BLASTX nr result

ID: Coptis23_contig00009849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009849
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   219   5e-55
ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|2...   216   5e-54
ref|XP_002515075.1| conserved hypothetical protein [Ricinus comm...   213   3e-53
ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...   213   5e-53
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple...   213   5e-53

>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score =  219 bits (559), Expect = 5e-55
 Identities = 120/216 (55%), Positives = 148/216 (68%)
 Frame = -3

Query: 648 NNIISSLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEKKLN 469
           + + ++L  GT EAL Q+R LTDVGAMTR LHECIAYQR ++LEL+ LLS +TDL+K+L+
Sbjct: 379 DQVTAALRLGTPEALDQVRKLTDVGAMTRILHECIAYQRALELELDNLLSQRTDLDKQLS 438

Query: 468 NLSKSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKVREL 289
           NL KSAQ                                              S KVREL
Sbjct: 439 NLQKSAQVLDIVKADSDHILTNVRSTCDLADQV--------------------SGKVREL 478

Query: 288 DLAQSRVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSGSVE 109
           DLAQSRV++TLSRIDAIVERGNC+EGV+KAL  ED+E+AA++V+TFL IDS +KDSGS +
Sbjct: 479 DLAQSRVNSTLSRIDAIVERGNCIEGVQKALETEDYESAAKYVQTFLRIDSEYKDSGSDQ 538

Query: 108 REELLNSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1
           RE+L+ SK+ LEGIVRKRL AAVDQRDH +ILRFV+
Sbjct: 539 REQLMASKKQLEGIVRKRLAAAVDQRDHPTILRFVR 574


>ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|222844401|gb|EEE81948.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  216 bits (550), Expect = 5e-54
 Identities = 119/219 (54%), Positives = 147/219 (67%)
 Frame = -3

Query: 657 EETNNIISSLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEK 478
           +ET     S+ FGT EAL  +RNLTDVGAMTR LHECIAYQRG+DL L+TLLS ++DL+K
Sbjct: 30  DETTLNSPSIKFGTPEALDHVRNLTDVGAMTRLLHECIAYQRGLDLNLDTLLSQRSDLDK 89

Query: 477 KLNNLSKSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKV 298
            L++L KSA                                               S+KV
Sbjct: 90  NLHHLQKSADVLEIVKADFDHMHSNVRSTCDLADHV--------------------SAKV 129

Query: 297 RELDLAQSRVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSG 118
           RELDLAQSRV++TL RIDAIVERGNC+EGVK AL  ED+E+AA++V+TFL+ID+ +KDSG
Sbjct: 130 RELDLAQSRVNSTLLRIDAIVERGNCIEGVKNALEKEDYESAAKYVQTFLQIDAKYKDSG 189

Query: 117 SVEREELLNSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1
           S +RE+LL SKR LEGIV K+L AAVD RDHS+ILRF++
Sbjct: 190 SDQREQLLASKRTLEGIVGKKLSAAVDSRDHSTILRFIR 228


>ref|XP_002515075.1| conserved hypothetical protein [Ricinus communis]
           gi|223545555|gb|EEF47059.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 746

 Score =  213 bits (543), Expect = 3e-53
 Identities = 116/220 (52%), Positives = 147/220 (66%)
 Frame = -3

Query: 660 NEETNNIISSLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLE 481
           ++E+   +SS+ FGT EAL  +RNLTDVGAMTR LHECIAYQR +DL+L+ LL+ +TDL+
Sbjct: 15  DDESTTTVSSIKFGTREALDHVRNLTDVGAMTRLLHECIAYQRALDLDLDNLLAQRTDLD 74

Query: 480 KKLNNLSKSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSK 301
           K L +L KSA+                                              S+K
Sbjct: 75  KNLIHLQKSAEVLDIVKSDSDYMLSNVRSTCDLADHV--------------------SAK 114

Query: 300 VRELDLAQSRVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDS 121
           VRELDLAQSRV+ TLSRIDAIVERGNC++GVK AL +ED+E AA +V+TFL+ID+ +KDS
Sbjct: 115 VRELDLAQSRVNITLSRIDAIVERGNCIDGVKNALESEDYEAAANYVQTFLQIDAKYKDS 174

Query: 120 GSVEREELLNSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1
           GS  R++LL SK+ LEGIVRKRL  AVDQRDH +ILRF++
Sbjct: 175 GSDLRDQLLASKKQLEGIVRKRLAIAVDQRDHQTILRFIR 214


>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 4-like [Cucumis sativus]
          Length = 751

 Score =  213 bits (542), Expect = 5e-53
 Identities = 115/211 (54%), Positives = 145/211 (68%)
 Frame = -3

Query: 633 SLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEKKLNNLSKS 454
           S+ FG+TEAL  IR LTDVGAMTR LHECIAYQR +DL L+ LLS ++DL+K+L  L +S
Sbjct: 23  SIKFGSTEALEHIRTLTDVGAMTRLLHECIAYQRALDLNLDNLLSQRSDLDKQLVQLQRS 82

Query: 453 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKVRELDLAQS 274
           A+                                              S+KVR+LDLAQS
Sbjct: 83  AEVIGIVEADADYMLSNVTSTCDLADQV--------------------SAKVRDLDLAQS 122

Query: 273 RVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSGSVEREELL 94
           RV++TL RIDAIVERGNC+EGVKKAL +ED+E+AA++V+TFL+ID  +KDSGS +RE+LL
Sbjct: 123 RVNSTLLRIDAIVERGNCIEGVKKALDSEDYESAAKYVQTFLQIDDKYKDSGSDQREQLL 182

Query: 93  NSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1
            SK++LEGIVRK+L AAVDQRDHS ILRF++
Sbjct: 183 ESKKLLEGIVRKKLSAAVDQRDHSMILRFIR 213


>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Cucumis sativus]
          Length = 751

 Score =  213 bits (542), Expect = 5e-53
 Identities = 115/211 (54%), Positives = 145/211 (68%)
 Frame = -3

Query: 633 SLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEKKLNNLSKS 454
           S+ FG+TEAL  IR LTDVGAMTR LHECIAYQR +DL L+ LLS ++DL+K+L  L +S
Sbjct: 23  SIKFGSTEALEHIRTLTDVGAMTRLLHECIAYQRALDLNLDNLLSQRSDLDKQLVQLQRS 82

Query: 453 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKVRELDLAQS 274
           A+                                              S+KVR+LDLAQS
Sbjct: 83  AEVIGIVEADADYMLSNVTSTCDLADQV--------------------SAKVRDLDLAQS 122

Query: 273 RVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSGSVEREELL 94
           RV++TL RIDAIVERGNC+EGVKKAL +ED+E+AA++V+TFL+ID  +KDSGS +RE+LL
Sbjct: 123 RVNSTLLRIDAIVERGNCIEGVKKALDSEDYESAAKYVQTFLQIDDKYKDSGSDQREQLL 182

Query: 93  NSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1
            SK++LEGIVRK+L AAVDQRDHS ILRF++
Sbjct: 183 ESKKLLEGIVRKKLSAAVDQRDHSMILRFIR 213


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