BLASTX nr result
ID: Coptis23_contig00009861
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00009861
(779 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274834.2| PREDICTED: DELLA protein GAI1-like [Vitis vi... 215 1e-53
ref|XP_002512896.1| DELLA protein GAI1, putative [Ricinus commun... 213 3e-53
ref|XP_002298647.1| GRAS family transcription factor [Populus tr... 211 1e-52
ref|XP_004171790.1| PREDICTED: DELLA protein GAI1-like [Cucumis ... 191 2e-46
ref|XP_004138798.1| PREDICTED: DELLA protein GAI1-like [Cucumis ... 191 2e-46
>ref|XP_002274834.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
gi|296082313|emb|CBI21318.3| unnamed protein product
[Vitis vinifera]
Length = 668
Score = 215 bits (547), Expect = 1e-53
Identities = 130/270 (48%), Positives = 155/270 (57%), Gaps = 11/270 (4%)
Frame = +1
Query: 1 QRDGLGA--YSTMKMTGLGCS-----QENFETPTTLSAMFDSSHLPNSSRFCGSASEVGA 159
QRDG+GA Y MK+ +G S + + P T+ L N+ RF G SE A
Sbjct: 171 QRDGVGASSYPMMKIPAVGISGASSLAQYLDMPITIHPTALDLPLQNTWRFSGPVSESSA 230
Query: 160 SGGLRISQDREVYQ---MNSFATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 330
+GG +++Q++++YQ M+S A+L
Sbjct: 231 TGGSQLTQEKDMYQMGSMSSTASLSQQLQEEHQQEQQLQQKQQQLQEIQ----------- 279
Query: 331 XXXXXXXXXXNLDHNFLGSLST-SEQEQDSGLQLVHLLLACAEAVAKEDYMTARRYLHQL 507
N +H + SEQE DSGLQLVH LLACAEAVAKEDYM ARRYLH L
Sbjct: 280 ----------NPNHGLMVPHPLGSEQEHDSGLQLVHFLLACAEAVAKEDYMLARRYLHHL 329
Query: 508 NRVVTPLGDSMQRVASCFXXXXXXXXXXXXXXSPNSSNPKPFTPFPSNSLEVLKIYQILY 687
NRVVTPLGDSMQRVASCF P++S KPF PFP NSLE+LKIYQILY
Sbjct: 330 NRVVTPLGDSMQRVASCFTEALSARLAATLTPKPSTSTTKPFNPFPPNSLEILKIYQILY 389
Query: 688 QACPYIKFAHFTSNQAIFEAFESEERVHII 777
QACPYIKFAHFT+NQAIFEAFE+EERVH+I
Sbjct: 390 QACPYIKFAHFTANQAIFEAFEAEERVHVI 419
>ref|XP_002512896.1| DELLA protein GAI1, putative [Ricinus communis]
gi|223547907|gb|EEF49399.1| DELLA protein GAI1, putative
[Ricinus communis]
Length = 686
Score = 213 bits (543), Expect = 3e-53
Identities = 127/265 (47%), Positives = 154/265 (58%), Gaps = 6/265 (2%)
Frame = +1
Query: 1 QRDGL-GAYSTMKM---TGLGCSQENFETPTTLSA-MFDSSHLPNSSRFCGSASEVGASG 165
QRDGL G Y ++ TG S E F+ T + D +P+SS F GS SE SG
Sbjct: 180 QRDGLVGGYQPTRLSSGTGNSASSELFDMQTAAGPPLLDCLSMPSSSVFGGSVSETSPSG 239
Query: 166 GLRISQDREVYQMNSFATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345
+++QDR++Y M S
Sbjct: 240 S-QLAQDRDIYHMESLRNAPPLSQQLQQEQQENQRQPPPSTTPPPPPPVATTPPERQQQ- 297
Query: 346 XXXXXNLDHNFLGSLSTS-EQEQDSGLQLVHLLLACAEAVAKEDYMTARRYLHQLNRVVT 522
NL+ + + L EQEQDSGLQLVHLLLACAEAVAKEDYM AR+YLH LNRVVT
Sbjct: 298 -----NLNPSLMVPLPIGPEQEQDSGLQLVHLLLACAEAVAKEDYMLARKYLHHLNRVVT 352
Query: 523 PLGDSMQRVASCFXXXXXXXXXXXXXXSPNSSNPKPFTPFPSNSLEVLKIYQILYQACPY 702
PLGDSMQRVASCF P+++ PKP++ +PSNS+E+LKIYQI+YQACPY
Sbjct: 353 PLGDSMQRVASCFTEALSARLAATLTTQPSNTAPKPYSSYPSNSMEILKIYQIVYQACPY 412
Query: 703 IKFAHFTSNQAIFEAFESEERVHII 777
IKFAHFT+NQAIFEAFE+EERVH+I
Sbjct: 413 IKFAHFTANQAIFEAFEAEERVHVI 437
>ref|XP_002298647.1| GRAS family transcription factor [Populus trichocarpa]
gi|222845905|gb|EEE83452.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 679
Score = 211 bits (538), Expect = 1e-52
Identities = 127/264 (48%), Positives = 155/264 (58%), Gaps = 5/264 (1%)
Frame = +1
Query: 1 QRDGLGA--YSTMKMTGL-GCSQENFETPTTLSAMFDSSHLPNSSRFC-GSASEVGASGG 168
QRDG G KM+G G S + F+ TT+ AM D + N SRFC GS SE S G
Sbjct: 177 QRDGYGEGYQQPPKMSGSSGSSTQLFDMSTTVPAMLDCLTIQNPSRFCSGSVSET--SSG 234
Query: 169 LRISQDREVYQMNSFATLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
++Q+ +++QM S
Sbjct: 235 SPMTQESDIFQMGSIGIAPSSQKLLQENQQQPQPLPQPTTQPQPPPTTQSLQQQPQ---- 290
Query: 349 XXXXNLDHNFLGSLST-SEQEQDSGLQLVHLLLACAEAVAKEDYMTARRYLHQLNRVVTP 525
+L+H + SL SEQEQDSGLQL++LLLACAEAV+ EDYM ARRYLH LNRVV+P
Sbjct: 291 ----SLNHTLMVSLPIGSEQEQDSGLQLLNLLLACAEAVSNEDYMLARRYLHHLNRVVSP 346
Query: 526 LGDSMQRVASCFXXXXXXXXXXXXXXSPNSSNPKPFTPFPSNSLEVLKIYQILYQACPYI 705
LGDSMQRVASCF P++S+ K F+PFP NS+E+LKIYQILYQACPY+
Sbjct: 347 LGDSMQRVASCFTEALSARLAATLTTKPSTSSSKAFSPFPPNSMEILKIYQILYQACPYV 406
Query: 706 KFAHFTSNQAIFEAFESEERVHII 777
KFAHFT+NQAIFEAFE+EERVH+I
Sbjct: 407 KFAHFTANQAIFEAFETEERVHVI 430
>ref|XP_004171790.1| PREDICTED: DELLA protein GAI1-like [Cucumis sativus]
Length = 688
Score = 191 bits (484), Expect = 2e-46
Identities = 100/140 (71%), Positives = 111/140 (79%), Gaps = 2/140 (1%)
Frame = +1
Query: 364 LDHNFLGSLST-SEQEQDSGLQLVHLLLACAEAVAKEDYMTARRYLHQLNRVVTPLGDSM 540
L+H+ + L SEQEQDSGLQLVHLLLACAEAVAKEDYM ARRYLH LNRVVTP+GDSM
Sbjct: 304 LNHSLMAPLPVGSEQEQDSGLQLVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPIGDSM 363
Query: 541 QRVASCFXXXXXXXXXXXXXXS-PNSSNPKPFTPFPSNSLEVLKIYQILYQACPYIKFAH 717
QRVASCF S P+SS P PFP NSLE+LKIYQI+YQACPY+KFAH
Sbjct: 364 QRVASCFTEALTARLAATLTTSKPSSSIP----PFPQNSLEILKIYQIVYQACPYVKFAH 419
Query: 718 FTSNQAIFEAFESEERVHII 777
FT+NQAIFEAFE+EERVH+I
Sbjct: 420 FTANQAIFEAFEAEERVHVI 439
>ref|XP_004138798.1| PREDICTED: DELLA protein GAI1-like [Cucumis sativus]
Length = 685
Score = 191 bits (484), Expect = 2e-46
Identities = 100/140 (71%), Positives = 111/140 (79%), Gaps = 2/140 (1%)
Frame = +1
Query: 364 LDHNFLGSLST-SEQEQDSGLQLVHLLLACAEAVAKEDYMTARRYLHQLNRVVTPLGDSM 540
L+H+ + L SEQEQDSGLQLVHLLLACAEAVAKEDYM ARRYLH LNRVVTP+GDSM
Sbjct: 301 LNHSLMAPLPVGSEQEQDSGLQLVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPIGDSM 360
Query: 541 QRVASCFXXXXXXXXXXXXXXS-PNSSNPKPFTPFPSNSLEVLKIYQILYQACPYIKFAH 717
QRVASCF S P+SS P PFP NSLE+LKIYQI+YQACPY+KFAH
Sbjct: 361 QRVASCFTEALTARLAATLTTSKPSSSIP----PFPQNSLEILKIYQIVYQACPYVKFAH 416
Query: 718 FTSNQAIFEAFESEERVHII 777
FT+NQAIFEAFE+EERVH+I
Sbjct: 417 FTANQAIFEAFEAEERVHVI 436