BLASTX nr result

ID: Coptis23_contig00009855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009855
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264585.2| PREDICTED: calcium-transporting ATPase, endo...   243   9e-63
emb|CAN66975.1| hypothetical protein VITISV_022077 [Vitis vinifera]   243   9e-63
ref|XP_002320213.1| endoplasmic reticulum [ER]-type calcium ATPa...   225   3e-57
ref|NP_001234073.1| calcium-transporting ATPase, endoplasmic ret...   221   4e-56
gb|AAL35972.1| type IIA calcium ATPase [Medicago truncatula]          216   1e-54

>ref|XP_002264585.2| PREDICTED: calcium-transporting ATPase, endoplasmic
           reticulum-type-like [Vitis vinifera]
          Length = 1051

 Score =  243 bits (621), Expect = 9e-63
 Identities = 115/137 (83%), Positives = 123/137 (89%)
 Frame = -2

Query: 413 TTNQMSVSQFFTLGGKTTISRIFNVEGTTYDPKDGGIVGWTCYNMDANLQSMAEICAVCN 234
           TTNQMS ++FFTLGGK T SRIF+VEG+TYDPKDGGIV W CYNMDANLQ+MAEICAVCN
Sbjct: 372 TTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDGGIVDWNCYNMDANLQAMAEICAVCN 431

Query: 233 DAGVFCKGRLFQATGLPTEAALKVLAEKMGVPDTKARNRIRDTQFAADCAIDRSNVKLGC 54
           DAG+FC GRLF+ATGLPTEAALKVL EKMGVPD KARN+IRDTQ AA   IDRS VKLGC
Sbjct: 432 DAGIFCNGRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDTQLAASYLIDRSTVKLGC 491

Query: 53  SEWWTKRSKRVATLEFD 3
            EWWTKRSKRVATLEFD
Sbjct: 492 CEWWTKRSKRVATLEFD 508


>emb|CAN66975.1| hypothetical protein VITISV_022077 [Vitis vinifera]
          Length = 1051

 Score =  243 bits (621), Expect = 9e-63
 Identities = 115/137 (83%), Positives = 123/137 (89%)
 Frame = -2

Query: 413 TTNQMSVSQFFTLGGKTTISRIFNVEGTTYDPKDGGIVGWTCYNMDANLQSMAEICAVCN 234
           TTNQMS ++FFTLGGK T SRIF+VEG+TYDPKDGGIV W CYNMDANLQ+MAEICAVCN
Sbjct: 372 TTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDGGIVDWNCYNMDANLQAMAEICAVCN 431

Query: 233 DAGVFCKGRLFQATGLPTEAALKVLAEKMGVPDTKARNRIRDTQFAADCAIDRSNVKLGC 54
           DAG+FC GRLF+ATGLPTEAALKVL EKMGVPD KARN+IRDTQ AA   IDRS VKLGC
Sbjct: 432 DAGIFCNGRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDTQLAASYLIDRSTVKLGC 491

Query: 53  SEWWTKRSKRVATLEFD 3
            EWWTKRSKRVATLEFD
Sbjct: 492 CEWWTKRSKRVATLEFD 508


>ref|XP_002320213.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus
           trichocarpa] gi|222860986|gb|EEE98528.1| endoplasmic
           reticulum [ER]-type calcium ATPase [Populus trichocarpa]
          Length = 1045

 Score =  225 bits (573), Expect = 3e-57
 Identities = 110/137 (80%), Positives = 118/137 (86%)
 Frame = -2

Query: 413 TTNQMSVSQFFTLGGKTTISRIFNVEGTTYDPKDGGIVGWTCYNMDANLQSMAEICAVCN 234
           TTNQMSV++FFTLGGKTT SRIF VEGTTYDPKDGGIV WTCYNMDANLQ+MAEICAVCN
Sbjct: 372 TTNQMSVTEFFTLGGKTTSSRIFRVEGTTYDPKDGGIVDWTCYNMDANLQAMAEICAVCN 431

Query: 233 DAGVFCKGRLFQATGLPTEAALKVLAEKMGVPDTKARNRIRDTQFAADCAIDRSNVKLGC 54
           DAG+FC GRLF+ATGLPTEAALKVL EKMGVPD KAR +IRD Q AA+  IDRS      
Sbjct: 432 DAGIFCDGRLFRATGLPTEAALKVLVEKMGVPDAKAREKIRDMQLAANYLIDRS------ 485

Query: 53  SEWWTKRSKRVATLEFD 3
            EWWTKR KR+ATLEFD
Sbjct: 486 CEWWTKRLKRLATLEFD 502


>ref|NP_001234073.1| calcium-transporting ATPase, endoplasmic reticulum-type [Solanum
           lycopersicum] gi|68052031|sp|Q42883.1|ECAP_SOLLC
           RecName: Full=Calcium-transporting ATPase, endoplasmic
           reticulum-type gi|170378|gb|AAA34138.1| Ca2+-ATPase
           [Solanum lycopersicum] gi|4206311|gb|AAD11617.1|
           Ca2+-ATPase [Solanum lycopersicum]
           gi|4206313|gb|AAD11618.1| Ca2+-ATPase [Solanum
           lycopersicum]
          Length = 1048

 Score =  221 bits (564), Expect = 4e-56
 Identities = 105/137 (76%), Positives = 115/137 (83%)
 Frame = -2

Query: 413 TTNQMSVSQFFTLGGKTTISRIFNVEGTTYDPKDGGIVGWTCYNMDANLQSMAEICAVCN 234
           TTNQMSVS+FFTLG KTT  R+F VEGTTYDPKDGGI+ W C  MDANL  MAEICA+CN
Sbjct: 372 TTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANLLLMAEICAICN 431

Query: 233 DAGVFCKGRLFQATGLPTEAALKVLAEKMGVPDTKARNRIRDTQFAADCAIDRSNVKLGC 54
           DAGVFC GRLF+ATGLPTEAALKVL EKMGVPD+KAR +IRD Q  +   IDR+ VKLGC
Sbjct: 432 DAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSYLIDRNTVKLGC 491

Query: 53  SEWWTKRSKRVATLEFD 3
            +WW KRSKRVATLEFD
Sbjct: 492 CDWWMKRSKRVATLEFD 508


>gb|AAL35972.1| type IIA calcium ATPase [Medicago truncatula]
          Length = 1047

 Score =  216 bits (551), Expect = 1e-54
 Identities = 101/137 (73%), Positives = 115/137 (83%)
 Frame = -2

Query: 413 TTNQMSVSQFFTLGGKTTISRIFNVEGTTYDPKDGGIVGWTCYNMDANLQSMAEICAVCN 234
           TTNQMS ++FFTLGGKTT  R+ +VEGTTYDPKDGGIV WTCYNMDANL +MAEICAVCN
Sbjct: 369 TTNQMSATEFFTLGGKTTACRVISVEGTTYDPKDGGIVDWTCYNMDANLLAMAEICAVCN 428

Query: 233 DAGVFCKGRLFQATGLPTEAALKVLAEKMGVPDTKARNRIRDTQFAADCAIDRSNVKLGC 54
           DAGV+  GRLF+ATGLPTEAALKVL EKMG PDTK+RN+  D   A +  +D + +KLGC
Sbjct: 429 DAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDTKSRNKTHDALVATNNMVDCNTLKLGC 488

Query: 53  SEWWTKRSKRVATLEFD 3
            EWW +RSKRVATLEFD
Sbjct: 489 CEWWNRRSKRVATLEFD 505


Top