BLASTX nr result

ID: Coptis23_contig00009819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009819
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like...   555   e-155
ref|XP_002517082.1| serine-threonine protein kinase, plant-type,...   507   e-141
ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like...   506   e-141
gb|ACU18125.1| unknown [Glycine max]                                  497   e-138
ref|XP_003556064.1| PREDICTED: leucine-rich repeat extensin-like...   496   e-138

>ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Vitis
            vinifera]
          Length = 394

 Score =  555 bits (1430), Expect = e-155
 Identities = 265/362 (73%), Positives = 305/362 (84%), Gaps = 7/362 (1%)
 Frame = +3

Query: 36   KMMNLHLSLGLLFV----LIFPSSSQQASLD---LPNPRLLKAFDALQAWKHVIVSDPKK 194
            KM N ++S  L  +    L F + S Q S     LPNPR+L A+ ALQAWKHVI+SDPK 
Sbjct: 4    KMKNPYMSSALWIIFSLFLSFSAPSHQDSYSPPPLPNPRILNAYTALQAWKHVILSDPKN 63

Query: 195  FTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHIN 374
            FTSNW G DVCNY GVYCAPAPDD HITTVAGIDLNH +I GSLPEELGLLTDLA+FHIN
Sbjct: 64   FTSNWCGFDVCNYKGVYCAPAPDDPHITTVAGIDLNHADIAGSLPEELGLLTDLALFHIN 123

Query: 375  SNRFCGTIPKSFQNLRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKL 554
            SNRFCGT+P SF++LRLLYELD+SNN F GQFP VVLCL SLKFLDIRYN+F+GD+P  L
Sbjct: 124  SNRFCGTLPDSFRHLRLLYELDISNNRFKGQFPSVVLCLPSLKFLDIRYNEFEGDIPTGL 183

Query: 555  FDMKLDALFINNNKFRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMN 734
            FD+KLDA+F+NNNKF+ SLP NIGNSPVSV+V ANN+L+GC PSSL+++  TLNE+I+ N
Sbjct: 184  FDLKLDAIFVNNNKFKSSLPGNIGNSPVSVIVFANNNLNGCLPSSLSKMAKTLNELIITN 243

Query: 735  SGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPASIC 914
            +G+ GCL PEIGLLKN+TVFDVS N+LVG LPET+G MKSLEQLNVA NKLSGEIP +IC
Sbjct: 244  AGLKGCLSPEIGLLKNVTVFDVSSNELVGPLPETIGEMKSLEQLNVAHNKLSGEIPETIC 303

Query: 915  SLPNLENFTYSNNYFCGEPQSCLKLPDQEDKKNCIPDRPLQRSAEECASFLSHPVDCNAF 1094
            SLPNLENFTYS NYFCGEP +CLKLP  +D+KNCIPDRP+QRS EECA+FL+ PVDC AF
Sbjct: 304  SLPNLENFTYSYNYFCGEPPTCLKLPANDDQKNCIPDRPMQRSPEECAAFLAQPVDCGAF 363

Query: 1095 GC 1100
            GC
Sbjct: 364  GC 365


>ref|XP_002517082.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223543717|gb|EEF45245.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 356

 Score =  507 bits (1306), Expect = e-141
 Identities = 245/354 (69%), Positives = 288/354 (81%), Gaps = 8/354 (2%)
 Frame = +3

Query: 39   MMNLHLSLGLLFVL--IFPSSSQQASLD------LPNPRLLKAFDALQAWKHVIVSDPKK 194
            M N +L++ LL +L   F   S QAS        +P+PRLLKA+ ALQAWKH I SDPK 
Sbjct: 1    MKNPYLTIALLGILTVFFSKPSYQASYSSSPPPPIPSPRLLKAYIALQAWKHAITSDPKN 60

Query: 195  FTSNWYGLDVCNYNGVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHIN 374
            FTSNWYG DVC+Y GVYCAPA DD H  TVAGIDLNH NI GSLPE+LGLLTDLA+FH+N
Sbjct: 61   FTSNWYGPDVCSYTGVYCAPALDDPHTITVAGIDLNHANIAGSLPEDLGLLTDLALFHLN 120

Query: 375  SNRFCGTIPKSFQNLRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKL 554
            SNRFCGTIP SF++LRLLYE D+SNN F+G+ P V+LCL+SLKFLD+RYN+F G+VP+KL
Sbjct: 121  SNRFCGTIPDSFRHLRLLYEFDISNNQFSGELPPVLLCLTSLKFLDVRYNEFYGNVPSKL 180

Query: 555  FDMKLDALFINNNKFRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMN 734
            FD+KLDALFINNNKF+ SLP N GNSPVSV+VLANND+SGC PSSL ++G TL +IIL N
Sbjct: 181  FDLKLDALFINNNKFKSSLPENFGNSPVSVIVLANNDISGCIPSSLTKMGRTLKQIILTN 240

Query: 735  SGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPASIC 914
             G+ GC+  +IGLL  +TVFDVS NKLVGSLP++MG MKSLEQLNVA NKLSG IP SIC
Sbjct: 241  MGLNGCIQSDIGLLNQVTVFDVSFNKLVGSLPDSMGEMKSLEQLNVAHNKLSGNIPESIC 300

Query: 915  SLPNLENFTYSNNYFCGEPQSCLKLPDQEDKKNCIPDRPLQRSAEECASFLSHP 1076
             LP LENFTYS+NYFCGEP  CLKL  ++D++NCIP RPLQRS EEC +F ++P
Sbjct: 301  LLPRLENFTYSDNYFCGEPPVCLKLQAKDDRRNCIPHRPLQRSPEECKAFYAYP 354


>ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Cucumis
            sativus] gi|449518721|ref|XP_004166385.1| PREDICTED:
            leucine-rich repeat extensin-like protein 6-like [Cucumis
            sativus]
          Length = 376

 Score =  506 bits (1304), Expect = e-141
 Identities = 241/348 (69%), Positives = 280/348 (80%), Gaps = 4/348 (1%)
 Frame = +3

Query: 69   LFVLIFPSSSQQASLD----LPNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGLDVCNYN 236
            +F L+F  S QQ        LPNPRLLKA+ ALQAWKH I  DP  FT+NWYG DVCNY+
Sbjct: 17   IFTLLFQPSHQQTPSPPPPFLPNPRLLKAYTALQAWKHAITEDPSNFTANWYGPDVCNYS 76

Query: 237  GVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGTIPKSFQN 416
            GV+CAPA DD  I TVAGIDLNHGNI G+LP++LGLLTDLA+FHINSNRFCGTIP SF+ 
Sbjct: 77   GVFCAPALDDPDIRTVAGIDLNHGNISGTLPDDLGLLTDLALFHINSNRFCGTIPNSFRC 136

Query: 417  LRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFINNNK 596
            L LL+ELD+SNN F+G+FP V+L L +LKFLDIR+N F GDVP+ LF++KLDALFINNN 
Sbjct: 137  LTLLFELDISNNDFSGEFPSVILSLPALKFLDIRFNKFSGDVPSSLFELKLDALFINNND 196

Query: 597  FRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLL 776
            F FSLP NIGNSPVSVLV ANN+++GC PSS++ +  TLNEII+  SG+ GCLP EIG L
Sbjct: 197  FNFSLPENIGNSPVSVLVFANNNINGCLPSSISNMNTTLNEIIITGSGLIGCLPSEIGSL 256

Query: 777  KNLTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPASICSLPNLENFTYSNNY 956
             NLTVFDVS N LVG LPETM  MK LEQLNVA N+LSGEIPASICSLP L+NFT+S N+
Sbjct: 257  SNLTVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTFSYNF 316

Query: 957  FCGEPQSCLKLPDQEDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1100
            FC EP  CLKL   +D+KNC+PDRP QRS EEC +F S+PVDC+ FGC
Sbjct: 317  FCSEPPVCLKLQASDDQKNCLPDRPFQRSPEECKAFYSNPVDCSVFGC 364


>gb|ACU18125.1| unknown [Glycine max]
          Length = 390

 Score =  497 bits (1280), Expect = e-138
 Identities = 240/355 (67%), Positives = 284/355 (80%), Gaps = 2/355 (0%)
 Frame = +3

Query: 42   MNLHLSLGLLFVLIFPSSSQQASLDLP--NPRLLKAFDALQAWKHVIVSDPKKFTSNWYG 215
            +N+ L L +L  +I PS  Q  S  LP  NPRL KA+ ALQAWKH I SDPK FT NW G
Sbjct: 14   LNIVLFLTILISIINPSH-QDPSSPLPPINPRLTKAYTALQAWKHKITSDPKNFTLNWCG 72

Query: 216  LDVCNYNGVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGT 395
             +VCNY G+YCAPA DD HI TVAG+DLNH  I GSLPEELGLLTDL++ HINSNRFCG+
Sbjct: 73   PNVCNYTGIYCAPALDDPHIYTVAGVDLNHATISGSLPEELGLLTDLSLLHINSNRFCGS 132

Query: 396  IPKSFQNLRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDA 575
            +P SF  L LL+ELD+SNN F+G FPEVVLC+ +LK+LDIR+N+F G+VP++LFD+KLDA
Sbjct: 133  LPTSFDKLHLLHELDISNNQFSGPFPEVVLCIPNLKYLDIRFNNFHGNVPSRLFDVKLDA 192

Query: 576  LFINNNKFRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCL 755
            LFINNN F+FSLP+N GNS  SV+V ANNDL GC PSSL ++  TLNEII+ NSG+TGCL
Sbjct: 193  LFINNNNFQFSLPNNFGNSTASVVVFANNDLKGCLPSSLVKMKGTLNEIIITNSGLTGCL 252

Query: 756  PPEIGLLKNLTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPASICSLPNLEN 935
            P EIG L  +TVFDVS NKLVG LPE++G MK LEQLNVA+N+LSGEIP S+C LP LEN
Sbjct: 253  PSEIGDLDMVTVFDVSFNKLVGELPESLGRMKKLEQLNVANNELSGEIPESVCMLPRLEN 312

Query: 936  FTYSNNYFCGEPQSCLKLPDQEDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1100
            FTYS NYFC E  +CLKL D++D KNCIP RPLQRS +EC +F +HPV C+AFGC
Sbjct: 313  FTYSYNYFCSESPTCLKLKDKDDTKNCIPYRPLQRSLDECKAFYAHPVHCSAFGC 367


>ref|XP_003556064.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Glycine
            max]
          Length = 399

 Score =  496 bits (1276), Expect = e-138
 Identities = 239/355 (67%), Positives = 282/355 (79%), Gaps = 2/355 (0%)
 Frame = +3

Query: 42   MNLHLSLGLLFVLIFPSSSQQASLDLP--NPRLLKAFDALQAWKHVIVSDPKKFTSNWYG 215
            +N+ L L  L  +I PS  Q  S  LP  NPRL KA+ ALQAWK+ I SDPK FT NW G
Sbjct: 13   LNIVLFLAFLISIINPSQ-QDPSSPLPPLNPRLTKAYTALQAWKYKITSDPKNFTLNWCG 71

Query: 216  LDVCNYNGVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGT 395
             +VCNY G+YCAPA DD HI TVAG+DLNH  I GSLPEELGLLTDL++FHINSNRFCG+
Sbjct: 72   PNVCNYTGIYCAPALDDPHIYTVAGVDLNHATISGSLPEELGLLTDLSLFHINSNRFCGS 131

Query: 396  IPKSFQNLRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDA 575
            +P SF  L LL+ELD+SNN F+G FPEVVLC+ +LK+LDIR+N+F G+VP++LFD+KLDA
Sbjct: 132  LPNSFDKLHLLHELDISNNQFSGPFPEVVLCIPNLKYLDIRFNNFHGNVPSRLFDVKLDA 191

Query: 576  LFINNNKFRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCL 755
            LFINNN F+FSLP N+GNSPVSV+V ANNDL GC P SL ++  TLNEII+ NSG+TGCL
Sbjct: 192  LFINNNNFQFSLPENLGNSPVSVVVFANNDLKGCLPLSLVKMKGTLNEIIITNSGLTGCL 251

Query: 756  PPEIGLLKNLTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPASICSLPNLEN 935
            P EIG L  +TVFDVS NKLVG LPE++G MK LEQLNVA N LSGEIP S+C LP LEN
Sbjct: 252  PSEIGDLDKVTVFDVSFNKLVGELPESLGRMKRLEQLNVAHNMLSGEIPESVCMLPRLEN 311

Query: 936  FTYSNNYFCGEPQSCLKLPDQEDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1100
            FTYS NYFC E   CLKL +++D KNCIP RPLQ+S +EC +F +HPV C+AFGC
Sbjct: 312  FTYSYNYFCSESPVCLKLKEKDDTKNCIPYRPLQKSPDECKAFYAHPVHCSAFGC 366


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