BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009879
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] ...    79   5e-13
ref|NP_001046849.2| Os02g0480100 [Oryza sativa Japonica Group] g...    68   1e-09
gb|EEE56995.1| hypothetical protein OsJ_06738 [Oryza sativa Japo...    68   1e-09
gb|EEE50885.1| hypothetical protein OsJ_31363 [Oryza sativa Japo...    67   1e-09
gb|AAK13103.1|AC078839_19 Helicase-like protein [Oryza sativa Ja...    67   1e-09

>ref|XP_003614469.1| Helicase-like protein [Medicago truncatula]
           gi|355515804|gb|AES97427.1| Helicase-like protein
           [Medicago truncatula]
          Length = 377

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 40/98 (40%), Positives = 55/98 (56%)
 Frame = -1

Query: 305 RSFHNCARDFTDSPPLQRMHLGNMRTCIHCQAKLYPHESWEFCCLNGRVSXXXXXXXXXL 126
           ++ HN AR+F ++  +    L   RTC  C  KL+  E+   CC NG V          L
Sbjct: 102 QAIHNNARNFKNTVMMINALLPTPRTCRRCNTKLFYKETQYMCCKNGNVIVTQVAAPEEL 161

Query: 125 MYLYTAHSDVGKHFRDNIRRYNHVFAFTSMGVHIDENL 12
             L++  +  G+HFR NIR YNHV +FTS+GVHIDE +
Sbjct: 162 QQLFSDTTIEGRHFRQNIRGYNHVMSFTSLGVHIDETM 199


>ref|NP_001046849.2| Os02g0480100 [Oryza sativa Japonica Group]
           gi|255670903|dbj|BAF08763.2| Os02g0480100 [Oryza sativa
           Japonica Group]
          Length = 1466

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
 Frame = -1

Query: 464 FQNLNSSNFRDWNLYEEGHENEDPDQYLSTL---EDDPPVVQSDISNRSKRLSNRQRSFH 294
           +    S  F D ++     ++ D + Y+      ++D  +VQSD  +     S+    F 
Sbjct: 250 YHRTRSCTFDDDDMDSFMDDDSDDEYYMFVGLGDDEDDDMVQSDDDDTQSPTSSVPDPFD 309

Query: 293 NCARDFTDSPPLQRMHLGNMRTCIHCQAKLYPHESWEFCCLNGRVSXXXXXXXXXLMYLY 114
               +   S  + +        C HC AK + +E   FCC +G+++         LM L+
Sbjct: 310 YVYSNIPQSTNVLKPE----PDCKHCGAKRFQYEPPSFCCRDGKINLVQNETPPELMRLW 365

Query: 113 TAHSDVGKHFRDNIRRYNHVFAFTSMGVHIDENLAN 6
           T+     KHFRDNIR +N  F+FT++GV +D+  AN
Sbjct: 366 TSSDPDAKHFRDNIRYFNGHFSFTTLGVSLDKAFAN 401


>gb|EEE56995.1| hypothetical protein OsJ_06738 [Oryza sativa Japonica Group]
          Length = 512

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
 Frame = -1

Query: 464 FQNLNSSNFRDWNLYEEGHENEDPDQYLSTL---EDDPPVVQSDISNRSKRLSNRQRSFH 294
           +    S  F D ++     ++ D + Y+      ++D  +VQSD  +     S+    F 
Sbjct: 250 YHRTRSCTFDDDDMDSFMDDDSDDEYYMFVGLGDDEDDDMVQSDDDDTQSPTSSVPDPFD 309

Query: 293 NCARDFTDSPPLQRMHLGNMRTCIHCQAKLYPHESWEFCCLNGRVSXXXXXXXXXLMYLY 114
               +   S  + +        C HC AK + +E   FCC +G+++         LM L+
Sbjct: 310 YVYSNIPQSTNVLKPE----PDCKHCGAKRFQYEPPSFCCRDGKINLVQNETPPELMRLW 365

Query: 113 TAHSDVGKHFRDNIRRYNHVFAFTSMGVHIDENLAN 6
           T+     KHFRDNIR +N  F+FT++GV +D+  AN
Sbjct: 366 TSSDPDAKHFRDNIRYFNGHFSFTTLGVSLDKAFAN 401


>gb|EEE50885.1| hypothetical protein OsJ_31363 [Oryza sativa Japonica Group]
          Length = 1291

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/122 (32%), Positives = 60/122 (49%)
 Frame = -1

Query: 371 EDDPPVVQSDISNRSKRLSNRQRSFHNCARDFTDSPPLQRMHLGNMRTCIHCQAKLYPHE 192
           +DD  +VQSD  +     S+    F     +   S  + +        C HC AK + +E
Sbjct: 449 DDDDEMVQSDDDDTQSPTSSVPDPFDCVYSNIPQSTNVLKAE----PDCKHCGAKRFQYE 504

Query: 191 SWEFCCLNGRVSXXXXXXXXXLMYLYTAHSDVGKHFRDNIRRYNHVFAFTSMGVHIDENL 12
              FCC +G++          LM L+T+     KHFRDNIR +N  F+FT++GV +D+  
Sbjct: 505 PPGFCCRDGKIKLVENETPPELMRLWTSSDPDAKHFRDNIRYFNGHFSFTTLGVSLDKAF 564

Query: 11  AN 6
           AN
Sbjct: 565 AN 566


>gb|AAK13103.1|AC078839_19 Helicase-like protein [Oryza sativa Japonica Group]
          Length = 1336

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/122 (32%), Positives = 60/122 (49%)
 Frame = -1

Query: 371 EDDPPVVQSDISNRSKRLSNRQRSFHNCARDFTDSPPLQRMHLGNMRTCIHCQAKLYPHE 192
           +DD  +VQSD  +     S+    F     +   S  + +        C HC AK + +E
Sbjct: 178 DDDDEMVQSDDDDTQSPTSSVPDPFDCVYSNIPQSTNVLKAE----PDCKHCGAKRFQYE 233

Query: 191 SWEFCCLNGRVSXXXXXXXXXLMYLYTAHSDVGKHFRDNIRRYNHVFAFTSMGVHIDENL 12
              FCC +G++          LM L+T+     KHFRDNIR +N  F+FT++GV +D+  
Sbjct: 234 PPGFCCRDGKIKLVENETPPELMRLWTSSDPDAKHFRDNIRYFNGHFSFTTLGVSLDKAF 293

Query: 11  AN 6
           AN
Sbjct: 294 AN 295