BLASTX nr result

ID: Coptis23_contig00009888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009888
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283180.1| PREDICTED: uncharacterized protein LOC100245...    55   5e-06
ref|XP_003591161.1| Auxin-repressed 12.5 kDa protein [Medicago t...    55   6e-06
ref|XP_003591160.1| Auxin-repressed 12.5 kDa protein [Medicago t...    55   6e-06
ref|XP_003591159.1| Auxin-repressed 12.5 kDa protein [Medicago t...    55   6e-06
ref|XP_002319507.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002283180.1| PREDICTED: uncharacterized protein LOC100245909 isoform 1 [Vitis
           vinifera] gi|296089731|emb|CBI39550.3| unnamed protein
           product [Vitis vinifera]
          Length = 126

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 207 MSLLDHLWDDTVAGPQPEHGLGKLRKF 287
           M LLD LWDDTVAGPQP+HGLGKLRK+
Sbjct: 1   MGLLDQLWDDTVAGPQPDHGLGKLRKY 27


>ref|XP_003591161.1| Auxin-repressed 12.5 kDa protein [Medicago truncatula]
           gi|355480209|gb|AES61412.1| Auxin-repressed 12.5 kDa
           protein [Medicago truncatula]
          Length = 119

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 207 MSLLDHLWDDTVAGPQPEHGLGKLRK 284
           MS+LDHLWDDTVAGP+PE+GLGKLRK
Sbjct: 1   MSILDHLWDDTVAGPRPENGLGKLRK 26


>ref|XP_003591160.1| Auxin-repressed 12.5 kDa protein [Medicago truncatula]
           gi|217071010|gb|ACJ83865.1| unknown [Medicago
           truncatula] gi|355480208|gb|AES61411.1| Auxin-repressed
           12.5 kDa protein [Medicago truncatula]
           gi|388521433|gb|AFK48778.1| unknown [Medicago
           truncatula]
          Length = 132

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 207 MSLLDHLWDDTVAGPQPEHGLGKLRK 284
           MS+LDHLWDDTVAGP+PE+GLGKLRK
Sbjct: 1   MSILDHLWDDTVAGPRPENGLGKLRK 26


>ref|XP_003591159.1| Auxin-repressed 12.5 kDa protein [Medicago truncatula]
           gi|355480207|gb|AES61410.1| Auxin-repressed 12.5 kDa
           protein [Medicago truncatula]
           gi|388494480|gb|AFK35306.1| unknown [Medicago
           truncatula]
          Length = 128

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 207 MSLLDHLWDDTVAGPQPEHGLGKLRK 284
           MS+LDHLWDDTVAGP+PE+GLGKLRK
Sbjct: 1   MSILDHLWDDTVAGPRPENGLGKLRK 26


>ref|XP_002319507.1| predicted protein [Populus trichocarpa] gi|222857883|gb|EEE95430.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +3

Query: 207 MSLLDHLWDDTVAGPQPEHGLGKLRK 284
           MSLLDHLWDDTVAGP PE+GLGKLRK
Sbjct: 1   MSLLDHLWDDTVAGPLPENGLGKLRK 26


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