BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009804
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subun...   544   e-152
ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subun...   528   e-147
ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subun...   527   e-147
ref|XP_002528507.1| spliceosome associated protein, putative [Ri...   525   e-146
ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subun...   524   e-146

>ref|XP_002278479.1| PREDICTED: probable splicing factor 3A subunit 1-like [Vitis
            vinifera]
          Length = 814

 Score =  544 bits (1402), Expect = e-152
 Identities = 311/514 (60%), Positives = 360/514 (70%), Gaps = 9/514 (1%)
 Frame = +2

Query: 2    HAYYQHRLTELRSE---VVHPSPSHPEESAVSASASCT--TDGNETVADVDATLAAPSAR 166
            HAYYQHRL+E RS+        PS P +S+   SA      D +ETV   D     PSA+
Sbjct: 109  HAYYQHRLSEFRSQNQSSAQQPPSQPADSSAPESAPSAPHADNSETVVKPD-----PSAQ 163

Query: 167  FGLVRRALEPPECEQYTVWHPEGITGEELDIIKLTAQFVARNGKSFLTGLASREINKPHF 346
            F  VR+ LEPPE EQYTV  PEGITGEELDIIKLTAQFVARNGKSFLTGL SREIN P F
Sbjct: 164  FKPVRKVLEPPETEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQF 223

Query: 347  QFLKPTNSKYLPFTKYSDAYSKVLMPPMGLIDKLR-SVADLATVLEHCLHRLDWERCQEQ 523
             FLKPT+S ++ FT  +DAYSKVLMPP GL +KLR SV D+ TVLE CLHRL+WER QEQ
Sbjct: 224  HFLKPTHSMFMFFTALADAYSKVLMPPKGLTEKLRKSVTDMTTVLERCLHRLEWERSQEQ 283

Query: 524  DKQKAEVEIQQERVQTALIDWHDFSVVETIEFTDDEDAELPPSMTLAEVMSWSNISAMED 703
             +QKAE EI+QER+Q A+IDWHDF VVETI+F DDED +LPP MTL EV+  S ISA E+
Sbjct: 284  ARQKAEDEIEQERMQMAMIDWHDFVVVETIDFADDEDEDLPPPMTLDEVIRRSKISAAEE 343

Query: 704  QPEVVEHGNEADMXXXXXXXXXXXXGMKAACLEETVWNMSERKAA-APGQPEPPMRIVKS 880
            + E +E G E +M            GM+AA LEE   N  ERK A    + EPPMRIVK+
Sbjct: 344  E-EFIEPGKEVEMEMDEEEVQLVEEGMRAASLEE---NDDERKEAKTTEEQEPPMRIVKN 399

Query: 881  WKRPEDRISAQRNPTKFVVSPITGELIPINEMAEHMRISLIDPKFKEQKDRTMAKIRKTT 1060
            WKRPEDRI A+R+PTKF VSPITGELIPINEM+EHMRISLIDPK+KEQK+R  AKIR+TT
Sbjct: 400  WKRPEDRIPAERDPTKFGVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETT 459

Query: 1061 LAHDDEMVSNIVGLARTRPDIFGTTEEEVSNAVKEVIEKKKDEHPTQVIWNGRTVSTRIT 1240
            LA DDE+  NIVGLARTRPDIFGTTEEEVSNAVK  IEKKK++ P QVIW+G T S   T
Sbjct: 460  LAQDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRT 519

Query: 1241 ANQAMSRNVSEEEHTDAANSKTRTIPWVSA--PPRPDLASVHXXXXXXXXSAFMNLTHRP 1414
            ANQAM++N++ E+  DAAN+  RT+P  +A  PPRP + SV         +  +NL   P
Sbjct: 520  ANQAMTQNLNGEDLNDAANNDARTLPGPAAPPPPRPGVPSVRPLPPPPGLA--LNLPRVP 577

Query: 1415 LPTSPGSHFTRLGGSRSFTPLLIPPHVFVIPPRP 1516
              T   S  T  G       LL PP     PPRP
Sbjct: 578  PNTVQYSAPTNSG-------LLAPP-----PPRP 599


>ref|XP_003534698.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 806

 Score =  528 bits (1361), Expect = e-147
 Identities = 291/512 (56%), Positives = 358/512 (69%), Gaps = 5/512 (0%)
 Frame = +2

Query: 2    HAYYQHRLTELRSEVVHPSPSHPEESAVSASASCTTDGNETVADVDATLAAP--SARFGL 175
            HAYYQHRL+E R++        P +SA +   S  +D N  VA   A    P  SA+F  
Sbjct: 108  HAYYQHRLSEFRAQNQSSGQQQPADSA-AVPESVPSDSNGVVAAAAAAAEKPDFSAQFKP 166

Query: 176  VRRALEPPECEQYTVWHPEGITGEELDIIKLTAQFVARNGKSFLTGLASREINKPHFQFL 355
            VR+ LEPPE EQYTV  PEGITGEELDIIKLTAQFVARNGKSFLTGL SRE+N P F FL
Sbjct: 167  VRKVLEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFHFL 226

Query: 356  KPTNSKYLPFTKYSDAYSKVLMPPMGLIDKLR-SVADLATVLEHCLHRLDWERCQEQDKQ 532
            KPT+S +  FT  +DAYSKVLMPP GL++KL+ SV+D+ TVLE C++RL+W+R QEQ +Q
Sbjct: 227  KPTHSMFTFFTSLADAYSKVLMPPKGLMEKLKNSVSDMTTVLERCVNRLEWDRSQEQARQ 286

Query: 533  KAEVEIQQERVQTALIDWHDFSVVETIEFTDDEDAELPPSMTLAEVMSWSNISAMEDQPE 712
            KAE EI+QER+Q A+IDWHDF VVETI+F DDED ELPP MT+ EV+  S ++AME++ +
Sbjct: 287  KAEDEIEQERIQMAMIDWHDFVVVETIDFADDEDQELPPPMTIEEVIRRSKVTAMEEE-D 345

Query: 713  VVEHGNEADMXXXXXXXXXXXXGMKAACLEETVWNMSERKAAAPGQPEPPMRIVKSWKRP 892
            +VE G E +M            GM+AA LE+   +  + +      PEPPMRIVK+WKRP
Sbjct: 346  IVEPGKEVEMEMDEEEAQLVEEGMRAASLEDRD-DRKQNEVRVTEDPEPPMRIVKNWKRP 404

Query: 893  EDRISAQRNPTKFVVSPITGELIPINEMAEHMRISLIDPKFKEQKDRTMAKIRKTTLAHD 1072
            E+RISA+R+ TKFVVSPITGELIPI+EM+EHMRISLIDPK+KEQK+R  AKIR+TTLA D
Sbjct: 405  EERISAERDSTKFVVSPITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAAD 464

Query: 1073 DEMVSNIVGLARTRPDIFGTTEEEVSNAVKEVIEKKKDEHPTQVIWNGRTVSTRITANQA 1252
            DE+  NIVGLARTRPDIFGTTEEEVSNAVK  IEK  DE P QVIW+G T S   TANQA
Sbjct: 465  DEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKINDEQPKQVIWDGHTGSIGRTANQA 524

Query: 1253 MSRNVSEEEHTDAANSKTRTIPWVSA-PPRPDLASVHXXXXXXXXSAFMNLTHRPLP-TS 1426
            MS+N+  E+  DA+N++ R     +A PPRP + SV         +  +NL   P+  ++
Sbjct: 525  MSQNIGNEDQNDASNNEARNFLGPAAPPPRPGMPSVRPLPPPPGLA--LNLPRVPVQYSA 582

Query: 1427 PGSHFTRLGGSRSFTPLLIPPHVFVIPPRPLP 1522
            P S    +   R   P + P      PP P+P
Sbjct: 583  PHSGALPMPPPRPMMPSIRP-----APPPPMP 609


>ref|XP_003546472.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 802

 Score =  527 bits (1357), Expect = e-147
 Identities = 291/512 (56%), Positives = 356/512 (69%), Gaps = 5/512 (0%)
 Frame = +2

Query: 2    HAYYQHRLTELRSEVVHPSPSHPEESAVSASASCTTDGNETVADVDATLAAP--SARFGL 175
            HAYYQHRL+E R++        P +SA +   S  +D N  VA   A    P  SA+F  
Sbjct: 105  HAYYQHRLSEFRAQNQSSGQQQPADSA-AVPESVPSDSNGVVAAAAAAAEKPDFSAQFKP 163

Query: 176  VRRALEPPECEQYTVWHPEGITGEELDIIKLTAQFVARNGKSFLTGLASREINKPHFQFL 355
            VR+ LEPPE EQYTV  PEGITGEELDIIKLTAQFVARNGKSFLTGL SRE+N P F FL
Sbjct: 164  VRKVLEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFHFL 223

Query: 356  KPTNSKYLPFTKYSDAYSKVLMPPMGLIDKLR-SVADLATVLEHCLHRLDWERCQEQDKQ 532
            KPT+S +  FT  +DAYSKVLMPP GL +KL+ SV+D+ TVLE C++RL+WER QEQ +Q
Sbjct: 224  KPTHSMFTFFTSLADAYSKVLMPPKGLTEKLKKSVSDMTTVLERCVNRLEWERSQEQARQ 283

Query: 533  KAEVEIQQERVQTALIDWHDFSVVETIEFTDDEDAELPPSMTLAEVMSWSNISAMEDQPE 712
            KAE EI+QER+Q A+IDWHDF VVETI+F DDED ELPP MT+ EV+  S ++AME+  +
Sbjct: 284  KAEDEIEQERIQMAMIDWHDFVVVETIDFADDEDQELPPPMTIEEVIRRSKVTAMEE--D 341

Query: 713  VVEHGNEADMXXXXXXXXXXXXGMKAACLEETVWNMSERKAAAPGQPEPPMRIVKSWKRP 892
            +VE G E +M            GM+AA LE+   +  + +      PEPPMRIVK+WKRP
Sbjct: 342  IVEPGKEVEMEMDEEEAQLVEEGMRAASLEDHD-DRKQNEVRVTEDPEPPMRIVKNWKRP 400

Query: 893  EDRISAQRNPTKFVVSPITGELIPINEMAEHMRISLIDPKFKEQKDRTMAKIRKTTLAHD 1072
            E+RIS +R+ TKFVVSPITGELIPI+EM+EHMRISLIDPK+KEQK+R  AKIR+TTLA D
Sbjct: 401  EERISVERDSTKFVVSPITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAAD 460

Query: 1073 DEMVSNIVGLARTRPDIFGTTEEEVSNAVKEVIEKKKDEHPTQVIWNGRTVSTRITANQA 1252
            DE+  NIVGLARTRPDIFGTTEEEVSNAVK  IEK  DE P QVIW+G T S   TANQA
Sbjct: 461  DEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKINDEQPKQVIWDGHTGSIGRTANQA 520

Query: 1253 MSRNVSEEEHTDAANSKTRTIPWVSA-PPRPDLASVHXXXXXXXXSAFMNLTHRPLP-TS 1426
            MS+N+  E+  DA+N++ R +   +A PPRP + SV         +  +NL   P+  ++
Sbjct: 521  MSQNIGNEDQNDASNNEARNLLGPAAPPPRPGMPSVRPLPPPPGLA--LNLPRVPIQYSA 578

Query: 1427 PGSHFTRLGGSRSFTPLLIPPHVFVIPPRPLP 1522
            P S    +   R   P + P      PP P+P
Sbjct: 579  PHSGALPMPPPRPMMPSIRP-----APPPPMP 605


>ref|XP_002528507.1| spliceosome associated protein, putative [Ricinus communis]
            gi|223532067|gb|EEF33876.1| spliceosome associated
            protein, putative [Ricinus communis]
          Length = 816

 Score =  525 bits (1352), Expect = e-146
 Identities = 289/486 (59%), Positives = 346/486 (71%), Gaps = 9/486 (1%)
 Frame = +2

Query: 2    HAYYQHRLTELRSEVVHP-----SPSHPEESAVSA-SASCTTDGNETVADVDATLAAPSA 163
            HAYYQHRL+E R++ +       S +  + +A SA SA    DG++  A   A     +A
Sbjct: 108  HAYYQHRLSEFRAQNLSSAQQGLSQNDDKAAAESAQSAPAAADGSDAAAVPVAPKPDTAA 167

Query: 164  RFGLVRRALEPPECEQYTVWHPEGITGEELDIIKLTAQFVARNGKSFLTGLASREINKPH 343
            +F L R+ LEPPE EQYTV  PEGITGEELDIIKLTAQFVARNG++FLTGL +RE+N P 
Sbjct: 168  QFRLPRKVLEPPEDEQYTVSLPEGITGEELDIIKLTAQFVARNGQAFLTGLTNREMNNPQ 227

Query: 344  FQFLKPTNSKYLPFTKYSDAYSKVLMPPMGLIDKL-RSVADLATVLEHCLHRLDWERCQE 520
            F FLKPT+S Y  FT  +D+YS+VLMPP GL +KL +SV D+ TVLE CLHRL+WER QE
Sbjct: 228  FHFLKPTHSMYKFFTLLADSYSRVLMPPKGLTEKLIKSVVDMTTVLERCLHRLEWERSQE 287

Query: 521  QDKQKAEVEIQQERVQTALIDWHDFSVVETIEFTDDEDAELPPSMTLAEVMSWSNISAME 700
            Q +QKAE EI+QER+Q A+IDWH+F VVETI+F DDED +LPP MTL EV+  S I+ M 
Sbjct: 288  QARQKAEDEIEQERIQMAMIDWHEFVVVETIDFADDEDEDLPPPMTLEEVVRRSKITTMT 347

Query: 701  DQPEVVEHGNEADMXXXXXXXXXXXXGMKAACLEETVWNMSERKAAAPGQPEPPMRIVKS 880
            +  E+VE G E +M            GM+AA LEE   N SER      +PE PMRIVK+
Sbjct: 348  ED-EIVEPGKEVEMEMDEEEVQLVEEGMRAASLEE---NDSERDRKMNEEPEEPMRIVKN 403

Query: 881  WKRPEDRISAQRNPTKFVVSPITGELIPINEMAEHMRISLIDPKFKEQKDRTMAKIRKTT 1060
            WKRPE+RI A+R+PTK V+SPITGELIPINEM+EHMRISLIDPK+KEQK+R  AKIR+TT
Sbjct: 404  WKRPEERIPAERDPTKVVISPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETT 463

Query: 1061 LAHDDEMVSNIVGLARTRPDIFGTTEEEVSNAVKEVIEKKKDEHPTQVIWNGRTVSTRIT 1240
            LA DDE+  NIVGLARTRPDIFGTTEEEVSNAVK  IEKKKDE P QVIW+G T S   T
Sbjct: 464  LAQDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRT 523

Query: 1241 ANQAMSRNVSEEEHTDAANSKTRTIPWVSAPP--RPDLASVHXXXXXXXXSAFMNLTHRP 1414
            ANQAMS+N++ E+ ++A N   RT+P  +APP  RP L SV                 RP
Sbjct: 524  ANQAMSQNINGEDQSEAVNVDGRTLPGPAAPPPLRPGLPSV-----------------RP 566

Query: 1415 LPTSPG 1432
            LP  PG
Sbjct: 567  LPPPPG 572


>ref|XP_003536628.1| PREDICTED: probable splicing factor 3A subunit 1-like [Glycine max]
          Length = 801

 Score =  524 bits (1349), Expect = e-146
 Identities = 284/483 (58%), Positives = 347/483 (71%), Gaps = 6/483 (1%)
 Frame = +2

Query: 2    HAYYQHRLTELRSEVVHPS---PSHPEESAVSASASCTTDGNETVAD-VDATLAAPSARF 169
            HAYYQHRL+E R++        PS P +SAV  SA   ++G    A+ +D      SA+F
Sbjct: 105  HAYYQHRLSEFRAQNQSSGLQPPSQPADSAVPESAPSDSNGVAAAAEKIDV-----SAQF 159

Query: 170  GLVRRALEPPECEQYTVWHPEGITGEELDIIKLTAQFVARNGKSFLTGLASREINKPHFQ 349
              VR+ LEPPE EQYTV  PEGITGEELDIIKLTAQFVARNGKSFLTGL SRE+N P F 
Sbjct: 160  KAVRKVLEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFH 219

Query: 350  FLKPTNSKYLPFTKYSDAYSKVLMPPMGLIDKLR-SVADLATVLEHCLHRLDWERCQEQD 526
            FLKPT+S +  FT  +DAYSKVLMPP GL +KL+ SV+D+ TVLE C++RL+WER QEQ 
Sbjct: 220  FLKPTHSMFTFFTSLADAYSKVLMPPKGLPEKLKKSVSDMTTVLERCVNRLEWERSQEQA 279

Query: 527  KQKAEVEIQQERVQTALIDWHDFSVVETIEFTDDEDAELPPSMTLAEVMSWSNISAMEDQ 706
            +QKAE EI+QER+Q A+IDWHDF+VVETI+F DDED ELPP MT+ EV+  S ++AME++
Sbjct: 280  RQKAEDEIEQERIQMAMIDWHDFAVVETIDFADDEDEELPPPMTIEEVIRRSKVTAMEEE 339

Query: 707  PEVVEHGNEADMXXXXXXXXXXXXGMKAACLEETVWNMSERKAAAPGQPEPPMRIVKSWK 886
             ++VE G E +M            GM+AA LE+   ++ + +      PEPPMRIVK+WK
Sbjct: 340  -DIVEPGKEIEMEMDEEEAQLVEEGMRAASLEDRD-DVKQNEVRVTEDPEPPMRIVKNWK 397

Query: 887  RPEDRISAQRNPTKFVVSPITGELIPINEMAEHMRISLIDPKFKEQKDRTMAKIRKTTLA 1066
            RPE+RISA+R+ TKFVVSPITGELIPI+EM+EHMRISLIDPK+KEQK+R  AKIR+TTLA
Sbjct: 398  RPEERISAERDSTKFVVSPITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLA 457

Query: 1067 HDDEMVSNIVGLARTRPDIFGTTEEEVSNAVKEVIEKKKDEHPTQVIWNGRTVSTRITAN 1246
             DDE+  NIVGLARTRPDIFGTTEEEVSNAVK  IEK  DE P QVIW+G T S   TAN
Sbjct: 458  ADDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKINDEQPKQVIWDGHTGSIGRTAN 517

Query: 1247 QAMSRNVSEEEHTDAANSKTRTIPWVSA-PPRPDLASVHXXXXXXXXSAFMNLTHRPLPT 1423
            QAMS+ +  E+  DA N++ + +   +A PPRP + S+                 RPLP 
Sbjct: 518  QAMSQTIGSEDQNDAFNNEAKNLLGPAAPPPRPGMPSI-----------------RPLPP 560

Query: 1424 SPG 1432
             PG
Sbjct: 561  PPG 563