BLASTX nr result

ID: Coptis23_contig00009865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009865
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263710.1| PREDICTED: uncharacterized protein LOC100257...   327   3e-87
ref|XP_002263639.1| PREDICTED: uncharacterized protein LOC100257...   327   3e-87
ref|XP_002302154.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
emb|CBI29359.3| unnamed protein product [Vitis vinifera]              311   2e-82
ref|XP_002527097.1| conserved hypothetical protein [Ricinus comm...   306   6e-81

>ref|XP_002263710.1| PREDICTED: uncharacterized protein LOC100257934 isoform 2 [Vitis
           vinifera]
          Length = 246

 Score =  327 bits (838), Expect = 3e-87
 Identities = 159/229 (69%), Positives = 188/229 (82%)
 Frame = +1

Query: 28  VNVLKCLFSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYK 207
           VN L+ LFSVL CLML TL+YT+  DGLPFR++LLTPWMAATLVDFYI + ALAAWVS K
Sbjct: 6   VNGLRGLFSVLGCLMLATLLYTISTDGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCK 65

Query: 208 VPNWISAVVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNKNDSERKK 387
             N +SA++W IL VCFGS+TTC +I+LQ  K S +   QD +Y+VL+R  +KN + +K+
Sbjct: 66  ESNRVSAILWTILLVCFGSITTCAYIVLQFSKLSSESV-QDAIYHVLLRNQSKNGTVQKR 124

Query: 388 TFFSVVAARFLFTALGCLMLGTLISTILTDGSPFRKELLTPWLTATLVDFYINIVAISVW 567
           TF  +V AR  F+ LG LMLGTLI T+LTDGSPFRKELLTPW+TATL+DFYIN+VA+SVW
Sbjct: 125 TFSPIVTARISFSLLGLLMLGTLIYTLLTDGSPFRKELLTPWMTATLIDFYINVVALSVW 184

Query: 568 VVYKEAQWISALLWIVLLICFGSITTCAYIVVQLFQLSSQDPLYLTLLN 714
           V YKE+ WISA LWI+LLICFGSITTC YIV QLFQLSSQDPLYL LLN
Sbjct: 185 VAYKESSWISAFLWIILLICFGSITTCIYIVQQLFQLSSQDPLYLVLLN 233



 Score =  142 bits (358), Expect = 2e-31
 Identities = 67/106 (63%), Positives = 82/106 (77%)
 Frame = +1

Query: 49  FSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPNWISA 228
           FS+L  LMLGTLIYTL  DG PFRKELLTPWM ATL+DFYI + AL+ WV+YK  +WISA
Sbjct: 136 FSLLGLLMLGTLIYTLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISA 195

Query: 229 VVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNK 366
            +WIIL +CFGS+TTC +I+ QLF+ S    SQDP+Y VL+   N+
Sbjct: 196 FLWIILLICFGSITTCIYIVQQLFQLS----SQDPLYLVLLNNGNR 237


>ref|XP_002263639.1| PREDICTED: uncharacterized protein LOC100257934 isoform 1 [Vitis
           vinifera]
          Length = 266

 Score =  327 bits (838), Expect = 3e-87
 Identities = 159/229 (69%), Positives = 188/229 (82%)
 Frame = +1

Query: 28  VNVLKCLFSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYK 207
           VN L+ LFSVL CLML TL+YT+  DGLPFR++LLTPWMAATLVDFYI + ALAAWVS K
Sbjct: 6   VNGLRGLFSVLGCLMLATLLYTISTDGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCK 65

Query: 208 VPNWISAVVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNKNDSERKK 387
             N +SA++W IL VCFGS+TTC +I+LQ  K S +   QD +Y+VL+R  +KN + +K+
Sbjct: 66  ESNRVSAILWTILLVCFGSITTCAYIVLQFSKLSSESV-QDAIYHVLLRNQSKNGTVQKR 124

Query: 388 TFFSVVAARFLFTALGCLMLGTLISTILTDGSPFRKELLTPWLTATLVDFYINIVAISVW 567
           TF  +V AR  F+ LG LMLGTLI T+LTDGSPFRKELLTPW+TATL+DFYIN+VA+SVW
Sbjct: 125 TFSPIVTARISFSLLGLLMLGTLIYTLLTDGSPFRKELLTPWMTATLIDFYINVVALSVW 184

Query: 568 VVYKEAQWISALLWIVLLICFGSITTCAYIVVQLFQLSSQDPLYLTLLN 714
           V YKE+ WISA LWI+LLICFGSITTC YIV QLFQLSSQDPLYL LLN
Sbjct: 185 VAYKESSWISAFLWIILLICFGSITTCIYIVQQLFQLSSQDPLYLVLLN 233



 Score =  142 bits (358), Expect = 2e-31
 Identities = 67/106 (63%), Positives = 82/106 (77%)
 Frame = +1

Query: 49  FSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPNWISA 228
           FS+L  LMLGTLIYTL  DG PFRKELLTPWM ATL+DFYI + AL+ WV+YK  +WISA
Sbjct: 136 FSLLGLLMLGTLIYTLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISA 195

Query: 229 VVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNK 366
            +WIIL +CFGS+TTC +I+ QLF+ S    SQDP+Y VL+   N+
Sbjct: 196 FLWIILLICFGSITTCIYIVQQLFQLS----SQDPLYLVLLNNGNR 237


>ref|XP_002302154.1| predicted protein [Populus trichocarpa] gi|222843880|gb|EEE81427.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  323 bits (829), Expect = 4e-86
 Identities = 152/228 (66%), Positives = 186/228 (81%)
 Frame = +1

Query: 31  NVLKCLFSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKV 210
           N L+ LFSVL CLM+ TLIYT+ +DG PFR++LLTPWMAATLVDFYI I ALAAW+SYK 
Sbjct: 7   NGLRALFSVLGCLMVATLIYTIYVDGFPFRRDLLTPWMAATLVDFYINIIALAAWISYKE 66

Query: 211 PNWISAVVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNKNDSERKKT 390
            N+I+A VWI+L +C GS+ TC +I +QL K SP++  QDP+Y+VL+R +NK   ++ K 
Sbjct: 67  SNFITATVWIVLLICSGSIATCAYIFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQ 126

Query: 391 FFSVVAARFLFTALGCLMLGTLISTILTDGSPFRKELLTPWLTATLVDFYINIVAISVWV 570
             +VV AR  F+ LG LMLGTLI T++TDGSPFRKELLTPW+ ATL+DFYIN+VA+SVWV
Sbjct: 127 S-AVVTARIAFSILGLLMLGTLIYTLITDGSPFRKELLTPWMVATLIDFYINVVALSVWV 185

Query: 571 VYKEAQWISALLWIVLLICFGSITTCAYIVVQLFQLSSQDPLYLTLLN 714
            YKE+ WISA LWI+LLICFGSITTCAYIV QL QL+SQDP+YL L N
Sbjct: 186 AYKESSWISAFLWILLLICFGSITTCAYIVKQLLQLTSQDPVYLILFN 233



 Score =  138 bits (347), Expect = 3e-30
 Identities = 63/106 (59%), Positives = 81/106 (76%)
 Frame = +1

Query: 49  FSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPNWISA 228
           FS+L  LMLGTLIYTL  DG PFRKELLTPWM ATL+DFYI + AL+ WV+YK  +WISA
Sbjct: 136 FSILGLLMLGTLIYTLITDGSPFRKELLTPWMVATLIDFYINVVALSVWVAYKESSWISA 195

Query: 229 VVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNK 366
            +WI+L +CFGS+TTC +I+ QL + +    SQDP+Y +L  + N+
Sbjct: 196 FLWILLLICFGSITTCAYIVKQLLQLT----SQDPVYLILFNRGNR 237


>emb|CBI29359.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  311 bits (797), Expect = 2e-82
 Identities = 149/215 (69%), Positives = 177/215 (82%)
 Frame = +1

Query: 70  MLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPNWISAVVWIILF 249
           ML TL+YT+  DGLPFR++LLTPWMAATLVDFYI + ALAAWVS K  N +SA++W IL 
Sbjct: 1   MLATLLYTISTDGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCKESNRVSAILWTILL 60

Query: 250 VCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNKNDSERKKTFFSVVAARFLFTA 429
           VCFGS+TTC +I+LQ  K S +   QD +Y+VL+R  +KN + +K+TF  +V AR  F+ 
Sbjct: 61  VCFGSITTCAYIVLQFSKLSSESV-QDAIYHVLLRNQSKNGTVQKRTFSPIVTARISFSL 119

Query: 430 LGCLMLGTLISTILTDGSPFRKELLTPWLTATLVDFYINIVAISVWVVYKEAQWISALLW 609
           LG LMLGTLI T+LTDGSPFRKELLTPW+TATL+DFYIN+VA+SVWV YKE+ WISA LW
Sbjct: 120 LGLLMLGTLIYTLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISAFLW 179

Query: 610 IVLLICFGSITTCAYIVVQLFQLSSQDPLYLTLLN 714
           I+LLICFGSITTC YIV QLFQLSSQDPLYL LLN
Sbjct: 180 IILLICFGSITTCIYIVQQLFQLSSQDPLYLVLLN 214



 Score =  142 bits (358), Expect = 2e-31
 Identities = 67/106 (63%), Positives = 82/106 (77%)
 Frame = +1

Query: 49  FSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPNWISA 228
           FS+L  LMLGTLIYTL  DG PFRKELLTPWM ATL+DFYI + AL+ WV+YK  +WISA
Sbjct: 117 FSLLGLLMLGTLIYTLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISA 176

Query: 229 VVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNK 366
            +WIIL +CFGS+TTC +I+ QLF+ S    SQDP+Y VL+   N+
Sbjct: 177 FLWIILLICFGSITTCIYIVQQLFQLS----SQDPLYLVLLNNGNR 218


>ref|XP_002527097.1| conserved hypothetical protein [Ricinus communis]
           gi|223533520|gb|EEF35260.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  306 bits (784), Expect = 6e-81
 Identities = 142/226 (62%), Positives = 173/226 (76%), Gaps = 1/226 (0%)
 Frame = +1

Query: 37  LKCLFSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPN 216
           L+  F  L C+M+ TL+YT+ IDGLPFR++LLTPWM  TLVDFYI +   AAW  YK  N
Sbjct: 10  LRSAFLALCCVMIATLVYTISIDGLPFRRDLLTPWMTVTLVDFYINVVPFAAWTYYKESN 69

Query: 217 WISAVVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNKND-SERKKTF 393
             +AV+WIIL +CFGSVTTC +I +Q  K SPQ+  QDPMYYVL++ D K+   +++K  
Sbjct: 70  HFTAVIWIILLICFGSVTTCAYIFIQFLKLSPQESLQDPMYYVLLQHDTKDGVGQKQKNH 129

Query: 394 FSVVAARFLFTALGCLMLGTLISTILTDGSPFRKELLTPWLTATLVDFYINIVAISVWVV 573
            SVV AR  F+ LGCLM  TL+ TILTDGSPFRKEL TPW+ ATL+DFYINI A+SVW+ 
Sbjct: 130 SSVVPARIGFSILGCLMAATLVYTILTDGSPFRKELFTPWMVATLIDFYINIAALSVWIA 189

Query: 574 YKEAQWISALLWIVLLICFGSITTCAYIVVQLFQLSSQDPLYLTLL 711
           YKE+ W+   LWI+LLICFGSI+TCAYIV QL QL+SQDPLYL LL
Sbjct: 190 YKESGWLHGFLWIILLICFGSISTCAYIVNQLLQLTSQDPLYLVLL 235



 Score =  134 bits (337), Expect = 4e-29
 Identities = 59/108 (54%), Positives = 79/108 (73%)
 Frame = +1

Query: 49  FSVLLCLMLGTLIYTLCIDGLPFRKELLTPWMAATLVDFYITIFALAAWVSYKVPNWISA 228
           FS+L CLM  TL+YT+  DG PFRKEL TPWM ATL+DFYI I AL+ W++YK   W+  
Sbjct: 139 FSILGCLMAATLVYTILTDGSPFRKELFTPWMVATLIDFYINIAALSVWIAYKESGWLHG 198

Query: 229 VVWIILFVCFGSVTTCTFILLQLFKFSPQDPSQDPMYYVLVRQDNKND 372
            +WIIL +CFGS++TC +I+ QL + +    SQDP+Y VL+++DN  D
Sbjct: 199 FLWIILLICFGSISTCAYIVNQLLQLT----SQDPLYLVLLKRDNSLD 242



 Score =  130 bits (326), Expect = 8e-28
 Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
 Frame = +1

Query: 403 VAARFLFTALGCLMLGTLISTILTDGSPFRKELLTPWLTATLVDFYINIVAISVWVVYKE 582
           +  R  F AL C+M+ TL+ TI  DG PFR++LLTPW+T TLVDFYIN+V  + W  YKE
Sbjct: 8   IGLRSAFLALCCVMIATLVYTISIDGLPFRRDLLTPWMTVTLVDFYINVVPFAAWTYYKE 67

Query: 583 AQWISALLWIVLLICFGSITTCAYIVVQLFQLSS----QDPLYLTLL 711
           +   +A++WI+LLICFGS+TTCAYI +Q  +LS     QDP+Y  LL
Sbjct: 68  SNHFTAVIWIILLICFGSVTTCAYIFIQFLKLSPQESLQDPMYYVLL 114


Top