BLASTX nr result

ID: Coptis23_contig00009818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009818
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609353.1| YABBY protein [Medicago truncatula] gi|35551...   110   1e-22
gb|ACJ85113.1| unknown [Medicago truncatula] gi|388490620|gb|AFK...   110   1e-22
ref|XP_003542627.1| PREDICTED: axial regulator YABBY 5-like [Gly...   109   2e-22
gb|ACU19358.1| unknown [Glycine max]                                  109   2e-22
ref|NP_001238347.1| uncharacterized protein LOC100499942 [Glycin...   109   2e-22

>ref|XP_003609353.1| YABBY protein [Medicago truncatula] gi|355510408|gb|AES91550.1|
           YABBY protein [Medicago truncatula]
          Length = 191

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/61 (83%), Positives = 56/61 (91%), Gaps = 2/61 (3%)
 Frame = -1

Query: 179 MSSCSTDVS--ASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAAL 6
           MSSCS DV+  A+EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA 
Sbjct: 1   MSSCSIDVAPAAAEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAF 60

Query: 5   Q 3
           Q
Sbjct: 61  Q 61


>gb|ACJ85113.1| unknown [Medicago truncatula] gi|388490620|gb|AFK33376.1| unknown
           [Medicago truncatula]
          Length = 191

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/61 (83%), Positives = 56/61 (91%), Gaps = 2/61 (3%)
 Frame = -1

Query: 179 MSSCSTDVS--ASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAAL 6
           MSSCS DV+  A+EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA 
Sbjct: 1   MSSCSIDVAPAAAEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAF 60

Query: 5   Q 3
           Q
Sbjct: 61  Q 61


>ref|XP_003542627.1| PREDICTED: axial regulator YABBY 5-like [Glycine max]
          Length = 186

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = -1

Query: 179 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQ 3
           MSSCS DV A EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA Q
Sbjct: 1   MSSCSIDV-APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQ 58


>gb|ACU19358.1| unknown [Glycine max]
          Length = 186

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = -1

Query: 179 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQ 3
           MSSCS DV A EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA Q
Sbjct: 1   MSSCSIDV-APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQ 58


>ref|NP_001238347.1| uncharacterized protein LOC100499942 [Glycine max]
           gi|255627893|gb|ACU14291.1| unknown [Glycine max]
          Length = 186

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/59 (86%), Positives = 54/59 (91%)
 Frame = -1

Query: 179 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQ 3
           MSSCS DV A EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA Q
Sbjct: 1   MSSCSIDV-APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQ 58


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