BLASTX nr result
ID: Coptis23_contig00009849
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00009849 (863 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple... 219 5e-55 ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|2... 216 5e-54 ref|XP_002515075.1| conserved hypothetical protein [Ricinus comm... 213 3e-53 ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol... 213 5e-53 ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple... 213 5e-53 >ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis vinifera] Length = 1105 Score = 219 bits (559), Expect = 5e-55 Identities = 120/216 (55%), Positives = 148/216 (68%) Frame = -3 Query: 648 NNIISSLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEKKLN 469 + + ++L GT EAL Q+R LTDVGAMTR LHECIAYQR ++LEL+ LLS +TDL+K+L+ Sbjct: 379 DQVTAALRLGTPEALDQVRKLTDVGAMTRILHECIAYQRALELELDNLLSQRTDLDKQLS 438 Query: 468 NLSKSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKVREL 289 NL KSAQ S KVREL Sbjct: 439 NLQKSAQVLDIVKADSDHILTNVRSTCDLADQV--------------------SGKVREL 478 Query: 288 DLAQSRVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSGSVE 109 DLAQSRV++TLSRIDAIVERGNC+EGV+KAL ED+E+AA++V+TFL IDS +KDSGS + Sbjct: 479 DLAQSRVNSTLSRIDAIVERGNCIEGVQKALETEDYESAAKYVQTFLRIDSEYKDSGSDQ 538 Query: 108 REELLNSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1 RE+L+ SK+ LEGIVRKRL AAVDQRDH +ILRFV+ Sbjct: 539 REQLMASKKQLEGIVRKRLAAAVDQRDHPTILRFVR 574 >ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|222844401|gb|EEE81948.1| predicted protein [Populus trichocarpa] Length = 562 Score = 216 bits (550), Expect = 5e-54 Identities = 119/219 (54%), Positives = 147/219 (67%) Frame = -3 Query: 657 EETNNIISSLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEK 478 +ET S+ FGT EAL +RNLTDVGAMTR LHECIAYQRG+DL L+TLLS ++DL+K Sbjct: 30 DETTLNSPSIKFGTPEALDHVRNLTDVGAMTRLLHECIAYQRGLDLNLDTLLSQRSDLDK 89 Query: 477 KLNNLSKSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKV 298 L++L KSA S+KV Sbjct: 90 NLHHLQKSADVLEIVKADFDHMHSNVRSTCDLADHV--------------------SAKV 129 Query: 297 RELDLAQSRVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSG 118 RELDLAQSRV++TL RIDAIVERGNC+EGVK AL ED+E+AA++V+TFL+ID+ +KDSG Sbjct: 130 RELDLAQSRVNSTLLRIDAIVERGNCIEGVKNALEKEDYESAAKYVQTFLQIDAKYKDSG 189 Query: 117 SVEREELLNSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1 S +RE+LL SKR LEGIV K+L AAVD RDHS+ILRF++ Sbjct: 190 SDQREQLLASKRTLEGIVGKKLSAAVDSRDHSTILRFIR 228 >ref|XP_002515075.1| conserved hypothetical protein [Ricinus communis] gi|223545555|gb|EEF47059.1| conserved hypothetical protein [Ricinus communis] Length = 746 Score = 213 bits (543), Expect = 3e-53 Identities = 116/220 (52%), Positives = 147/220 (66%) Frame = -3 Query: 660 NEETNNIISSLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLE 481 ++E+ +SS+ FGT EAL +RNLTDVGAMTR LHECIAYQR +DL+L+ LL+ +TDL+ Sbjct: 15 DDESTTTVSSIKFGTREALDHVRNLTDVGAMTRLLHECIAYQRALDLDLDNLLAQRTDLD 74 Query: 480 KKLNNLSKSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSK 301 K L +L KSA+ S+K Sbjct: 75 KNLIHLQKSAEVLDIVKSDSDYMLSNVRSTCDLADHV--------------------SAK 114 Query: 300 VRELDLAQSRVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDS 121 VRELDLAQSRV+ TLSRIDAIVERGNC++GVK AL +ED+E AA +V+TFL+ID+ +KDS Sbjct: 115 VRELDLAQSRVNITLSRIDAIVERGNCIDGVKNALESEDYEAAANYVQTFLQIDAKYKDS 174 Query: 120 GSVEREELLNSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1 GS R++LL SK+ LEGIVRKRL AVDQRDH +ILRF++ Sbjct: 175 GSDLRDQLLASKKQLEGIVRKRLAIAVDQRDHQTILRFIR 214 >ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 4-like [Cucumis sativus] Length = 751 Score = 213 bits (542), Expect = 5e-53 Identities = 115/211 (54%), Positives = 145/211 (68%) Frame = -3 Query: 633 SLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEKKLNNLSKS 454 S+ FG+TEAL IR LTDVGAMTR LHECIAYQR +DL L+ LLS ++DL+K+L L +S Sbjct: 23 SIKFGSTEALEHIRTLTDVGAMTRLLHECIAYQRALDLNLDNLLSQRSDLDKQLVQLQRS 82 Query: 453 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKVRELDLAQS 274 A+ S+KVR+LDLAQS Sbjct: 83 AEVIGIVEADADYMLSNVTSTCDLADQV--------------------SAKVRDLDLAQS 122 Query: 273 RVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSGSVEREELL 94 RV++TL RIDAIVERGNC+EGVKKAL +ED+E+AA++V+TFL+ID +KDSGS +RE+LL Sbjct: 123 RVNSTLLRIDAIVERGNCIEGVKKALDSEDYESAAKYVQTFLQIDDKYKDSGSDQREQLL 182 Query: 93 NSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1 SK++LEGIVRK+L AAVDQRDHS ILRF++ Sbjct: 183 ESKKLLEGIVRKKLSAAVDQRDHSMILRFIR 213 >ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Cucumis sativus] Length = 751 Score = 213 bits (542), Expect = 5e-53 Identities = 115/211 (54%), Positives = 145/211 (68%) Frame = -3 Query: 633 SLNFGTTEALSQIRNLTDVGAMTRYLHECIAYQRGIDLELETLLSSKTDLEKKLNNLSKS 454 S+ FG+TEAL IR LTDVGAMTR LHECIAYQR +DL L+ LLS ++DL+K+L L +S Sbjct: 23 SIKFGSTEALEHIRTLTDVGAMTRLLHECIAYQRALDLNLDNLLSQRSDLDKQLVQLQRS 82 Query: 453 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKVRELDLAQS 274 A+ S+KVR+LDLAQS Sbjct: 83 AEVIGIVEADADYMLSNVTSTCDLADQV--------------------SAKVRDLDLAQS 122 Query: 273 RVSTTLSRIDAIVERGNCVEGVKKALGAEDFENAARFVKTFLEIDSMFKDSGSVEREELL 94 RV++TL RIDAIVERGNC+EGVKKAL +ED+E+AA++V+TFL+ID +KDSGS +RE+LL Sbjct: 123 RVNSTLLRIDAIVERGNCIEGVKKALDSEDYESAAKYVQTFLQIDDKYKDSGSDQREQLL 182 Query: 93 NSKRVLEGIVRKRLGAAVDQRDHSSILRFVK 1 SK++LEGIVRK+L AAVDQRDHS ILRF++ Sbjct: 183 ESKKLLEGIVRKKLSAAVDQRDHSMILRFIR 213