BLASTX nr result

ID: Coptis23_contig00009833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009833
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524492.1| conserved hypothetical protein [Ricinus comm...   102   2e-20
gb|AAK25754.1|AF334834_1 putative chaperon P13.9 [Castanea sativa]     97   1e-18
ref|XP_003633142.1| PREDICTED: uncharacterized protein LOC100855...    90   2e-16
gb|AFW90555.1| putative chaperon P13.9 [Solanum tuberosum]             79   3e-13
ref|XP_003527184.1| PREDICTED: uncharacterized protein LOC100808...    75   4e-12

>ref|XP_002524492.1| conserved hypothetical protein [Ricinus communis]
           gi|223536280|gb|EEF37932.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/92 (55%), Positives = 68/92 (73%)
 Frame = -2

Query: 276 MANCLCFSSPVNSLISPNKPGVLIGTCNAPKVVLIDNRVFRGVQSTKSHSIVVKAGDANP 97
           M   +CF++PV S +SPN+P V++G   A KV+ + N+VF+  +S+K  S+ VKA D++ 
Sbjct: 1   MVTTICFTTPVCSFVSPNRP-VVLGDSVAGKVLRV-NKVFQSSKSSKFQSLEVKATDSDK 58

Query: 96  GAKTNSLVCAQCDGNGALACSQCDGTGVNSVD 1
           G K NS+VCA CDGNGAL CSQC GTGVNSVD
Sbjct: 59  GTKPNSIVCADCDGNGALLCSQCKGTGVNSVD 90


>gb|AAK25754.1|AF334834_1 putative chaperon P13.9 [Castanea sativa]
          Length = 131

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/92 (53%), Positives = 66/92 (71%)
 Frame = -2

Query: 276 MANCLCFSSPVNSLISPNKPGVLIGTCNAPKVVLIDNRVFRGVQSTKSHSIVVKAGDANP 97
           MAN LCF+S V S  SPNKPG++IG     KV+ + N +F+  ++ K  S+ VKA ++N 
Sbjct: 1   MANSLCFTS-VCSFKSPNKPGIVIGKSVTRKVLRV-NELFQKSETAKFQSLEVKATESNK 58

Query: 96  GAKTNSLVCAQCDGNGALACSQCDGTGVNSVD 1
           G K NS+VCA CDGNGA  C+QC+G+GVN+VD
Sbjct: 59  GTKPNSIVCADCDGNGAKLCTQCEGSGVNTVD 90


>ref|XP_003633142.1| PREDICTED: uncharacterized protein LOC100855207 [Vitis vinifera]
           gi|147777824|emb|CAN62523.1| hypothetical protein
           VITISV_033397 [Vitis vinifera]
           gi|297738950|emb|CBI28195.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = -2

Query: 276 MANCLCFSSPVNSLISPNKPGVLIGTCNAPKVVLIDNRVFRGVQSTKSHSIVVKAGDANP 97
           MAN LCFS  ++S  S +KPGV++   +A   V   N VF+   ++K  S+ VKA D+N 
Sbjct: 1   MANSLCFSPAISSK-SSHKPGVVVVGSSAAGKVFKFNNVFQHHGNSKFQSLEVKATDSNQ 59

Query: 96  GAKTNSLVCAQCDGNGALACSQCDGTGVNSVD 1
             K NS+VC+ CDGNGA+ CSQC G GVNSVD
Sbjct: 60  STKPNSIVCSNCDGNGAIQCSQCKGDGVNSVD 91


>gb|AFW90555.1| putative chaperon P13.9 [Solanum tuberosum]
          Length = 132

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -2

Query: 276 MANCLCFSSPVNSLISPNKPGVLIGT--CNAPKVVLIDNRVFRGVQSTKSHSIVVKAGDA 103
           MAN +CF+ P+ SL + NKPG++ G   C   K+ LI +  F    + +   + VKA D+
Sbjct: 1   MANSVCFT-PLASLNTFNKPGLINGNGNCAGRKIQLIKDVTFNSKSNLRV--VEVKAADS 57

Query: 102 NPGAKTNSLVCAQCDGNGALACSQCDGTGVNSVD 1
           +   K  S+VC +C+GNGA+ACSQC G GVNSVD
Sbjct: 58  DKETKVRSIVCQKCEGNGAVACSQCKGVGVNSVD 91


>ref|XP_003527184.1| PREDICTED: uncharacterized protein LOC100808293 [Glycine max]
          Length = 133

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
 Frame = -2

Query: 276 MANCLCFSSPVNSLISPNKPGVLIGTCNAPKVVLID-NRVFRGVQSTKSHSIVVKAGDAN 100
           MA+ L F+ P+ S  S + PG L  T N+     I  N      ++    S+ VKA D N
Sbjct: 1   MAHPLSFA-PICSFKSSSTPGALTVTGNSVVSAFIRINEACHDSKARNFQSLKVKAADDN 59

Query: 99  PGAKTNSLVCAQCDGNGALACSQCDGTGVNSVD 1
           P  KT S+VC+ C+GNGA+ C+QC GTGVNSVD
Sbjct: 60  PSTKTKSIVCSDCEGNGAILCTQCKGTGVNSVD 92


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