BLASTX nr result

ID: Coptis23_contig00009856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009856
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reduct...   332   5e-89
gb|AFK45209.1| unknown [Lotus japonicus]                              332   7e-89
ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|1...   332   9e-89
ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus...   330   2e-88
ref|XP_002874790.1| short-chain dehydrogenase/reductase family p...   330   3e-88

>ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reductase family protein
           [Glycine max] gi|167962017|dbj|BAG09366.1| peroxisomal
           short-chain dehydrogenase/reductase family protein
           [Glycine max]
          Length = 252

 Score =  332 bits (852), Expect = 5e-89
 Identities = 180/270 (66%), Positives = 201/270 (74%)
 Frame = -3

Query: 836 KRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFGVV 657
           KRFEGKVAIVTASTQGIG  IAERLG EGASVVISSRKQ+NVD A E LR KGI+V GVV
Sbjct: 5   KRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQVLGVV 64

Query: 656 CHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKASIL 477
           CHVS+AQQRKNLIDKT++KYG+IDV+VSNAAANPSV++IL TK+SVLDKLWEINVKA+IL
Sbjct: 65  CHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVKATIL 124

Query: 476 LLKDASPHLEKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGXXXXXXXX 297
           LLKDA PHL+KGSSVV ISSIA + P   +AMYGV                         
Sbjct: 125 LLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGV----------------------TKT 162

Query: 296 XXXXXXXALATEMGPNTRVNTVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDM 117
                  ALA EM PNTRVN VAPGFVPT+FA +IT + +V+K +EEKTLL RLGTTEDM
Sbjct: 163 ALLGLTKALAAEMAPNTRVNCVAPGFVPTNFASFITSNDAVKKELEEKTLLGRLGTTEDM 222

Query: 116 GXXXXXXXXXXXAYITGETLVVGGGMPSRL 27
           G           AYITGET+VV GG PSRL
Sbjct: 223 GAAAAFLASDDAAYITGETIVVAGGTPSRL 252


>gb|AFK45209.1| unknown [Lotus japonicus]
          Length = 252

 Score =  332 bits (851), Expect = 7e-89
 Identities = 179/274 (65%), Positives = 202/274 (73%)
 Frame = -3

Query: 848 MGLMKRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEV 669
           M + KRF GKVAIVTASTQG GF IAERLG EGASVVISSRKQ+NVD A E LR KGI+V
Sbjct: 1   MEIPKRFRGKVAIVTASTQGTGFSIAERLGLEGASVVISSRKQQNVDAAAEKLRAKGIDV 60

Query: 668 FGVVCHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVK 489
             VVCHVSNAQQRKNLIDKT++KYG+IDV+VSNAAANPSV++IL TK++VLDKLWEINVK
Sbjct: 61  LAVVCHVSNAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDTVLDKLWEINVK 120

Query: 488 ASILLLKDASPHLEKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGXXXX 309
           ASILLLKDA+PH++KGSSVV ISSIA Y P   MAMYGV                     
Sbjct: 121 ASILLLKDAAPHMQKGSSVVIISSIAGYNPPPAMAMYGV--------------------- 159

Query: 308 XXXXXXXXXXXALATEMGPNTRVNTVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGT 129
                      ALA EM PNTRVN VAPGFVPT+FA +IT + ++R+ +E KT+L RLGT
Sbjct: 160 -TKTALLGLTKALAGEMAPNTRVNCVAPGFVPTNFASFITSNDAMRQELEGKTILGRLGT 218

Query: 128 TEDMGXXXXXXXXXXXAYITGETLVVGGGMPSRL 27
           TEDMG           +YITGETLVV GGMPSRL
Sbjct: 219 TEDMGAATAFLASEDASYITGETLVVSGGMPSRL 252


>ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1|
           unknown [Populus trichocarpa]
           gi|222859658|gb|EEE97205.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  332 bits (850), Expect = 9e-89
 Identities = 173/270 (64%), Positives = 199/270 (73%)
 Frame = -3

Query: 836 KRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFGVV 657
           KRFEGKV IVTASTQGIGF IAER G EGASVVISSRKQKNVDEA E L+ KGI+V GVV
Sbjct: 9   KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIKVLGVV 68

Query: 656 CHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKASIL 477
           CHVSNAQQRKNLI+ T++KYG+ID++VSNAA NPS +SIL+T+ESVLDKLWEINVKA+IL
Sbjct: 69  CHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINVKAAIL 128

Query: 476 LLKDASPHLEKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGXXXXXXXX 297
           LLKDA+PH++KGSSV+ ISSI  Y P   MAMYGV                         
Sbjct: 129 LLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGV----------------------TKT 166

Query: 296 XXXXXXXALATEMGPNTRVNTVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTEDM 117
                   LA EM P+TRVN +APGFVPTHFAD+IT + ++RK IE++TLL RLGTT+DM
Sbjct: 167 ALFGLTKVLAAEMAPHTRVNCIAPGFVPTHFADFITGNQTIRKTIEDQTLLKRLGTTDDM 226

Query: 116 GXXXXXXXXXXXAYITGETLVVGGGMPSRL 27
                       +YITGETLVV GGMPSRL
Sbjct: 227 ASAVAFLASDDASYITGETLVVAGGMPSRL 256


>ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223542252|gb|EEF43794.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 253

 Score =  330 bits (847), Expect = 2e-88
 Identities = 175/272 (64%), Positives = 203/272 (74%)
 Frame = -3

Query: 842 LMKRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFG 663
           L KRFEGKVA+VTASTQGIGF IA RL  EGAS+V+SSRKQKNVDEAVE L+ +GI+V G
Sbjct: 4   LAKRFEGKVALVTASTQGIGFAIARRLALEGASLVVSSRKQKNVDEAVEKLQAEGIQVLG 63

Query: 662 VVCHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKAS 483
           VVCHVSNAQ RK+LI KT+E+YG+IDVIVSNAAANPS E+IL T+ESVLDKLWEINVKAS
Sbjct: 64  VVCHVSNAQHRKHLIHKTVERYGKIDVIVSNAAANPSTEAILKTQESVLDKLWEINVKAS 123

Query: 482 ILLLKDASPHLEKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGXXXXXX 303
           ILLL+DA+P+L+KGSSV+ +SSI+ Y P   MAMYGV                       
Sbjct: 124 ILLLQDAAPYLQKGSSVILVSSISGYSPPASMAMYGV----------------------T 161

Query: 302 XXXXXXXXXALATEMGPNTRVNTVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTE 123
                    ALA EM P+TRVN +APGFVPTHFAD++TK+ +VRK+IEEKT LNRLGTT+
Sbjct: 162 KTALLGLTKALAAEMAPDTRVNCIAPGFVPTHFADFLTKNEAVRKSIEEKTFLNRLGTTQ 221

Query: 122 DMGXXXXXXXXXXXAYITGETLVVGGGMPSRL 27
           DM            +YITGETLVV GGM SRL
Sbjct: 222 DMAAAAAFLASDEASYITGETLVVAGGMTSRL 253


>ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 254

 Score =  330 bits (846), Expect = 3e-88
 Identities = 172/272 (63%), Positives = 200/272 (73%)
 Frame = -3

Query: 842 LMKRFEGKVAIVTASTQGIGFGIAERLGQEGASVVISSRKQKNVDEAVENLRGKGIEVFG 663
           L +R EGKVAIVTASTQGIGFGI ER G EGASVV+SSRKQ NVDEAV  L+ KGI+ +G
Sbjct: 5   LPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQANVDEAVAKLKSKGIDAYG 64

Query: 662 VVCHVSNAQQRKNLIDKTIEKYGRIDVIVSNAAANPSVESILDTKESVLDKLWEINVKAS 483
           +VCHVSNAQ R+NL++KT++KYG+ID++V NAAANPS + IL +KE+VLDKLWEINVK+S
Sbjct: 65  IVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKSS 124

Query: 482 ILLLKDASPHLEKGSSVVFISSIAAYQPQGGMAMYGVXXXXXXXXXXXXXTEMGXXXXXX 303
           ILLL+D +PHLEKGSSV+FI+SIA +QPQG MAMYGV                       
Sbjct: 125 ILLLQDMAPHLEKGSSVIFITSIAGFQPQGAMAMYGV----------------------T 162

Query: 302 XXXXXXXXXALATEMGPNTRVNTVAPGFVPTHFADYITKDASVRKAIEEKTLLNRLGTTE 123
                    ALA EM P+TRVN VAPGFVPTHFA +IT  + VR+ IEEKTLLNRLGTT 
Sbjct: 163 KTALLGLTKALAAEMAPDTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTG 222

Query: 122 DMGXXXXXXXXXXXAYITGETLVVGGGMPSRL 27
           DM            +YITGETLVV GGMPSRL
Sbjct: 223 DMAAAAAFLASDDSSYITGETLVVAGGMPSRL 254


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