ L  LDLS NN
Sbjct: 410 TQLIILDLSSNNFSGQIPPSLSNLTQLIYLVLSSNNFSGQIPQSLRNLTQLTFLDLSSNN 469

Query: 86  FSGRIPPSILSLNSLEALSL 27
           F+G+IP S+ +L  L +L L
Sbjct: 470 FNGQIPSSLGNLVQLRSLYL 489


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