BLASTX nr result

ID: Coptis23_contig00009894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009894
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892799.1| binding protein [Arabidopsis lyrata subsp. l...   462   e-128
ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|1...   460   e-127
ref|XP_003551964.1| PREDICTED: protein FAM203A-like [Glycine max]     459   e-127
ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G027686...   456   e-126
ref|XP_004139650.1| PREDICTED: FAM203 family protein DDB_G027686...   453   e-125

>ref|XP_002892799.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338641|gb|EFH69058.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 339

 Score =  462 bits (1189), Expect = e-128
 Identities = 235/323 (72%), Positives = 280/323 (86%), Gaps = 1/323 (0%)
 Frame = +2

Query: 44   MATELEELLQFLSFPSPQVKKGAVDIVRDLTGSEDGLQALTYYSQIVFPSLSRLLAEDKE 223
            MATELEEL++FLS PSP VKK AV+IV  LTGSE+GLQ+L+ YS+I+ PSLSRLL E KE
Sbjct: 1    MATELEELVEFLSSPSPPVKKAAVEIVSGLTGSEEGLQSLSKYSEILLPSLSRLLNESKE 60

Query: 224  ISEPAAQALVNLSENSELSRKMIEVGITTTAMETLYKQQDANISRLIVMLLLNLTQLDEG 403
            +SEPAAQALVNLS+NSEL+RKMI++G+   AM+ LYK +   I+RL+VMLL+NLTQLD+G
Sbjct: 61   VSEPAAQALVNLSQNSELARKMIQMGLIKVAMDMLYKPESC-ITRLLVMLLVNLTQLDDG 119

Query: 404  VMSLLQTEDEKTLGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 580
            V SLLQ +DEK  G+H+MKLVRSFC +S E  +D FEHVGSILVNIS+ E+GRK +L+PK
Sbjct: 120  VSSLLQIDDEKMHGLHIMKLVRSFCRSSGETTDDQFEHVGSILVNISKTEDGRKLLLEPK 179

Query: 581  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 760
            RGLLKQIIRQFDST+ LRKKGV GTIRNCCFEA  QLQN+LL+SE+LWPALLLPVAG+K 
Sbjct: 180  RGLLKQIIRQFDSTNQLRKKGVAGTIRNCCFEAKNQLQNILLISEFLWPALLLPVAGSKT 239

Query: 761  YSEQDTSKMPPELGTALSIERESVDDPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 940
            YSEQD +KMPPELG+ALSIERE V DPDIRVQ LEA+YLIIL++AGRRA WSVNGPR+LQ
Sbjct: 240  YSEQDIAKMPPELGSALSIEREPVTDPDIRVQTLEAIYLIILEEAGRRAFWSVNGPRILQ 299

Query: 941  LGYEDEANGEVMEAYERIGSLLV 1009
            +GYE E + + M AYE++GSLLV
Sbjct: 300  VGYEYEEDPKAMRAYEQVGSLLV 322


>ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|118489595|gb|ABK96599.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222872270|gb|EEF09401.1| predicted protein [Populus
            trichocarpa]
          Length = 336

 Score =  460 bits (1183), Expect = e-127
 Identities = 236/325 (72%), Positives = 282/325 (86%), Gaps = 1/325 (0%)
 Frame = +2

Query: 44   MATELEELLQFLSFPSPQVKKGAVDIVRDLTGSEDGLQALTYYSQIVFPSLSRLLAEDKE 223
            MATELEEL+ FLS PSP VKK AV+IVRDLTGSEDGL +L+ Y+  V PSLS+LL E KE
Sbjct: 1    MATELEELVGFLSSPSPPVKKAAVEIVRDLTGSEDGLLSLSKYASTVLPSLSQLLKEKKE 60

Query: 224  ISEPAAQALVNLSENSELSRKMIEVGITTTAMETLYKQQDANISRLIVMLLLNLTQLDEG 403
            +SEPAA+AL+NLS NS L+ KM+E+G+  TAM+ LYK  D++I+RL+VMLL+NLTQLD G
Sbjct: 61   VSEPAAEALINLSLNSNLAAKMVEMGMIKTAMDVLYKP-DSSITRLLVMLLVNLTQLDSG 119

Query: 404  VMSLLQTEDEKTLGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 580
            ++SLLQ EDEK  G+ VMKLVRSF  +S+E  +DPF+HVGSILVNIS+ E GRK +LD K
Sbjct: 120  IVSLLQIEDEKMQGLFVMKLVRSFGRSSDETRDDPFDHVGSILVNISKKEAGRKMLLDSK 179

Query: 581  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 760
            RGLLKQI+RQFDSTS LRKKGV GT+RNCCFEA+ QLQN LL+SE+LWPALLLPVAG K+
Sbjct: 180  RGLLKQILRQFDSTSPLRKKGVSGTLRNCCFEAENQLQNFLLISEFLWPALLLPVAGKKI 239

Query: 761  YSEQDTSKMPPELGTALSIERESVDDPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 940
            YSEQDTSKMP ELG+ALSIERE  DDP+IRV+ALE++YLII+Q+AG RALWSVNGPR+LQ
Sbjct: 240  YSEQDTSKMPLELGSALSIEREPWDDPEIRVEALESIYLIIVQEAGLRALWSVNGPRILQ 299

Query: 941  LGYEDEANGEVMEAYERIGSLLVHG 1015
            +GYEDE + +VMEAYER+GSLLVHG
Sbjct: 300  VGYEDEEDPKVMEAYERVGSLLVHG 324


>ref|XP_003551964.1| PREDICTED: protein FAM203A-like [Glycine max]
          Length = 336

 Score =  459 bits (1181), Expect = e-127
 Identities = 233/326 (71%), Positives = 279/326 (85%), Gaps = 1/326 (0%)
 Frame = +2

Query: 44   MATELEELLQFLSFPSPQVKKGAVDIVRDLTGSEDGLQALTYYSQIVFPSLSRLLAEDKE 223
            MATE+EEL+ FLS PSPQ++K AVDIVR LTGS +GLQ+L  YS  + P+LSRLL   KE
Sbjct: 1    MATEMEELVSFLSSPSPQIRKAAVDIVRGLTGSVEGLQSLANYSNALLPALSRLLTLPKE 60

Query: 224  ISEPAAQALVNLSENSELSRKMIEVGITTTAMETLYKQQDANISRLIVMLLLNLTQLDEG 403
            +SE AA+ALVNLS+NS L+  M+ +G+  TAM+ LYK  D  I+RL+VMLL+NLTQL+ G
Sbjct: 61   VSEAAAEALVNLSQNSSLAEVMVRMGLVKTAMDVLYKP-DCGIARLLVMLLVNLTQLEAG 119

Query: 404  VMSLLQTEDEKTLGVHVMKLVRSFC-TSNEKGEDPFEHVGSILVNISRVEEGRKYILDPK 580
              SLLQTEDEK LG++V+KLVRSFC T++E  +D FEHVGSILVNIS+  +GR+ +LDPK
Sbjct: 120  AASLLQTEDEKVLGLYVIKLVRSFCRTTHENNDDAFEHVGSILVNISKQRKGRELLLDPK 179

Query: 581  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 760
            RGLLKQIIRQFDS S LRKKGV GTIRNCCFEA+ QLQNLLLVSE+LWPALLLPVAGNK+
Sbjct: 180  RGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKI 239

Query: 761  YSEQDTSKMPPELGTALSIERESVDDPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 940
            YSEQD SKMP ELGTALSIERE V+DP+IR+QALEA+YLIILQ+AGRRA WSVNGPR++Q
Sbjct: 240  YSEQDRSKMPLELGTALSIERELVNDPEIRIQALEAIYLIILQEAGRRAFWSVNGPRIVQ 299

Query: 941  LGYEDEANGEVMEAYERIGSLLVHGN 1018
            +GYEDE + +VMEAYE++GSLLVH +
Sbjct: 300  IGYEDEEDPKVMEAYEQLGSLLVHSS 325


>ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G0276861 [Vitis vinifera]
            gi|296086382|emb|CBI31971.3| unnamed protein product
            [Vitis vinifera]
          Length = 336

 Score =  456 bits (1173), Expect = e-126
 Identities = 231/326 (70%), Positives = 282/326 (86%), Gaps = 1/326 (0%)
 Frame = +2

Query: 44   MATELEELLQFLSFPSPQVKKGAVDIVRDLTGSEDGLQALTYYSQIVFPSLSRLLAEDKE 223
            M TELEEL+ FLS PSPQVKK AVDIV+ LTGSEDGLQ+L  +S ++ PSLSR+L+E KE
Sbjct: 1    MPTELEELVGFLSAPSPQVKKAAVDIVQGLTGSEDGLQSLCSHSDVLIPSLSRVLSEKKE 60

Query: 224  ISEPAAQALVNLSENSELSRKMIEVGITTTAMETLYKQQDANISRLIVMLLLNLTQLDEG 403
            +SEPAA+AL+NLS+  E + KM+ +G+  TAM+ LYKQ  + I+RL+VMLL+NLTQ D+G
Sbjct: 61   VSEPAAEALINLSQKPEQAAKMVAMGMIKTAMDILYKQ-GSGITRLLVMLLVNLTQSDDG 119

Query: 404  VMSLLQTEDEKTLGVHVMKLVRSFCTSN-EKGEDPFEHVGSILVNISRVEEGRKYILDPK 580
            + SLLQT DEK  G+++MKLVRSFCTS+ E  +DPFEHVGSILVNIS+ + GRK +LDPK
Sbjct: 120  IASLLQTGDEKIQGLYLMKLVRSFCTSSTETTDDPFEHVGSILVNISKKDSGRKMLLDPK 179

Query: 581  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 760
            RG+LKQI+RQFDST+ LRKKGV G IRNCCFEA+ QL+NLLL+SE+LWP LLLPVAG+KV
Sbjct: 180  RGMLKQIVRQFDSTNPLRKKGVSGMIRNCCFEAETQLENLLLISEFLWPTLLLPVAGSKV 239

Query: 761  YSEQDTSKMPPELGTALSIERESVDDPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 940
            YSE DTSKMP ELG+ALSIERE V DP+IRVQALE+LYLI LQ+AGRRALWSVNGPR+LQ
Sbjct: 240  YSEHDTSKMPLELGSALSIEREPVGDPEIRVQALESLYLISLQEAGRRALWSVNGPRILQ 299

Query: 941  LGYEDEANGEVMEAYERIGSLLVHGN 1018
            +GYEDE + +VMEA+E++GSLLVHG+
Sbjct: 300  VGYEDEEDPKVMEAFEQVGSLLVHGS 325


>ref|XP_004139650.1| PREDICTED: FAM203 family protein DDB_G0276861-like [Cucumis sativus]
          Length = 332

 Score =  453 bits (1165), Expect = e-125
 Identities = 227/324 (70%), Positives = 277/324 (85%), Gaps = 1/324 (0%)
 Frame = +2

Query: 44   MATELEELLQFLSFPSPQVKKGAVDIVRDLTGSEDGLQALTYYSQIVFPSLSRLLAEDKE 223
            MATELEEL+QFLS PSPQ++K A+DIV+ LTGSEDG+Q+L  Y  ++ PSL+RLL E K+
Sbjct: 1    MATELEELIQFLSSPSPQLRKAAIDIVQGLTGSEDGMQSLAKYPDVLLPSLARLLKEQKD 60

Query: 224  ISEPAAQALVNLSENSELSRKMIEVGITTTAMETLYKQQDANISRLIVMLLLNLTQLDEG 403
            ++E AA+ALVNLS+NS+L+ KMI +G+   AM  LY   D++IS+L+VMLL+NLTQLD G
Sbjct: 61   VAERAAEALVNLSQNSDLAGKMINLGLIGEAMNLLYNV-DSSISQLLVMLLVNLTQLDAG 119

Query: 404  VMSLLQTEDEKTLGVHVMKLVRSFCTS-NEKGEDPFEHVGSILVNISRVEEGRKYILDPK 580
            + SLLQT D+K  G++VMK+VRSFC S +E  +DPFEHV SILVNIS+ E GRK +LDP 
Sbjct: 120  IASLLQTGDDKMQGLYVMKIVRSFCRSASESRDDPFEHVASILVNISKKEAGRKLLLDPN 179

Query: 581  RGLLKQIIRQFDSTSLLRKKGVCGTIRNCCFEADKQLQNLLLVSEYLWPALLLPVAGNKV 760
            RGLLKQIIRQ+DS S LRK GV GT+RNCCFEA+ QLQNLLL++E+LWPALLLPVAGNKV
Sbjct: 180  RGLLKQIIRQYDSNSQLRKNGVFGTLRNCCFEAEDQLQNLLLIAEFLWPALLLPVAGNKV 239

Query: 761  YSEQDTSKMPPELGTALSIERESVDDPDIRVQALEALYLIILQDAGRRALWSVNGPRVLQ 940
            Y E+DTSKMP ELGTALSIERE +DDP+IRV ALEA+Y+IILQDAGRRA WS+NGPR+LQ
Sbjct: 240  YKEEDTSKMPLELGTALSIEREQIDDPEIRVHALEAIYMIILQDAGRRAFWSINGPRILQ 299

Query: 941  LGYEDEANGEVMEAYERIGSLLVH 1012
            +GYEDE N +VMEAYER+GSLLV+
Sbjct: 300  VGYEDEENPKVMEAYERVGSLLVN 323


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