BLASTX nr result

ID: Coptis23_contig00009884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009884
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19342.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi...    72   5e-11
ref|XP_002301133.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl...    69   3e-10
ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl...    69   3e-10

>emb|CBI19342.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/62 (56%), Positives = 49/62 (79%)
 Frame = +3

Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410
           KI+P SG++F+  T RT++W+GIQQEITGRVQ K+ Y+VAAVV  +  N+  +A V++TL
Sbjct: 264 KIVPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVAAVVR-IFGNNVTSADVRVTL 322

Query: 411 WV 416
           WV
Sbjct: 323 WV 324


>ref|XP_002283550.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera]
          Length = 981

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/62 (56%), Positives = 49/62 (79%)
 Frame = +3

Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410
           KI+P SG++F+  T RT++W+GIQQEITGRVQ K+ Y+VAAVV  +  N+  +A V++TL
Sbjct: 298 KIVPQSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVAAVVR-IFGNNVTSADVRVTL 356

Query: 411 WV 416
           WV
Sbjct: 357 WV 358


>ref|XP_002301133.1| predicted protein [Populus trichocarpa] gi|222842859|gb|EEE80406.1|
           predicted protein [Populus trichocarpa]
          Length = 1049

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = +3

Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410
           K+ P SG +F+  TNRTE W+GI+Q+ITGRVQ KV Y+V AVV    +N + +A VQITL
Sbjct: 33  KVFPQSGMFFASATNRTENWNGIEQDITGRVQRKVAYQVTAVVRIYVDN-DTSAGVQITL 91

Query: 411 WV 416
           W+
Sbjct: 92  WL 93



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/68 (50%), Positives = 49/68 (72%)
 Frame = +3

Query: 213 DNKAFVKILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTA 392
           D+ A  KI+P+SG+ F+  T RT++W+GIQQEIT RVQ K+ Y+V AVV  +  N+  +A
Sbjct: 360 DSMADGKIVPLSGKLFASATERTQSWNGIQQEITERVQRKLAYEVTAVVR-IFGNNVTSA 418

Query: 393 LVQITLWV 416
            ++ TLWV
Sbjct: 419 DIRATLWV 426


>ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max]
          Length = 902

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = +3

Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410
           KI+P SG++F+  T RT++W+GIQQEITGRVQ K+ Y+V A+V  +  N+  TA V+ TL
Sbjct: 218 KIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVR-IFGNNVSTADVRATL 276

Query: 411 WV 416
           WV
Sbjct: 277 WV 278


>ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max]
          Length = 930

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = +3

Query: 231 KILPVSGQYFSYTTNRTETWHGIQQEITGRVQEKVDYKVAAVVSPVCNNSEMTALVQITL 410
           KI+P SG++F+  T RT++W+GIQQEITGRVQ K+ Y+V A+V  +  N+  TA V+ TL
Sbjct: 247 KIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVR-IFGNNVSTADVRATL 305

Query: 411 WV 416
           WV
Sbjct: 306 WV 307


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