BLASTX nr result
ID: Coptis23_contig00009884
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00009884 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19342.3| unnamed protein product [Vitis vinifera] 72 5e-11 ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi... 72 5e-11 ref|XP_002301133.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl... 69 3e-10 ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl... 69 3e-10 >emb|CBI19342.3| unnamed protein product [Vitis vinifera] Length = 911 Score = 72.0 bits (175), Expect = 5e-11 Identities = 35/62 (56%), Positives = 49/62 (79%) Frame = +3 Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410 KI+P SG++F+ T RT++W+GIQQEITGRVQ K+ Y+VAAVV + N+ +A V++TL Sbjct: 264 KIVPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVAAVVR-IFGNNVTSADVRVTL 322 Query: 411 WV 416 WV Sbjct: 323 WV 324 >ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera] Length = 981 Score = 72.0 bits (175), Expect = 5e-11 Identities = 35/62 (56%), Positives = 49/62 (79%) Frame = +3 Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410 KI+P SG++F+ T RT++W+GIQQEITGRVQ K+ Y+VAAVV + N+ +A V++TL Sbjct: 298 KIVPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVAAVVR-IFGNNVTSADVRVTL 356 Query: 411 WV 416 WV Sbjct: 357 WV 358 >ref|XP_002301133.1| predicted protein [Populus trichocarpa] gi|222842859|gb|EEE80406.1| predicted protein [Populus trichocarpa] Length = 1049 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/62 (56%), Positives = 46/62 (74%) Frame = +3 Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410 K+ P SG +F+ TNRTE W+GI+Q+ITGRVQ KV Y+V AVV +N + +A VQITL Sbjct: 33 KVFPQSGMFFASATNRTENWNGIEQDITGRVQRKVAYQVTAVVRIYVDN-DTSAGVQITL 91 Query: 411 WV 416 W+ Sbjct: 92 WL 93 Score = 66.6 bits (161), Expect = 2e-09 Identities = 34/68 (50%), Positives = 49/68 (72%) Frame = +3 Query: 213 DNKAFVKILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTA 392 D+ A KI+P+SG+ F+ T RT++W+GIQQEIT RVQ K+ Y+V AVV + N+ +A Sbjct: 360 DSMADGKIVPLSGKLFASATERTQSWNGIQQEITERVQRKLAYEVTAVVR-IFGNNVTSA 418 Query: 393 LVQITLWV 416 ++ TLWV Sbjct: 419 DIRATLWV 426 >ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max] Length = 902 Score = 69.3 bits (168), Expect = 3e-10 Identities = 34/62 (54%), Positives = 47/62 (75%) Frame = +3 Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410 KI+P SG++F+ T RT++W+GIQQEITGRVQ K+ Y+V A+V + N+ TA V+ TL Sbjct: 218 KIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVR-IFGNNVSTADVRATL 276 Query: 411 WV 416 WV Sbjct: 277 WV 278 >ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max] Length = 930 Score = 69.3 bits (168), Expect = 3e-10 Identities = 34/62 (54%), Positives = 47/62 (75%) Frame = +3 Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410 KI+P SG++F+ T RT++W+GIQQEITGRVQ K+ Y+V A+V + N+ TA V+ TL Sbjct: 247 KIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVR-IFGNNVSTADVRATL 305 Query: 411 WV 416 WV Sbjct: 306 WV 307