BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009792
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36205.1| unknown [Lotus japonicus]                              394   e-107
ref|XP_003519824.1| PREDICTED: signal recognition particle recep...   392   e-107
ref|XP_003607043.1| Signal recognition particle receptor subunit...   390   e-106
ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   389   e-106
gb|ACJ84671.1| unknown [Medicago truncatula]                          388   e-105

>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  394 bits (1011), Expect = e-107
 Identities = 189/259 (72%), Positives = 228/259 (88%)
 Frame = +1

Query: 64  MEGSEEIVKKLRELLQQSEKRIREIPQEQVYVAVAVLVATFLISLLIRLFKRTKSNTIIL 243
           M+  E   ++L  L   +   +R++P EQ+Y+A A+ V T L+ L +RLFKR K+NT++L
Sbjct: 1   MQELEHWKEELSRLWLTASDYLRQVPPEQLYIAAAIAVFTTLLLLSLRLFKRAKTNTVVL 60

Query: 244 TGLSGSGKTLVFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 423
           TGL+GSGKT++FYQLRDGS+HQGTVTSM+PNEGTF+LHSE+ K GK+KPVH++DVPGHSR
Sbjct: 61  TGLTGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSR 120

Query: 424 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 603
           LR KLDEYLPQAAG+VFVVDA+DFLPNCR A+EYLYDILTKGSVVKKKIP+LILCNKTDK
Sbjct: 121 LRPKLDEYLPQAAGVVFVVDAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDK 180

Query: 604 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 783
           VTAHTKEFIR+QLEKE+DKLR SR+A+S+AD+TNEFTLGV GE FSF QC NKVT A++S
Sbjct: 181 VTAHTKEFIRRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTTADAS 240

Query: 784 GLTGEISQLEQFIREYVRP 840
           GLTGEISQLE+FIREYV+P
Sbjct: 241 GLTGEISQLEEFIREYVKP 259


>ref|XP_003519824.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Glycine max]
          Length = 259

 Score =  392 bits (1007), Expect = e-107
 Identities = 191/258 (74%), Positives = 224/258 (86%)
 Frame = +1

Query: 64  MEGSEEIVKKLRELLQQSEKRIREIPQEQVYVAVAVLVATFLISLLIRLFKRTKSNTIIL 243
           ME  E+  ++L      +  R+RE+P  Q+Y A A+ + T L+ L IRLFKR KSNTI+L
Sbjct: 1   MEELEQWKEQLSHFANLALDRLREVPPNQLYAAAAIAIFTTLLLLSIRLFKRAKSNTIVL 60

Query: 244 TGLSGSGKTLVFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 423
           TGLSGSGKT++FYQLRDGS+HQGTVTSM+PNEGTF+LH+E  + GKIKPVHV+DVPGHSR
Sbjct: 61  TGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSR 120

Query: 424 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 603
           LR KLDEYLPQAAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIP+LILCNKTDK
Sbjct: 121 LRPKLDEYLPQAAGVVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPMLILCNKTDK 180

Query: 604 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 783
           VTAHTKEFIRKQ+EKE+DKLR SR+A+S ADI NEFTLGV GEPFSF QC NKVT A++S
Sbjct: 181 VTAHTKEFIRKQMEKEIDKLRASRSAISAADIANEFTLGVPGEPFSFTQCSNKVTTADAS 240

Query: 784 GLTGEISQLEQFIREYVR 837
           GLTGEISQLE+FIRE+V+
Sbjct: 241 GLTGEISQLEEFIREHVK 258


>ref|XP_003607043.1| Signal recognition particle receptor subunit beta [Medicago
           truncatula] gi|355508098|gb|AES89240.1| Signal
           recognition particle receptor subunit beta [Medicago
           truncatula]
          Length = 260

 Score =  390 bits (1001), Expect = e-106
 Identities = 185/254 (72%), Positives = 225/254 (88%)
 Frame = +1

Query: 76  EEIVKKLRELLQQSEKRIREIPQEQVYVAVAVLVATFLISLLIRLFKRTKSNTIILTGLS 255
           E+  ++   L   +   +R++P  Q+Y A A+ + T L+ L +R+ KRTKSNTI+LTGLS
Sbjct: 6   EQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTKSNTIVLTGLS 65

Query: 256 GSGKTLVFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTK 435
           GSGKT++FYQLRDGS+HQGTVTSM+PNEGTF+LH E+AK GKIKPVH++DVPGHSRLR K
Sbjct: 66  GSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHSRLRPK 125

Query: 436 LDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVTAH 615
           LDE+LPQAAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIP+LILCNKTDKVTAH
Sbjct: 126 LDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAH 185

Query: 616 TKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESSGLTG 795
           TKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT A++SGLTG
Sbjct: 186 TKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADASGLTG 245

Query: 796 EISQLEQFIREYVR 837
           EISQL++FIREYV+
Sbjct: 246 EISQLQEFIREYVK 259


>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
           [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
           protein product [Vitis vinifera]
          Length = 259

 Score =  389 bits (999), Expect = e-106
 Identities = 192/259 (74%), Positives = 223/259 (86%)
 Frame = +1

Query: 64  MEGSEEIVKKLRELLQQSEKRIREIPQEQVYVAVAVLVATFLISLLIRLFKRTKSNTIIL 243
           M+  E+   +L++  +Q  +   ++P+ Q+Y A+AV+  T    L IRLFKRTKSNT++L
Sbjct: 1   MDELEQWRIQLQQWSRQGAEWFHQMPETQLYAAIAVVFVTTFFLLSIRLFKRTKSNTVVL 60

Query: 244 TGLSGSGKTLVFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSR 423
           TGLSGSGKT +FYQL+DGSSH GTVTSMDPNEGTFVLHSE AK GKIKPVHV+DVPGHSR
Sbjct: 61  TGLSGSGKTTLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVVDVPGHSR 120

Query: 424 LRTKLDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDK 603
           LR KLDE+LPQAAG+VFVVDAL+FLPNCR A+EYLYDILTK SVVKKKIPVLILCNKTDK
Sbjct: 121 LRPKLDEFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKKKIPVLILCNKTDK 180

Query: 604 VTAHTKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESS 783
           VTAHTKEFIRKQLEKE++K R SR+A+S AD+ NEFTLGV GE F F QCHNKVTVA++S
Sbjct: 181 VTAHTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTVADAS 240

Query: 784 GLTGEISQLEQFIREYVRP 840
           GLTGEISQLE+FIREYV+P
Sbjct: 241 GLTGEISQLEEFIREYVKP 259


>gb|ACJ84671.1| unknown [Medicago truncatula]
          Length = 260

 Score =  388 bits (997), Expect = e-105
 Identities = 184/254 (72%), Positives = 225/254 (88%)
 Frame = +1

Query: 76  EEIVKKLRELLQQSEKRIREIPQEQVYVAVAVLVATFLISLLIRLFKRTKSNTIILTGLS 255
           E+  ++   L   +   +R++P  Q+Y A A+ + T L+ L +R+ KRT+SNTI+LTGLS
Sbjct: 6   EQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTESNTIVLTGLS 65

Query: 256 GSGKTLVFYQLRDGSSHQGTVTSMDPNEGTFVLHSESAKVGKIKPVHVIDVPGHSRLRTK 435
           GSGKT++FYQLRDGS+HQGTVTSM+PNEGTF+LH E+AK GKIKPVH++DVPGHSRLR K
Sbjct: 66  GSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHSRLRPK 125

Query: 436 LDEYLPQAAGLVFVVDALDFLPNCRGAAEYLYDILTKGSVVKKKIPVLILCNKTDKVTAH 615
           LDE+LPQAAG+VFVVDALDFLPNCR A+EYLYD+LTKGSVV+KKIP+LILCNKTDKVTAH
Sbjct: 126 LDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAH 185

Query: 616 TKEFIRKQLEKELDKLRTSRTALSEADITNEFTLGVAGEPFSFPQCHNKVTVAESSGLTG 795
           TKEFIR+Q+EKE+DKLR+SR+A+SEAD+TNEFTLGV GEPFSF QC NKVT A++SGLTG
Sbjct: 186 TKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADASGLTG 245

Query: 796 EISQLEQFIREYVR 837
           EISQL++FIREYV+
Sbjct: 246 EISQLQEFIREYVK 259