BLASTX nr result

ID: Coptis23_contig00009880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009880
         (1701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278430.1| PREDICTED: graves disease carrier protein is...   494   e-137
emb|CAN83681.1| hypothetical protein VITISV_003846 [Vitis vinifera]   494   e-137
ref|XP_002278410.1| PREDICTED: graves disease carrier protein is...   493   e-137
ref|XP_002308549.1| predicted protein [Populus trichocarpa] gi|2...   481   e-133
ref|XP_002516087.1| Grave disease carrier protein, putative [Ric...   464   e-128

>ref|XP_002278430.1| PREDICTED: graves disease carrier protein isoform 2 [Vitis vinifera]
          Length = 335

 Score =  494 bits (1273), Expect = e-137
 Identities = 256/339 (75%), Positives = 282/339 (83%), Gaps = 3/339 (0%)
 Frame = -2

Query: 1292 MGTSQGIK---NVAEYVEGSSPHRDVSFVDYLPGYAKELIXXXXXXXXXXXXXAPLERIK 1122
            MG+SQG     NVA +V+GS+   +VS++D +P Y KELI             APLER K
Sbjct: 1    MGSSQGSTLSTNVAGFVDGSTARTEVSYIDTMPVYVKELIAGGAAGAFAKTAVAPLERTK 60

Query: 1121 ILLQTRTVGYHSLGVYQSLKKVFKEEGYLGFYKGNGASVLRIVPYAALHFMTYEQYRCWI 942
            ILLQTRT G+HSLGVYQSLKK+ K EG LGFYKGNGASVLRIVPYAALHFMTYEQYR WI
Sbjct: 61   ILLQTRTEGFHSLGVYQSLKKILKHEGVLGFYKGNGASVLRIVPYAALHFMTYEQYRSWI 120

Query: 941  LNNYSALGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQVTGSKAASSSLTQPSYHG 762
            LNN  ALGTGPVVDLLAGS AGGTAVLCTYPLDLARTKLAYQV G    S    QP+Y+G
Sbjct: 121  LNNCPALGTGPVVDLLAGSVAGGTAVLCTYPLDLARTKLAYQVIGLHKYS----QPAYNG 176

Query: 761  IKDVFKTVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEELKRRVPEEHQKSVMLRLSC 582
            IKDVFK+VYKEGGVRALYRGVGPTLIGILPYAGLKFYIYE+LKR VPEEHQKS+ +RLSC
Sbjct: 177  IKDVFKSVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEKLKRHVPEEHQKSIAMRLSC 236

Query: 581  GALAGLFGQTLTYPLDVVRRQMQVQSLQSSIEQGGPGYRGTMEGLTTIVRNQGWRQLFAG 402
            GALAGL GQT TYPLDVVRRQMQV++LQ SI QG   YR T+EGL TI RNQGWRQLFAG
Sbjct: 237  GALAGLLGQTFTYPLDVVRRQMQVENLQPSI-QGNARYRNTLEGLATITRNQGWRQLFAG 295

Query: 401  LSINYLKVVPSVAIGFTAYDVMKSWLRVPPRQMSSKSVS 285
            LSINY+K+VPSVAIGFTAYD++KSWLRVPPRQ  ++S+S
Sbjct: 296  LSINYIKIVPSVAIGFTAYDMIKSWLRVPPRQ-KAQSIS 333


>emb|CAN83681.1| hypothetical protein VITISV_003846 [Vitis vinifera]
          Length = 344

 Score =  494 bits (1272), Expect = e-137
 Identities = 256/344 (74%), Positives = 283/344 (82%), Gaps = 8/344 (2%)
 Frame = -2

Query: 1292 MGTSQGIK---NVAEYVEGSSPHRDVSFVDYLPGYAKELIXXXXXXXXXXXXXAPLERIK 1122
            MG+SQG     NVA +V+GS+   +VS++D +P Y KELI             APLER K
Sbjct: 1    MGSSQGSTLSTNVAGFVDGSTARTEVSYIDTMPVYVKELIAGGAAGAFAKTAVAPLERTK 60

Query: 1121 ILLQTRTVGYHSLGVYQSLKKVFKEEGYLGFYKGNGASVLRIVPYAALHFMTYEQYRCWI 942
            ILLQTRT G+HSLGVYQSLKK+ K EG LGFYKGNGASVLRIVPYAALHFMTYEQYR WI
Sbjct: 61   ILLQTRTEGFHSLGVYQSLKKILKHEGVLGFYKGNGASVLRIVPYAALHFMTYEQYRSWI 120

Query: 941  LNNYSALGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQVTGSKAA-----SSSLTQ 777
            LNN  ALGTGPVVDLLAGS AGGTAVLCTYPLDLARTKLAYQV   + +      S   Q
Sbjct: 121  LNNCPALGTGPVVDLLAGSVAGGTAVLCTYPLDLARTKLAYQVVDLRGSFRSDMRSLQAQ 180

Query: 776  PSYHGIKDVFKTVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEELKRRVPEEHQKSVM 597
            P+Y+GIKDVFK+VYKEGGVRALYRGVGPTLIGILPYAGLKFYIYE+LKR VPEEHQKS+ 
Sbjct: 181  PAYNGIKDVFKSVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEKLKRHVPEEHQKSIA 240

Query: 596  LRLSCGALAGLFGQTLTYPLDVVRRQMQVQSLQSSIEQGGPGYRGTMEGLTTIVRNQGWR 417
            +RLSCGALAGL GQT TYPLDVVRRQMQV++LQ SI QG   YR T+EGL TI RNQGWR
Sbjct: 241  MRLSCGALAGLLGQTFTYPLDVVRRQMQVENLQPSI-QGNARYRNTLEGLATITRNQGWR 299

Query: 416  QLFAGLSINYLKVVPSVAIGFTAYDVMKSWLRVPPRQMSSKSVS 285
            QLFAGLSINY+K+VPSVAIGFTAYD+MKSWLRVPPRQ  ++S+S
Sbjct: 300  QLFAGLSINYIKIVPSVAIGFTAYDMMKSWLRVPPRQ-KAQSIS 342


>ref|XP_002278410.1| PREDICTED: graves disease carrier protein isoform 1 [Vitis vinifera]
            gi|296081639|emb|CBI20644.3| unnamed protein product
            [Vitis vinifera]
          Length = 344

 Score =  493 bits (1268), Expect = e-137
 Identities = 255/344 (74%), Positives = 283/344 (82%), Gaps = 8/344 (2%)
 Frame = -2

Query: 1292 MGTSQGIK---NVAEYVEGSSPHRDVSFVDYLPGYAKELIXXXXXXXXXXXXXAPLERIK 1122
            MG+SQG     NVA +V+GS+   +VS++D +P Y KELI             APLER K
Sbjct: 1    MGSSQGSTLSTNVAGFVDGSTARTEVSYIDTMPVYVKELIAGGAAGAFAKTAVAPLERTK 60

Query: 1121 ILLQTRTVGYHSLGVYQSLKKVFKEEGYLGFYKGNGASVLRIVPYAALHFMTYEQYRCWI 942
            ILLQTRT G+HSLGVYQSLKK+ K EG LGFYKGNGASVLRIVPYAALHFMTYEQYR WI
Sbjct: 61   ILLQTRTEGFHSLGVYQSLKKILKHEGVLGFYKGNGASVLRIVPYAALHFMTYEQYRSWI 120

Query: 941  LNNYSALGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQVTGSKAA-----SSSLTQ 777
            LNN  ALGTGPVVDLLAGS AGGTAVLCTYPLDLARTKLAYQV   + +      S   Q
Sbjct: 121  LNNCPALGTGPVVDLLAGSVAGGTAVLCTYPLDLARTKLAYQVVDLRGSFRSDMRSLQAQ 180

Query: 776  PSYHGIKDVFKTVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEELKRRVPEEHQKSVM 597
            P+Y+GIKDVFK+VYKEGGVRALYRGVGPTLIGILPYAGLKFYIYE+LKR VPEEHQKS+ 
Sbjct: 181  PAYNGIKDVFKSVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEKLKRHVPEEHQKSIA 240

Query: 596  LRLSCGALAGLFGQTLTYPLDVVRRQMQVQSLQSSIEQGGPGYRGTMEGLTTIVRNQGWR 417
            +RLSCGALAGL GQT TYPLDVVRRQMQV++LQ SI QG   YR T+EGL TI RNQGWR
Sbjct: 241  MRLSCGALAGLLGQTFTYPLDVVRRQMQVENLQPSI-QGNARYRNTLEGLATITRNQGWR 299

Query: 416  QLFAGLSINYLKVVPSVAIGFTAYDVMKSWLRVPPRQMSSKSVS 285
            QLFAGLSINY+K+VPSVAIGFTAYD++KSWLRVPPRQ  ++S+S
Sbjct: 300  QLFAGLSINYIKIVPSVAIGFTAYDMIKSWLRVPPRQ-KAQSIS 342


>ref|XP_002308549.1| predicted protein [Populus trichocarpa] gi|222854525|gb|EEE92072.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  481 bits (1238), Expect = e-133
 Identities = 248/341 (72%), Positives = 279/341 (81%), Gaps = 5/341 (1%)
 Frame = -2

Query: 1292 MGTSQGI---KNVAEYVEGSSPHRDVSFVDYLPGYAKELIXXXXXXXXXXXXXAPLERIK 1122
            M +SQG     NVAE V+GSS HRDVS +D +P Y KELI             APLER K
Sbjct: 1    MSSSQGSTLSSNVAELVDGSSAHRDVSLLDDVPVYVKELIAGGTAGAFAKTVIAPLERTK 60

Query: 1121 ILLQTRTVGYHSLGVYQSLKKVFKEEGYLGFYKGNGASVLRIVPYAALHFMTYEQYRCWI 942
            ILLQTRT G+ SLGV+QSLKK+ K EG LGFYKGNGASV+RIVPYAALHFMTYEQYR WI
Sbjct: 61   ILLQTRTEGFQSLGVFQSLKKLLKHEGILGFYKGNGASVIRIVPYAALHFMTYEQYRVWI 120

Query: 941  LNNYSALGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQVTGS--KAASSSLTQPSY 768
            LNN  ALGTGPV+DLLAGS AGGTAVLCTYPLDLARTKLAYQVT    +   S   QP+Y
Sbjct: 121  LNNCPALGTGPVIDLLAGSVAGGTAVLCTYPLDLARTKLAYQVTRDFRRGMKSICAQPAY 180

Query: 767  HGIKDVFKTVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEELKRRVPEEHQKSVMLRL 588
            +GIKDV  +VYKEGG+RALYRG+GPTLIGILPYAGLKFY+YEELKR VPEEHQ S+++RL
Sbjct: 181  NGIKDVLTSVYKEGGMRALYRGIGPTLIGILPYAGLKFYVYEELKRHVPEEHQ-SIVMRL 239

Query: 587  SCGALAGLFGQTLTYPLDVVRRQMQVQSLQSSIEQGGPGYRGTMEGLTTIVRNQGWRQLF 408
            SCGA+AGLFGQT+TYPLDVVRRQMQV++LQ  + QG   YR T EGL+TIVRNQGW+QLF
Sbjct: 240  SCGAIAGLFGQTITYPLDVVRRQMQVENLQ-PLSQGNARYRNTFEGLSTIVRNQGWKQLF 298

Query: 407  AGLSINYLKVVPSVAIGFTAYDVMKSWLRVPPRQMSSKSVS 285
            AGLSINY+K+VPSVAIGF AYD MK WLR+PPRQ  S+S+S
Sbjct: 299  AGLSINYIKIVPSVAIGFAAYDTMKVWLRIPPRQ-KSQSIS 338


>ref|XP_002516087.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223544573|gb|EEF46089.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 344

 Score =  464 bits (1194), Expect = e-128
 Identities = 241/339 (71%), Positives = 270/339 (79%), Gaps = 8/339 (2%)
 Frame = -2

Query: 1292 MGTSQGIK---NVAEYVEGSSPHRDVSFVDYLPGYAKELIXXXXXXXXXXXXXAPLERIK 1122
            MG+ QG     N+A  V+GS   R+VS++D +P Y KELI             APLER K
Sbjct: 1    MGSPQGSTFSANMAGLVDGSPSRREVSYIDTMPVYVKELIAGGAAGGIAKTAVAPLERTK 60

Query: 1121 ILLQTRTVGYHSLGVYQSLKKVFKEEGYLGFYKGNGASVLRIVPYAALHFMTYEQYRCWI 942
            ILLQTRT G+ SLGV QSLKK+FK EG LGFYKGNGASV+RIVPYAALHFMTYEQYR WI
Sbjct: 61   ILLQTRTEGFQSLGVSQSLKKLFKHEGILGFYKGNGASVIRIVPYAALHFMTYEQYRSWI 120

Query: 941  LNNYSALGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQV---TGS--KAASSSLTQ 777
            LNN  ALG+GPV+DLLAGS AGGTAVLCTYPLDLARTKLAYQV   TG+      S   +
Sbjct: 121  LNNCPALGSGPVIDLLAGSVAGGTAVLCTYPLDLARTKLAYQVLDTTGNFRSGMKSIGAR 180

Query: 776  PSYHGIKDVFKTVYKEGGVRALYRGVGPTLIGILPYAGLKFYIYEELKRRVPEEHQKSVM 597
            P+Y G+KDV   VY+EGGVRALYRGVGPTL GILPYAGLKFY+YEELKR VPEE QKS++
Sbjct: 181  PAYGGLKDVITNVYREGGVRALYRGVGPTLTGILPYAGLKFYVYEELKRHVPEEQQKSIV 240

Query: 596  LRLSCGALAGLFGQTLTYPLDVVRRQMQVQSLQSSIEQGGPGYRGTMEGLTTIVRNQGWR 417
            +RLSCGALAGL GQT TYPLDVVRRQMQV++LQ S+ QG   YR T +GL+TIVR QGWR
Sbjct: 241  MRLSCGALAGLLGQTFTYPLDVVRRQMQVENLQPSV-QGHGRYRNTWDGLSTIVRKQGWR 299

Query: 416  QLFAGLSINYLKVVPSVAIGFTAYDVMKSWLRVPPRQMS 300
            QLFAGLSINY+K+VPSVAIGFTAYD MK WLR+PPRQ S
Sbjct: 300  QLFAGLSINYIKIVPSVAIGFTAYDTMKMWLRIPPRQKS 338


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