BLASTX nr result

ID: Coptis23_contig00009793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009793
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27297.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-bin...    98   6e-19
ref|XP_003529458.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B...    96   3e-18
emb|CAN80261.1| hypothetical protein VITISV_043950 [Vitis vinifera]    94   1e-17
ref|XP_003549572.1| PREDICTED: putative G3BP-like protein-like [...    92   4e-17

>emb|CBI27297.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/112 (49%), Positives = 70/112 (62%)
 Frame = -3

Query: 337 SYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQDKGYFVLNDIFRYVDEYETVESDAVAV 158
           SYK GVVV VTG L  KDNV+RKFTQSFFLAPQD GYFVLND+FRY+DE E++  +   +
Sbjct: 88  SYKDGVVVLVTGCLTGKDNVRRKFTQSFFLAPQDNGYFVLNDVFRYMDERESLMVE--TI 145

Query: 157 AVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTTPEVEVSYGNGEVVHEPSDN 2
           AVN                 +H+ +HP   NT+P VE    + E V + ++N
Sbjct: 146 AVNDVNENSPVAPLTPEPESTHVLDHPKSNNTSP-VEEDAADDEEVCDLTEN 196


>ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
           [Vitis vinifera]
          Length = 486

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/112 (49%), Positives = 70/112 (62%)
 Frame = -3

Query: 337 SYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQDKGYFVLNDIFRYVDEYETVESDAVAV 158
           SYK GVVV VTG L  KDNV+RKFTQSFFLAPQD GYFVLND+FRY+DE E++  +   +
Sbjct: 88  SYKDGVVVLVTGCLTGKDNVRRKFTQSFFLAPQDNGYFVLNDVFRYMDERESLMVE--TI 145

Query: 157 AVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTTPEVEVSYGNGEVVHEPSDN 2
           AVN                 +H+ +HP   NT+P VE    + E V + ++N
Sbjct: 146 AVNDVNENSPVAPLTPEPESTHVLDHPKSNNTSP-VEEDAADDEEVCDLTEN 196


>ref|XP_003529458.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
           [Glycine max]
          Length = 454

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/112 (47%), Positives = 69/112 (61%)
 Frame = -3

Query: 337 SYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQDKGYFVLNDIFRYVDEYETVESDAVAV 158
           SYK GV+V VTG L   DN+KRKFTQSFFLAPQDKGYFVLND+FRYVDEY++V+ ++V  
Sbjct: 84  SYKDGVIVVVTGCLTGSDNLKRKFTQSFFLAPQDKGYFVLNDVFRYVDEYKSVDIESVP- 142

Query: 157 AVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTTPEVEVSYGNGEVVHEPSDN 2
           A +                  H+ E  +P + T  V+   G  + V +P +N
Sbjct: 143 ANDAADESAPTDAFVPEPEAIHVAE-DVPASQTDVVDADIGVSKEVSQPLEN 193


>emb|CAN80261.1| hypothetical protein VITISV_043950 [Vitis vinifera]
          Length = 1124

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
 Frame = -3

Query: 337 SYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQDKGYFVLNDIFRYVDEYETVESDAVAV 158
           SYK GV V VTG + +KDNVKRKF QSFFLAPQD GYFVLNDIF Y++E ++++ +   V
Sbjct: 135 SYKEGVTVLVTGSVTLKDNVKRKFGQSFFLAPQDNGYFVLNDIFTYIEEKKSLQEN--FV 192

Query: 157 AVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTTP--EVEVSYGNGEVVHEPSDN 2
            V+G                +H+P+H + +  TP  E E    N   V +PSDN
Sbjct: 193 XVDGINETAPTAALTPDPEANHVPDHLVVDPATPSFEEEEDLNNVAEVCDPSDN 246


>ref|XP_003549572.1| PREDICTED: putative G3BP-like protein-like [Glycine max]
          Length = 460

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/111 (42%), Positives = 69/111 (62%)
 Frame = -3

Query: 337 SYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQDKGYFVLNDIFRYVDEYETVESDAVAV 158
           S+KGGV+V VTG L  KDNV+RKF+Q+FFLAPQ+KGY+VLND+FR+++E +T + ++ +V
Sbjct: 88  SHKGGVIVLVTGCLTGKDNVRRKFSQTFFLAPQEKGYYVLNDVFRFIEENDTPQINSSSV 147

Query: 157 AVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTTPEVEVSYGNGEVVHEPSD 5
           +V                   H P+H + +N T     +  NG  V+ P D
Sbjct: 148 SV---INENAEAVHEPESEDLHAPKHLVEDNATLAEGENLNNGAEVYHPQD 195


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