BLASTX nr result

ID: Coptis23_contig00009839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009839
         (1689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFN59055.1| hypothetical protein CHLNCDRAFT_55974 [Chlorella ...   311   e-160
gb|EIE26840.1| putative leucyl tRNA synthetase [Coccomyxa subell...   315   e-157
ref|XP_002948892.1| hypothetical protein VOLCADRAFT_89222 [Volvo...   309   e-155
ref|XP_003059586.1| predicted protein [Micromonas pusilla CCMP15...   288   e-153
ref|YP_003570999.1| leucyl-tRNA synthetase [Salinibacter ruber M...   295   e-152

>gb|EFN59055.1| hypothetical protein CHLNCDRAFT_55974 [Chlorella variabilis]
          Length = 873

 Score =  311 bits (796), Expect(2) = e-160
 Identities = 162/298 (54%), Positives = 204/298 (68%), Gaps = 3/298 (1%)
 Frame = +1

Query: 646  GEVEYTACRDIDGKLISPDSTDVFMEKFQERVR---EEKVIKSGDSFVLKEDPSIRVIAR 816
            GEVEYT  RD  G   +  +         E +R    E     G  +VLK DPS++V  R
Sbjct: 590  GEVEYTVHRDAAGAYCAEGTPGA------ETIRLDPSEVEAAGGGGYVLKADPSVKVSHR 643

Query: 817  AHKMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIEGVHRFLGRTWRL 996
            AHKMSKSRGNV+NPDDVV +YGADSLRLYEMFMGPLRD+K WST G+EGVHRFL R +RL
Sbjct: 644  AHKMSKSRGNVVNPDDVVWQYGADSLRLYEMFMGPLRDTKVWSTKGVEGVHRFLARVYRL 703

Query: 997  IVGQPLSDGSFRDGTVAIDDEPNFEQIRSLHKCIEKVTEEIEGTRFNTGISAMMEFVNAA 1176
            +  QPLSD             P+ +Q+R LH+ I+KVTEE E  RFNTG++AMMEFVN A
Sbjct: 704  VTEQPLSDAP-----------PSQDQLRLLHQTIKKVTEETEEMRFNTGLAAMMEFVNGA 752

Query: 1177 YKWNKHPKTIIEAFVLLLSPYAPHMAEELWFRLGHSNSLAYEQFPKANPDYLKDSTIILP 1356
            YKW   PK  +E F+LLL+PYAPH+AEE+W  LGHS SLAYE +P+A+   L  +T  LP
Sbjct: 753  YKWEARPKAALEPFLLLLAPYAPHLAEEMWSVLGHSGSLAYEPWPEADESLLVQTTYNLP 812

Query: 1357 VQINGKTRGTIEVDKTCNEEEAIRIASADRKLSKYLVGKSIKKRIYVPGKILNIILDR 1530
            VQ+NGK RG++EV+    ++ A+  A A   ++K L GK +KK I+VPGKILN+I+ +
Sbjct: 813  VQVNGKMRGSVEVEVDIGQDGAVVAAQAIPAVAKQLDGKPVKKVIFVPGKILNLIVSK 870



 Score =  283 bits (723), Expect(2) = e-160
 Identities = 126/209 (60%), Positives = 159/209 (76%)
 Frame = +2

Query: 29   EPYAGEGIIINSSNTAVGLNINGLLSKDAASKVIEWAGNTGHGRKKVNYKLRDWLFARQR 208
            E +   G+ +NS++   GL++NGL +  A +  IEW  + G G ++VNYKLRDWLFARQR
Sbjct: 381  EAFTAPGVAVNSASVESGLDLNGLPTAAAKAAAIEWLESKGLGHRQVNYKLRDWLFARQR 440

Query: 209  YWGEPFPVAFLDSTNEIVSLPETELPIILPELDDFTPTGTGEPPLAKAVSWVKIKDPMSG 388
            YWGEPFP+ + + + E  ++ E ELP++LP+ DDF P+GT +PPLAK   WV   D  +G
Sbjct: 441  YWGEPFPIVYPEGSEEPAAISEAELPLVLPDTDDFQPSGTPDPPLAKCADWVAATDA-AG 499

Query: 389  KPATRETSTMPQWAGSCWYYLRFMDPKNTEALVAKEKEMYWGPVDVYVGGAEHSVLHLLY 568
            +PA RETSTMPQWAGSCWYYLR++DP NT  LV +E E YW PVD+YVGGAEH+VLHLLY
Sbjct: 500  RPARRETSTMPQWAGSCWYYLRYIDPNNTSRLVGEEAEKYWMPVDLYVGGAEHAVLHLLY 559

Query: 569  ARFWHKVLYDIGVVSTKEPFQCLINQGKL 655
            ARFWHKVLYDIG VST EPFQ L++QG +
Sbjct: 560  ARFWHKVLYDIGAVSTPEPFQRLVSQGMI 588


>gb|EIE26840.1| putative leucyl tRNA synthetase [Coccomyxa subellipsoidea C-169]
          Length = 891

 Score =  315 bits (807), Expect(2) = e-157
 Identities = 160/298 (53%), Positives = 212/298 (71%), Gaps = 3/298 (1%)
 Frame = +1

Query: 646  GEVEYTACRDIDGKLIS---PDSTDVFMEKFQERVREEKVIKSGDSFVLKEDPSIRVIAR 816
            GEVEYTA +D  G+ +    P++T V       RV E +V K G+ FVL+ DPS+RV  R
Sbjct: 612  GEVEYTAYKDAQGQYVDENHPEATAV-------RVEEGQVDKKGNGFVLRSDPSVRVSTR 664

Query: 817  AHKMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIEGVHRFLGRTWRL 996
            AHKMSKSRGNV+NPDDVV+ YGADSLRLYEMFMGP+R++K WST  +EGVHRFL R++RL
Sbjct: 665  AHKMSKSRGNVVNPDDVVTMYGADSLRLYEMFMGPIRETKVWSTKSVEGVHRFLARSYRL 724

Query: 997  IVGQPLSDGSFRDGTVAIDDEPNFEQIRSLHKCIEKVTEEIEGTRFNTGISAMMEFVNAA 1176
            + G  ++D            EP  +Q+R LH  I++VTEE E  RFNTGISA+MEFVN+A
Sbjct: 725  VTGSNVADV-----------EPTKDQLRLLHATIKRVTEETEELRFNTGISALMEFVNSA 773

Query: 1177 YKWNKHPKTIIEAFVLLLSPYAPHMAEELWFRLGHSNSLAYEQFPKANPDYLKDSTIILP 1356
            +KW + P++++E FVLLL+PYAPH+AEELW  LGHS++L YE +P  N + L   T  LP
Sbjct: 774  FKWEEVPRSVLEPFVLLLAPYAPHIAEELWQVLGHSDTLTYEPWPTYNEELLVSDTFNLP 833

Query: 1357 VQINGKTRGTIEVDKTCNEEEAIRIASADRKLSKYLVGKSIKKRIYVPGKILNIILDR 1530
            VQ+NGK RGT+EV K  ++ +A     +   +SK+L GK +KK I+VPG+I+N I+ +
Sbjct: 834  VQVNGKLRGTVEVSKQISQADAEVAGRSITSVSKFLEGKPLKKVIFVPGRIVNFIVGK 891



 Score =  268 bits (685), Expect(2) = e-157
 Identities = 119/210 (56%), Positives = 155/210 (73%)
 Frame = +2

Query: 26   EEPYAGEGIIINSSNTAVGLNINGLLSKDAASKVIEWAGNTGHGRKKVNYKLRDWLFARQ 205
            E P+ G+G   +SS  A GL+++G  + +AA+ V+ W    G G  ++N+KLRDWLFARQ
Sbjct: 401  ELPFTGKGTATSSSCAAAGLSLDGQGTAEAAASVVRWLEQQGKGAAQINFKLRDWLFARQ 460

Query: 206  RYWGEPFPVAFLDSTNEIVSLPETELPIILPELDDFTPTGTGEPPLAKAVSWVKIKDPMS 385
            RYWGEPFP+ + + ++E   + E +LP+ LPE D+F P+GT E PLA    WV   DP +
Sbjct: 461  RYWGEPFPIVYAEGSDEPEGISEEDLPLTLPETDNFRPSGTPESPLANITEWVHFVDPKT 520

Query: 386  GKPATRETSTMPQWAGSCWYYLRFMDPKNTEALVAKEKEMYWGPVDVYVGGAEHSVLHLL 565
            GK   RETSTMPQWAGSCWYYLR++ P NT+  +  E E YW PVD+YVGGAEH+VLHLL
Sbjct: 521  GKRYRRETSTMPQWAGSCWYYLRYLQPWNTDRAIDPEVEKYWLPVDLYVGGAEHAVLHLL 580

Query: 566  YARFWHKVLYDIGVVSTKEPFQCLINQGKL 655
            YARFWHKVL+D+GVVSTKEPF+ L++QG +
Sbjct: 581  YARFWHKVLFDLGVVSTKEPFRRLVSQGMI 610


>ref|XP_002948892.1| hypothetical protein VOLCADRAFT_89222 [Volvox carteri f. nagariensis]
            gi|300266083|gb|EFJ50272.1| hypothetical protein
            VOLCADRAFT_89222 [Volvox carteri f. nagariensis]
          Length = 938

 Score =  309 bits (791), Expect(2) = e-155
 Identities = 163/294 (55%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
 Frame = +1

Query: 646  GEVEYTACRD-IDGKLISPDSTDVFMEKFQERVREEKVIKSGDSFVLKEDPSIRVIARAH 822
            GEVEYTA RD   G+ +   +      K  E     +V K GD +VLK DP +RV ARAH
Sbjct: 648  GEVEYTAFRDGASGEWMEEGAPGAVPVKLSE----SEVDKRGDGYVLKTDPRVRVSARAH 703

Query: 823  KMSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIEGVHRFLGRTWRLIV 1002
            KMSKSRGNVINPDDVV+++GADSLRLYEMFMGPLRD+K WST G+EGVHRFL R WRL  
Sbjct: 704  KMSKSRGNVINPDDVVAQFGADSLRLYEMFMGPLRDTKVWSTRGVEGVHRFLARVWRLFE 763

Query: 1003 GQPLSDGSFRDGTVAIDDEPNFEQIRSLHKCIEKVTEEIEGTRFNTGISAMMEFVNAAYK 1182
            G               ++ P+ EQ+R LH+ I+KV+ E E  RFNT I+AMMEFVN   K
Sbjct: 764  GG------------VSEEPPSREQLRLLHQTIKKVSIETEELRFNTAIAAMMEFVNGVTK 811

Query: 1183 -WNKHPKTIIEAFVLLLSPYAPHMAEELWFRLGHSNSLAYEQFPKANPDYLKDSTIILPV 1359
             WN  P+  +E FVLLLSPYAPH++EELW R GHS SLAYE +P A+   L   T+ LPV
Sbjct: 812  SWNNRPRAALEPFVLLLSPYAPHLSEELWARCGHSTSLAYESWPAADEGLLVVDTVNLPV 871

Query: 1360 QINGKTRGTIEVDKTCNEEEAIRIASADRKLSKYLVGKSIKKRIYVPGKILNII 1521
            Q+NGKTRGT++V    ++++A+  A  +  ++KY   K IKK IYVPGKILN+I
Sbjct: 872  QVNGKTRGTVQVAAAASQDDAMAAAVGNANVAKYTADKEIKKVIYVPGKILNLI 925



 Score =  269 bits (688), Expect(2) = e-155
 Identities = 128/211 (60%), Positives = 156/211 (73%), Gaps = 1/211 (0%)
 Frame = +2

Query: 26   EEPYAGEGIIINSSNTAVGLNINGLLSKDAASKVIEWAGNTGHGRKKVNYKLRDWLFARQ 205
            E PY   G+ +NSS++A  L+I+G  S+ A   V+ W    G G ++VNYKLRDWLFARQ
Sbjct: 438  ELPYTEPGVAVNSSSSA--LSIDGQSSEVARGSVVSWLEGAGAGSRQVNYKLRDWLFARQ 495

Query: 206  RYWGEPFPVAFLDSTNEIVSLPETELPIILPELDDFTPTGTGEPPLAKAVSWVKIKDPMS 385
            RYWGEPFP+ + + ++E V LPE+ LP+ LP+ D F P+GT E PLA   SWV   DP  
Sbjct: 496  RYWGEPFPLVYPEGSDEAVPLPESSLPLTLPDTDRFKPSGTPESPLAAIPSWVNTVDPRD 555

Query: 386  G-KPATRETSTMPQWAGSCWYYLRFMDPKNTEALVAKEKEMYWGPVDVYVGGAEHSVLHL 562
            G  PA RETSTMPQWAGSCWYYLR++ P+   ALV  E E YW PVD+YVGGAEH+VLHL
Sbjct: 556  GVTPARRETSTMPQWAGSCWYYLRYISPRFGAALVDAEAEKYWMPVDLYVGGAEHAVLHL 615

Query: 563  LYARFWHKVLYDIGVVSTKEPFQCLINQGKL 655
            LYARFWHKVLYD+GVVST EPFQ L++QG +
Sbjct: 616  LYARFWHKVLYDLGVVSTPEPFQRLVSQGMI 646


>ref|XP_003059586.1| predicted protein [Micromonas pusilla CCMP1545]
            gi|226459422|gb|EEH56718.1| predicted protein [Micromonas
            pusilla CCMP1545]
          Length = 1061

 Score =  288 bits (738), Expect(2) = e-153
 Identities = 150/293 (51%), Positives = 192/293 (65%), Gaps = 1/293 (0%)
 Frame = +1

Query: 646  GEVEYTACRDIDGKLISPDSTDVFMEKFQERVREEKVIKSGDSFVLKEDPSIRVIARAHK 825
            GEVEYTA  D +GK +S             ++  E V K GD FVL  D  I+V ARAHK
Sbjct: 775  GEVEYTAFVDAEGKYVSAKGALQTEGLDAVKINAEDVAKKGDGFVLAADEKIKVNARAHK 834

Query: 826  MSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIEGVHRFLGRTWRLIVG 1005
            MSKSRGNV+NPDD+V  YGADSLRLYEMFMGPLR++K W T G+EG  RFL R  RL   
Sbjct: 835  MSKSRGNVVNPDDIVDAYGADSLRLYEMFMGPLRETKVWQTKGVEGCSRFLARAHRLF-- 892

Query: 1006 QPLSDGSFRDGTVAIDDEPNFEQIRSLHKCIEKVTEEIEGTRFNTGISAMMEFVNAAYKW 1185
                     DG ++ D+  +  Q++ ++KC+ KVTEE EG RFNT I+AMMEF NAA KW
Sbjct: 893  ---------DGDIS-DESADEAQLKEINKCVAKVTEETEGMRFNTAIAAMMEFTNAATKW 942

Query: 1186 NKHPKTIIEAFVLLLSPYAPHMAEELWFRLGHSNSLAYEQFPKANPDYLKDSTIILPVQI 1365
             K P+  +  F LLLSPYAPH++EELW +LG+  S AYE +P A+   L +  + + VQ+
Sbjct: 943  EKKPRECLRPFALLLSPYAPHLSEELWTKLGNEGSNAYETWPVADESLLVEDVVTMAVQV 1002

Query: 1366 NGKTRGTIEVDKTCNEEEAIRIASADRKLSKYLVGKS-IKKRIYVPGKILNII 1521
            NGK RG IEV      E+A+ +A A   ++K++  +S IKK IYVPGKILN++
Sbjct: 1003 NGKMRGKIEVTADSTREDAMALAMAQENIAKFIGDESGIKKIIYVPGKILNVV 1055



 Score =  282 bits (721), Expect(2) = e-153
 Identities = 131/217 (60%), Positives = 164/217 (75%)
 Frame = +2

Query: 5    DESCSNFEEPYAGEGIIINSSNTAVGLNINGLLSKDAASKVIEWAGNTGHGRKKVNYKLR 184
            DE+ ++ +  Y+G G +INS+  A  L++NGL    A  KV  W    G G KKVN+KLR
Sbjct: 559  DENNTDADACYSGAGTMINSACDA--LDVNGLDDATAGEKVTAWLTANGVGEKKVNFKLR 616

Query: 185  DWLFARQRYWGEPFPVAFLDSTNEIVSLPETELPIILPELDDFTPTGTGEPPLAKAVSWV 364
            DWLFARQRYWGEPFPV + + ++  V++PE+ELP+ LP+ D+F P+G+GE PLA    WV
Sbjct: 617  DWLFARQRYWGEPFPVVYPEGSDVPVAVPESELPLTLPDTDNFKPSGSGEGPLANIEDWV 676

Query: 365  KIKDPMSGKPATRETSTMPQWAGSCWYYLRFMDPKNTEALVAKEKEMYWGPVDVYVGGAE 544
               DP+ G PA RET+TMPQWAGSCWYYLRF+DPKN  A++  + E YW PVD+YVGGAE
Sbjct: 677  ATVDPLGGGPARRETNTMPQWAGSCWYYLRFIDPKNENAMIDGDLEKYWMPVDLYVGGAE 736

Query: 545  HSVLHLLYARFWHKVLYDIGVVSTKEPFQCLINQGKL 655
            H+VLHLLYARFWHKVLYDIG VSTKEPFQ L++QG +
Sbjct: 737  HAVLHLLYARFWHKVLYDIGAVSTKEPFQRLVSQGMI 773


>ref|YP_003570999.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
            gi|294343269|emb|CBH24047.1| leucyl-tRNA synthetase
            [Salinibacter ruber M8]
          Length = 863

 Score =  295 bits (755), Expect(2) = e-152
 Identities = 148/292 (50%), Positives = 195/292 (66%)
 Frame = +1

Query: 646  GEVEYTACRDIDGKLISPDSTDVFMEKFQERVREEKVIKSGDSFVLKEDPSIRVIARAHK 825
            GE EYTA RD  G+ +S +  D   +     V +  V K GD FVL + P++RV AR+HK
Sbjct: 576  GETEYTAYRDDAGEFVSAEQVDDDADLTPVPVDDGDVEKDGDVFVLADRPAVRVDARSHK 635

Query: 826  MSKSRGNVINPDDVVSEYGADSLRLYEMFMGPLRDSKTWSTGGIEGVHRFLGRTWRLIVG 1005
            MSKSRGNVINPDDVV EYGAD+LRLYEMFMGPL   K WST  +EGVHRFL R WRL+V 
Sbjct: 636  MSKSRGNVINPDDVVDEYGADTLRLYEMFMGPLEQDKPWSTDDMEGVHRFLNRIWRLVVD 695

Query: 1006 QPLSDGSFRDGTVAIDDEPNFEQIRSLHKCIEKVTEEIEGTRFNTGISAMMEFVNAAYKW 1185
                      G    D+EP+ EQ+R+LH+ I+KVTE+IE   FNT I+AMMEFVNAA KW
Sbjct: 696  ADSG------GLAVSDEEPDREQLRTLHRTIKKVTEDIEARDFNTAIAAMMEFVNAANKW 749

Query: 1186 NKHPKTIIEAFVLLLSPYAPHMAEELWFRLGHSNSLAYEQFPKANPDYLKDSTIILPVQI 1365
            +  P+ +   FVLLLSP+APH+AEELW RLGH  SLAY  +P  + + ++   + +PVQ+
Sbjct: 750  DALPRQVATPFVLLLSPFAPHLAEELWARLGHDQSLAYADWPAYDDELIRREVVEMPVQV 809

Query: 1366 NGKTRGTIEVDKTCNEEEAIRIASADRKLSKYLVGKSIKKRIYVPGKILNII 1521
            +G  R TIEV     E + +  A     ++++L  + +++ IYVPG+I+N +
Sbjct: 810  DGTVRATIEVAADAEEADVLAAAKEAENVARHLDDEDLQREIYVPGQIVNFV 861



 Score =  271 bits (693), Expect(2) = e-152
 Identities = 127/210 (60%), Positives = 156/210 (74%)
 Frame = +2

Query: 26  EEPYAGEGIIINSSNTAVGLNINGLLSKDAASKVIEWAGNTGHGRKKVNYKLRDWLFARQ 205
           EE Y G+G  ++S+N AV LN  GL +++A   + EW      G + VNY+L+DWLF+RQ
Sbjct: 368 EEAYTGDGPHVHSANEAVSLN--GLRNEEAKEAITEWLDEEEKGERTVNYQLQDWLFSRQ 425

Query: 206 RYWGEPFPVAFLDSTNEIVSLPETELPIILPELDDFTPTGTGEPPLAKAVSWVKIKDPMS 385
           RYWGEPFP+ F +   E   +PE ELP+ LP+LD F P+GT E PLA    W +  DP +
Sbjct: 426 RYWGEPFPIVFTED-GEDKPVPEEELPVTLPDLDVFEPSGTPEGPLATIEDWRETTDPET 484

Query: 386 GKPATRETSTMPQWAGSCWYYLRFMDPKNTEALVAKEKEMYWGPVDVYVGGAEHSVLHLL 565
           G+PA RET+TMPQWAGSCWYYLRF+DP N E LV  EKE YW PVD+YVGG+EH+VLHLL
Sbjct: 485 GEPAQRETNTMPQWAGSCWYYLRFIDPDNDEQLVDPEKEEYWMPVDLYVGGSEHAVLHLL 544

Query: 566 YARFWHKVLYDIGVVSTKEPFQCLINQGKL 655
           YARFWHKVLYD GVVSTKEPFQ L++QG +
Sbjct: 545 YARFWHKVLYDAGVVSTKEPFQTLVHQGMI 574


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