BLASTX nr result

ID: Coptis23_contig00009776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009776
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocar...    76   2e-12
ref|XP_002318906.1| cc-nbs resistance protein [Populus trichocar...    75   4e-12
ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocar...    75   4e-12
ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trich...    75   7e-12
ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trich...    74   9e-12

>ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832457|gb|EEE70934.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 566

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 MAHAVISGVLEQLRSILQT---DQVNLLAGVRKESEKLNDTLVLIQGVLEDAEEKQVNNG 61
           MA A++S +LEQL +I+     ++VNL+ GV+K  +KL   L+ IQ VLEDA+ KQV + 
Sbjct: 1   MAEALVSPILEQLTTIVAQQVQEEVNLVVGVKKHVDKLKSNLLAIQSVLEDADRKQVKDK 60

Query: 60  AVKAWLEQLTRISYDADDVL 1
           AV+ WL++L  + YD DDVL
Sbjct: 61  AVRDWLDKLKDVCYDIDDVL 80


>ref|XP_002318906.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222859579|gb|EEE97126.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 318

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 MAHAVISGVLEQLRSILQT---DQVNLLAGVRKESEKLNDTLVLIQGVLEDAEEKQVNNG 61
           MA A++S +LEQL +I+     +QVNL+ GV+K+ +KL   L+ IQ VLEDA+ KQV + 
Sbjct: 1   MADALVSPILEQLTTIVARQVQEQVNLVVGVKKQCDKLKSNLLDIQSVLEDADRKQVKDK 60

Query: 60  AVKAWLEQLTRISYDADDVL 1
           AV+ WL++L    YD DDVL
Sbjct: 61  AVRDWLDKLKDACYDMDDVL 80


>ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832447|gb|EEE70924.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 614

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 MAHAVISGVLEQLRSILQT---DQVNLLAGVRKESEKLNDTLVLIQGVLEDAEEKQVNNG 61
           MA A++S +LEQL  I+     ++V L+ GV+K+ +KL   L++IQ VLEDAE KQV + 
Sbjct: 1   MAEALLSPILEQLTKIVAQQVHEEVTLVGGVKKQVDKLKSNLIVIQSVLEDAERKQVKDK 60

Query: 60  AVKAWLEQLTRISYDADDVL 1
           AV+ W+++L  + YD DDVL
Sbjct: 61  AVRDWVDKLKDVCYDMDDVL 80


>ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832449|gb|EEE70926.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 766

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 MAHAVISGVLEQLRSILQT---DQVNLLAGVRKESEKLNDTLVLIQGVLEDAEEKQVNNG 61
           MA A++S +LEQL +I+     ++VNL  GV+K+ +KL   L+ IQ VLEDA+ KQV + 
Sbjct: 1   MAEALVSPILEQLTTIVAQQVQEEVNLGGGVKKQVDKLKSNLLAIQSVLEDADRKQVKDK 60

Query: 60  AVKAWLEQLTRISYDADDVL 1
           AV+ W+++L  + YD DDVL
Sbjct: 61  AVRDWVDKLKNVCYDIDDVL 80


>ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859576|gb|EEE97123.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 906

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 MAHAVISGVLEQLRSILQT---DQVNLLAGVRKESEKLNDTLVLIQGVLEDAEEKQVNNG 61
           MA A++S +LEQL +I+     ++VNL+ GV+K+ +KL   L+ IQ VLEDA+ KQV + 
Sbjct: 1   MAEALLSPILEQLTTIVAQQVQEEVNLVVGVKKQCDKLKSNLLDIQSVLEDADRKQVKDK 60

Query: 60  AVKAWLEQLTRISYDADDVL 1
           AV+ WL++L    YD DDVL
Sbjct: 61  AVRDWLDKLKDACYDMDDVL 80


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