BLASTX nr result

ID: Coptis23_contig00009758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009758
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...    64   2e-08
gb|AFW84961.1| putative MATE efflux family protein [Zea mays]          58   9e-07
gb|EEE55435.1| hypothetical protein OsJ_03575 [Oryza sativa Japo...    58   9e-07
ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea ma...    58   9e-07
gb|EEC71541.1| hypothetical protein OsI_03865 [Oryza sativa Indi...    58   9e-07

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = +1

Query: 220 KVGCHKPVVVRETSKLGYVLAATIFLNIIQLVLHGFAVGVGWQFQV 357
           KV   KP V++E SKLGY LAATIFLN IQ VLHG AVG GWQ  V
Sbjct: 366 KVFTGKPAVMQEASKLGYFLAATIFLNSIQPVLHGVAVGAGWQLSV 411


>gb|AFW84961.1| putative MATE efflux family protein [Zea mays]
          Length = 554

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +1

Query: 241 VVVRETSKLGYVLAATIFLNIIQLVLHGFAVGVGWQ 348
           VVVRET+KLGY+LAATIFLN +Q VL G A+G GWQ
Sbjct: 420 VVVRETAKLGYLLAATIFLNSVQPVLSGVAIGAGWQ 455


>gb|EEE55435.1| hypothetical protein OsJ_03575 [Oryza sativa Japonica Group]
          Length = 445

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 241 VVVRETSKLGYVLAATIFLNIIQLVLHGFAVGVGWQFQV 357
           V+VRET+KLGY+LAATIFLN IQ VL G A+G GWQ  V
Sbjct: 326 VLVRETAKLGYLLAATIFLNSIQPVLSGVAIGAGWQSSV 364


>ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea mays]
           gi|219888227|gb|ACL54488.1| unknown [Zea mays]
          Length = 490

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +1

Query: 241 VVVRETSKLGYVLAATIFLNIIQLVLHGFAVGVGWQ 348
           VVVRET+KLGY+LAATIFLN +Q VL G A+G GWQ
Sbjct: 356 VVVRETAKLGYLLAATIFLNSVQPVLSGVAIGAGWQ 391


>gb|EEC71541.1| hypothetical protein OsI_03865 [Oryza sativa Indica Group]
          Length = 477

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 241 VVVRETSKLGYVLAATIFLNIIQLVLHGFAVGVGWQFQV 357
           V+VRET+KLGY+LAATIFLN IQ VL G A+G GWQ  V
Sbjct: 358 VLVRETAKLGYLLAATIFLNSIQPVLSGVAIGAGWQSSV 396


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