BLASTX nr result

ID: Coptis23_contig00009810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009810
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265485.1| PREDICTED: uncharacterized protein LOC100255...   167   4e-39
ref|XP_002511675.1| Auxin-induced protein X10A, putative [Ricinu...   166   8e-39
ref|XP_002301272.1| SAUR family protein [Populus trichocarpa] gi...   158   3e-36
ref|XP_002320048.1| SAUR family protein [Populus trichocarpa] gi...   155   2e-35
ref|XP_003517959.1| PREDICTED: uncharacterized protein LOC100783...   154   5e-35

>ref|XP_002265485.1| PREDICTED: uncharacterized protein LOC100255700 [Vitis vinifera]
           gi|297741147|emb|CBI31878.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  167 bits (424), Expect = 4e-39
 Identities = 91/166 (54%), Positives = 109/166 (65%)
 Frame = -1

Query: 670 MRRNRGFKLGRKFVRVFKWVFTSKRRRSCNGYKRLVDXXXXXXXXXXXXKIYNWGRSLKQ 491
           MR+ +GF+LGRK V VF+WVF  +R +S    K L              KI NWGR L  
Sbjct: 1   MRKTKGFRLGRKLVTVFRWVF--RRNQSPRVIKSL---DHRSCRSRAMTKICNWGRRLLM 55

Query: 490 GAKGLCCPRTATCSDYSRMGREEFDHPKPIEVPKGHLAVYVGSKDDDPHRVLVPIIYFNH 311
            AKGLC P+    S Y R+G E  +  KP+EVPKGHLAVYVG   D  HRVLVP++YFNH
Sbjct: 56  KAKGLCFPK----SGYVRVGHEPCE-TKPMEVPKGHLAVYVGDSGDHTHRVLVPVLYFNH 110

Query: 310 PLFGQLLQEAEKEFGYNHSGGIKIPCPISEFERVKTSIAAGRKSMR 173
           PLFG+LL+ AEK +G+NH GGI IPCPI+EFE+VKT I AG    R
Sbjct: 111 PLFGELLRNAEKVYGFNHPGGITIPCPITEFEKVKTRIDAGEHFRR 156


>ref|XP_002511675.1| Auxin-induced protein X10A, putative [Ricinus communis]
           gi|223548855|gb|EEF50344.1| Auxin-induced protein X10A,
           putative [Ricinus communis]
          Length = 168

 Score =  166 bits (421), Expect = 8e-39
 Identities = 86/161 (53%), Positives = 108/161 (67%)
 Frame = -1

Query: 670 MRRNRGFKLGRKFVRVFKWVFTSKRRRSCNGYKRLVDXXXXXXXXXXXXKIYNWGRSLKQ 491
           M + +GFK+G++ VR+ +W+F  +R R+   Y RL               I NWGR L +
Sbjct: 1   MMKFKGFKIGKRLVRISRWIF--RRTRNNPRYDRLCSSGPTCRLKPLTKLI-NWGRRLTK 57

Query: 490 GAKGLCCPRTATCSDYSRMGREEFDHPKPIEVPKGHLAVYVGSKDDDPHRVLVPIIYFNH 311
           GAK LC  +    S Y+ +G E   H KP+ VPKGHLAVYVG KD D HRVLVP+IYFNH
Sbjct: 58  GAKSLCSAKPG--SGYTHIGEEPI-HEKPVTVPKGHLAVYVGQKDGDFHRVLVPVIYFNH 114

Query: 310 PLFGQLLQEAEKEFGYNHSGGIKIPCPISEFERVKTSIAAG 188
           PLFG+LL+EAE+E+G+N  GGI IPC  SEFERV+T IAAG
Sbjct: 115 PLFGELLREAEREYGFNQQGGITIPCRYSEFERVQTRIAAG 155


>ref|XP_002301272.1| SAUR family protein [Populus trichocarpa]
           gi|222842998|gb|EEE80545.1| SAUR family protein [Populus
           trichocarpa]
          Length = 171

 Score =  158 bits (399), Expect = 3e-36
 Identities = 84/163 (51%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
 Frame = -1

Query: 670 MRRNRGFKLGRKFVRVFKWVFTSKRRR--SCNGYKRLVDXXXXXXXXXXXXKIYNWGRSL 497
           MR+NRGFK+G++FVR+  W+F+  R     CN                   KI NWGR L
Sbjct: 1   MRKNRGFKIGKRFVRISTWIFSRTRIHPPGCNSIGP--SESTCSSKSKSLSKIINWGRRL 58

Query: 496 KQGAKGLCCPRTATCSDYSRMGREEFDHPKPIEVPKGHLAVYVGSKDDDPHRVLVPIIYF 317
            +GAK +C  +    S Y  +G E     KP+ VPKGHLAVYVG KD + HRVLVP+IYF
Sbjct: 59  TKGAKSICSAKPR--SGYIPVGHEPVCD-KPVPVPKGHLAVYVGQKDGEFHRVLVPLIYF 115

Query: 316 NHPLFGQLLQEAEKEFGYNHSGGIKIPCPISEFERVKTSIAAG 188
           NHPLFG+LL+EAE+E+G+N  GGI IPC  SEFERV+T I +G
Sbjct: 116 NHPLFGELLREAEEEYGFNQQGGITIPCRFSEFERVQTRIKSG 158


>ref|XP_002320048.1| SAUR family protein [Populus trichocarpa]
           gi|222860821|gb|EEE98363.1| SAUR family protein [Populus
           trichocarpa]
          Length = 170

 Score =  155 bits (392), Expect = 2e-35
 Identities = 88/173 (50%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
 Frame = -1

Query: 670 MRRNRGFKLGRKFVRVFKWVFTSKRRRSCNGYKRL-VDXXXXXXXXXXXXKIYNWGRSLK 494
           MR+ RGFK+G++ VR+  W+F   R     GY  L               KI NWGR L 
Sbjct: 1   MRKIRGFKIGKRLVRISTWIFRRTRIHP-PGYNLLGQSESTCRSKPKSISKIINWGRRLT 59

Query: 493 QGAKGLCCPRTATCSDYSRMGREEFDHPKPIEVPKGHLAVYVGSKDDDPHRVLVPIIYFN 314
           +GAK LC  +    S Y  MG E     KP+ VPKGHLAVYVG KD D HRVLVP+IYFN
Sbjct: 60  KGAKSLCGAKPG--SGYIPMGHE-LVCDKPVTVPKGHLAVYVGQKDGDFHRVLVPVIYFN 116

Query: 313 HPLFGQLLQEAEKEFGYNHSGGIKIPCPISEFERVKTSIAA---GRKSMRSNH 164
           HPLFG+LL+EAE+E+G+N  GGI IPC  SEFE V+T I A   G+ + + NH
Sbjct: 117 HPLFGELLREAEEEYGFNQQGGITIPCRFSEFESVQTRIKAGSGGKPTWKRNH 169


>ref|XP_003517959.1| PREDICTED: uncharacterized protein LOC100783436 [Glycine max]
          Length = 162

 Score =  154 bits (388), Expect = 5e-35
 Identities = 82/163 (50%), Positives = 105/163 (64%)
 Frame = -1

Query: 670 MRRNRGFKLGRKFVRVFKWVFTSKRRRSCNGYKRLVDXXXXXXXXXXXXKIYNWGRSLKQ 491
           M +NRGF L R+ +RV KW+F   R R+   Y  L D             +  WGR L  
Sbjct: 1   MSKNRGFNLRRRLIRVSKWIFRKIRTRAPREYHCLGDSPPSPMVK-----LLTWGRKLTA 55

Query: 490 GAKGLCCPRTATCSDYSRMGREEFDHPKPIEVPKGHLAVYVGSKDDDPHRVLVPIIYFNH 311
           GAK     + A+ S Y+++G +    P P  VPKGHLAVYVG KD + HRVLVP+IYFNH
Sbjct: 56  GAKSRL--KVASGSGYAQLGTD----PDP-SVPKGHLAVYVGQKDGELHRVLVPVIYFNH 108

Query: 310 PLFGQLLQEAEKEFGYNHSGGIKIPCPISEFERVKTSIAAGRK 182
           PLFG+LL++AE+EFG++H GGI IPC  +EFERVKT IA+G +
Sbjct: 109 PLFGELLKQAEEEFGFHHEGGITIPCRFTEFERVKTRIASGSR 151


Top