BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009867
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284747.1| PREDICTED: 26S protease regulatory subunit 8...   114   2e-45
ref|XP_004149888.1| PREDICTED: 26S protease regulatory subunit 8...   114   6e-45
gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicot...   114   8e-45
ref|XP_002529369.1| 26S protease regulatory subunit, putative [R...   114   1e-44
gb|ABK95350.1| unknown [Populus trichocarpa]                          113   2e-44

>ref|XP_002284747.1| PREDICTED: 26S protease regulatory subunit 8 homolog A [Vitis
           vinifera] gi|296081963|emb|CBI20968.3| unnamed protein
           product [Vitis vinifera]
          Length = 420

 Score =  114 bits (286), Expect(2) = 2e-45
 Identities = 59/72 (81%), Positives = 60/72 (83%)
 Frame = +3

Query: 288 YVGEVVKVMGKSKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKV 467
           YVGEVVKVMGKSKVLVKVHPEGKYVV            PSTRVALRNDSYVLHL+LPSKV
Sbjct: 85  YVGEVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLILPSKV 144

Query: 468 DPLVNLMKVEKV 503
           DPLVNLMKVEKV
Sbjct: 145 DPLVNLMKVEKV 156



 Score = 92.8 bits (229), Expect(2) = 2e-45
 Identities = 45/59 (76%), Positives = 49/59 (83%)
 Frame = +2

Query: 53  ATKQGEGLRQYYLQHIHDQQLLLRQKSHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGS 229
           ++KQG+GLRQYYLQHIHD QL +RQKSHNLNRLEAQRNDLNSRVRMLR        PGS
Sbjct: 26  SSKQGDGLRQYYLQHIHDLQLQVRQKSHNLNRLEAQRNDLNSRVRMLREELQLLQEPGS 84


>ref|XP_004149888.1| PREDICTED: 26S protease regulatory subunit 8 homolog A-like
           [Cucumis sativus] gi|449521908|ref|XP_004167971.1|
           PREDICTED: 26S protease regulatory subunit 8 homolog
           A-like [Cucumis sativus]
          Length = 418

 Score =  114 bits (284), Expect(2) = 6e-45
 Identities = 59/72 (81%), Positives = 60/72 (83%)
 Frame = +3

Query: 288 YVGEVVKVMGKSKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKV 467
           YVGEVVKVMGK+KVLVKVHPEGKYVV            PSTRVALRNDSYVLHLVLPSKV
Sbjct: 83  YVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKV 142

Query: 468 DPLVNLMKVEKV 503
           DPLVNLMKVEKV
Sbjct: 143 DPLVNLMKVEKV 154



 Score = 92.0 bits (227), Expect(2) = 6e-45
 Identities = 44/59 (74%), Positives = 49/59 (83%)
 Frame = +2

Query: 53  ATKQGEGLRQYYLQHIHDQQLLLRQKSHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGS 229
           ATKQGEGLRQYYLQHIH+ QL +RQK+HNLNRLEAQRN+LNS+VRMLR        PGS
Sbjct: 24  ATKQGEGLRQYYLQHIHEHQLQVRQKTHNLNRLEAQRNELNSKVRMLREELQLLQEPGS 82


>gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicotiana tabacum]
          Length = 417

 Score =  114 bits (286), Expect(2) = 8e-45
 Identities = 59/72 (81%), Positives = 60/72 (83%)
 Frame = +3

Query: 288 YVGEVVKVMGKSKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKV 467
           YVGEVVKVMGKSKVLVKVHPEGKYVV            PSTRVALRNDSYVLHL+LPSKV
Sbjct: 82  YVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKV 141

Query: 468 DPLVNLMKVEKV 503
           DPLVNLMKVEKV
Sbjct: 142 DPLVNLMKVEKV 153



 Score = 90.9 bits (224), Expect(2) = 8e-45
 Identities = 43/59 (72%), Positives = 49/59 (83%)
 Frame = +2

Query: 53  ATKQGEGLRQYYLQHIHDQQLLLRQKSHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGS 229
           ATKQGEGLRQYY+QHIHD QL +RQK+HNLNRLEAQRN+LNS+VRML+        PGS
Sbjct: 23  ATKQGEGLRQYYMQHIHDLQLQVRQKTHNLNRLEAQRNELNSKVRMLKEELQLLQEPGS 81


>ref|XP_002529369.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223531189|gb|EEF33036.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 382

 Score =  114 bits (284), Expect(2) = 1e-44
 Identities = 59/72 (81%), Positives = 60/72 (83%)
 Frame = +3

Query: 288 YVGEVVKVMGKSKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKV 467
           YVGEVVKVMGK+KVLVKVHPEGKYVV            PSTRVALRNDSYVLHLVLPSKV
Sbjct: 84  YVGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKV 143

Query: 468 DPLVNLMKVEKV 503
           DPLVNLMKVEKV
Sbjct: 144 DPLVNLMKVEKV 155



 Score = 91.3 bits (225), Expect(2) = 1e-44
 Identities = 44/59 (74%), Positives = 48/59 (81%)
 Frame = +2

Query: 53  ATKQGEGLRQYYLQHIHDQQLLLRQKSHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGS 229
           A KQGEGLRQYYLQHIH+ QL +RQK+HNLNRLEAQRN+LNSRVRMLR        PGS
Sbjct: 25  AVKQGEGLRQYYLQHIHEHQLQVRQKTHNLNRLEAQRNELNSRVRMLREELQLLQEPGS 83


>gb|ABK95350.1| unknown [Populus trichocarpa]
          Length = 426

 Score =  113 bits (283), Expect(2) = 2e-44
 Identities = 58/72 (80%), Positives = 60/72 (83%)
 Frame = +3

Query: 288 YVGEVVKVMGKSKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKV 467
           YVGEVVKVMGK+KVLVKVHPEGKYVV            PSTRVALRNDSYVLHL+LPSKV
Sbjct: 91  YVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKV 150

Query: 468 DPLVNLMKVEKV 503
           DPLVNLMKVEKV
Sbjct: 151 DPLVNLMKVEKV 162



 Score = 90.5 bits (223), Expect(2) = 2e-44
 Identities = 44/59 (74%), Positives = 48/59 (81%)
 Frame = +2

Query: 53  ATKQGEGLRQYYLQHIHDQQLLLRQKSHNLNRLEAQRNDLNSRVRMLRXXXXXXXXPGS 229
           A +QGEGL+QYYLQHIH+ QLL+RQKSHNLNRLEAQRN LNSRVRMLR        PGS
Sbjct: 32  AVRQGEGLKQYYLQHIHELQLLVRQKSHNLNRLEAQRNGLNSRVRMLREESQLLQEPGS 90