BLASTX nr result

ID: Coptis23_contig00009752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009752
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241432.1| probable serine/threonine-protein kinase NAK...   156   1e-35
ref|NP_001240863.1| protein kinase APK1A, chloroplastic-like [Gl...   155   4e-35
ref|XP_002533148.1| Protein kinase APK1B, chloroplast precursor,...   154   8e-35
dbj|BAD12263.1| protein kinase [Brassica rapa]                        152   2e-34
gb|AFK41166.1| unknown [Medicago truncatula]                          152   2e-34

>ref|NP_001241432.1| probable serine/threonine-protein kinase NAK-like [Glycine max]
            gi|223452355|gb|ACM89505.1| protein kinase [Glycine max]
          Length = 410

 Score =  156 bits (395), Expect = 1e-35
 Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 2/132 (1%)
 Frame = +2

Query: 716  SPGSQSEGGNLEFSNLKSFTNDELKAATWNFGLDSVFREGSLGVVM-GWLNQHNLTASKP 892
            S  S+SEG  L+ SNLKSF+ +EL+AAT NF  DSV  EG  G V  GW+++H+L A+KP
Sbjct: 43   SVASRSEGEILQSSNLKSFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDEHSLAATKP 102

Query: 893  GMGIAIAVKRLNP-GVQSNTEWLASVNHLRRLYHPNLVRLIGYCLEAERQLLVYEFTHQG 1069
            G+G+ +AVKRLN  G Q + EWLA +N+L +L HPNLVRLIGYC E E +LLVYEF  +G
Sbjct: 103  GIGMIVAVKRLNQDGFQGHREWLAEINYLGKLQHPNLVRLIGYCFEDEHRLLVYEFMPKG 162

Query: 1070 SLEKHLFRRGSY 1105
            S+E HLFRRGSY
Sbjct: 163  SMENHLFRRGSY 174



 Score =  113 bits (282), Expect = 2e-22
 Identities = 58/104 (55%), Positives = 72/104 (69%)
 Frame = +3

Query: 1293 GSYRKPLTWSLRVSVALDAAKGLSFLHKAGKEVIHGDFKPSNILLDSNYNAKLCDFGLAK 1472
            GSY +P +WSLR+ +AL AAKGL+FLH    +VI+ DFK SNILLD+NY+AKL DFGLA+
Sbjct: 172  GSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTNYSAKLSDFGLAR 231

Query: 1473 DSQTSMIETTYGDTNLRLDSVNDYAAPEYLLEGRLSAKSDVYSF 1604
            D  T          + R+   + YAAPEYL  G L+ KSDVYSF
Sbjct: 232  DGPTG----DKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSF 271


>ref|NP_001240863.1| protein kinase APK1A, chloroplastic-like [Glycine max]
            gi|223452444|gb|ACM89549.1| putative protein kinase
            [Glycine max]
          Length = 419

 Score =  155 bits (391), Expect = 4e-35
 Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
 Frame = +2

Query: 728  QSEGGNLEFSNLKSFTNDELKAATWNFGLDSVFREGSLGVVM-GWLNQHNLTASKPGMGI 904
            +SEG  L+ SNLKSFT  ELK AT NF  DSV  EG  G V  GW+++++LTA+KPG GI
Sbjct: 48   RSEGEILQSSNLKSFTLSELKTATRNFRPDSVLGEGGFGSVFKGWIDENSLTATKPGTGI 107

Query: 905  AIAVKRLNP-GVQSNTEWLASVNHLRRLYHPNLVRLIGYCLEAERQLLVYEFTHQGSLEK 1081
             IAVKRLN  G+Q + EWLA VN+L +L HP+LVRLIG+CLE E +LLVYEF  +GSLE 
Sbjct: 108  VIAVKRLNQDGIQGHREWLAEVNYLGQLSHPHLVRLIGFCLEDEHRLLVYEFMPRGSLEN 167

Query: 1082 HLFRRGSY 1105
            HLFRRGSY
Sbjct: 168  HLFRRGSY 175



 Score =  121 bits (303), Expect = 6e-25
 Identities = 64/104 (61%), Positives = 74/104 (71%)
 Frame = +3

Query: 1293 GSYRKPLTWSLRVSVALDAAKGLSFLHKAGKEVIHGDFKPSNILLDSNYNAKLCDFGLAK 1472
            GSY +PL+WSLR+ VALDAAKGL+FLH A  +VI+ DFK SN+LLDS YNAKL DFGLAK
Sbjct: 173  GSYFQPLSWSLRLKVALDAAKGLAFLHSAEAKVIYRDFKTSNVLLDSKYNAKLSDFGLAK 232

Query: 1473 DSQTSMIETTYGDTNLRLDSVNDYAAPEYLLEGRLSAKSDVYSF 1604
            D  T          + R+     YAAPEYL  G L+AKSDVYSF
Sbjct: 233  DGPTG----DKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSF 272


>ref|XP_002533148.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus
            communis] gi|223527043|gb|EEF29229.1| Protein kinase
            APK1B, chloroplast precursor, putative [Ricinus communis]
          Length = 410

 Score =  154 bits (388), Expect = 8e-35
 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
 Frame = +2

Query: 728  QSEGGNLEFSNLKSFTNDELKAATWNFGLDSVFREGSLGVVM-GWLNQHNLTASKPGMGI 904
            ++EG  L+ SNLKSF+ +ELKAAT NF  DSV  EG  G V  GW+++H+LTA+KPG GI
Sbjct: 43   RTEGEILQSSNLKSFSFNELKAATRNFRPDSVLGEGGFGCVFKGWIDEHSLTAAKPGTGI 102

Query: 905  AIAVKRLNP-GVQSNTEWLASVNHLRRLYHPNLVRLIGYCLEAERQLLVYEFTHQGSLEK 1081
             IAVKRLN  G Q + EWLA +N+L +L HPNLV+LIGYCLE + +LLVYEF  +GSLE 
Sbjct: 103  VIAVKRLNQEGFQGHQEWLAEINYLGQLDHPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN 162

Query: 1082 HLFRRGSY 1105
            HLFRR SY
Sbjct: 163  HLFRRASY 170



 Score =  114 bits (285), Expect = 7e-23
 Identities = 59/103 (57%), Positives = 72/103 (69%)
 Frame = +3

Query: 1296 SYRKPLTWSLRVSVALDAAKGLSFLHKAGKEVIHGDFKPSNILLDSNYNAKLCDFGLAKD 1475
            SY +PL+W+LR+ +ALDAAKGL+FLH    +VI+ DFK SNILLDSNY AKL DFGLAKD
Sbjct: 169  SYVQPLSWNLRIQIALDAAKGLAFLHSDKAKVIYRDFKASNILLDSNYRAKLSDFGLAKD 228

Query: 1476 SQTSMIETTYGDTNLRLDSVNDYAAPEYLLEGRLSAKSDVYSF 1604
              T     +    + R+     YAAPEY+  G L+ KSDVYSF
Sbjct: 229  GPTG----SKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSF 267


>dbj|BAD12263.1| protein kinase [Brassica rapa]
          Length = 404

 Score =  152 bits (384), Expect = 2e-34
 Identities = 87/147 (59%), Positives = 101/147 (68%), Gaps = 10/147 (6%)
 Frame = +2

Query: 695  DDTSLIGSPGS--------QSEGGNLEFSNLKSFTNDELKAATWNFGLDSVFREGSLGVV 850
            +DT  +GS  S        ++EG  L+  NLK F+  ELKAAT NF LDSV  EG  G V
Sbjct: 29   NDTQSMGSKCSSVSVRTSPRTEGEILQSPNLKCFSFAELKAATRNFRLDSVLGEGGFGCV 88

Query: 851  M-GWLNQHNLTASKPGMGIAIAVKRLN-PGVQSNTEWLASVNHLRRLYHPNLVRLIGYCL 1024
              GW+++ +LTASKPG G+ IAVKRLN  G Q + EWLA VN+L RL HPNLV+LIGYCL
Sbjct: 89   FKGWIDEESLTASKPGTGMVIAVKRLNIEGWQGHQEWLAEVNYLGRLSHPNLVKLIGYCL 148

Query: 1025 EAERQLLVYEFTHQGSLEKHLFRRGSY 1105
            E E  LLVYEF   GSLE HLFRRGSY
Sbjct: 149  EDEHHLLVYEFMPCGSLENHLFRRGSY 175



 Score =  110 bits (276), Expect = 8e-22
 Identities = 57/104 (54%), Positives = 70/104 (67%)
 Frame = +3

Query: 1293 GSYRKPLTWSLRVSVALDAAKGLSFLHKAGKEVIHGDFKPSNILLDSNYNAKLCDFGLAK 1472
            GSY +PL+W++R+ +AL  AKGL+FLH A  +VI+ DFK SNILLDSNYNAKL DFGLAK
Sbjct: 173  GSYFEPLSWNIRLKIALGCAKGLAFLHSAETQVIYRDFKTSNILLDSNYNAKLSDFGLAK 232

Query: 1473 DSQTSMIETTYGDTNLRLDSVNDYAAPEYLLEGRLSAKSDVYSF 1604
            D  T          + R+     Y  P YLL G L+ KSDVYS+
Sbjct: 233  DGPTG----DNSHVSTRVIGTYGYVDPGYLLNGHLTTKSDVYSY 272


>gb|AFK41166.1| unknown [Medicago truncatula]
          Length = 407

 Score =  152 bits (384), Expect = 2e-34
 Identities = 78/129 (60%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
 Frame = +2

Query: 725  SQSEGGNLEFSNLKSFTNDELKAATWNFGLDSVFREGSLGVVM-GWLNQHNLTASKPGMG 901
            S+SEG  L+ SNLKSF+ +E++AAT NF  DSV  EG  G V  GW+++H+  A+KPGMG
Sbjct: 46   SRSEGEILQSSNLKSFSYNEVRAATRNFRPDSVLGEGGFGSVFKGWIDEHSHAATKPGMG 105

Query: 902  IAIAVKRLNP-GVQSNTEWLASVNHLRRLYHPNLVRLIGYCLEAERQLLVYEFTHQGSLE 1078
            I +AVKRLN  G Q + EWLA +N+L +L HPNLV+LIGYC E E +LLVYEF  +GS+E
Sbjct: 106  IIVAVKRLNQEGHQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSME 165

Query: 1079 KHLFRRGSY 1105
             HLFRRGSY
Sbjct: 166  NHLFRRGSY 174



 Score =  115 bits (288), Expect = 3e-23
 Identities = 60/104 (57%), Positives = 72/104 (69%)
 Frame = +3

Query: 1293 GSYRKPLTWSLRVSVALDAAKGLSFLHKAGKEVIHGDFKPSNILLDSNYNAKLCDFGLAK 1472
            GSY +P +WSLR+ +AL AAKGL+FLH    +VI+ DFK SNILLDSNY+AKL DFGLA+
Sbjct: 172  GSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDSNYDAKLSDFGLAR 231

Query: 1473 DSQTSMIETTYGDTNLRLDSVNDYAAPEYLLEGRLSAKSDVYSF 1604
            D  T          + R+     YAAPEYL  G L+AKSDVYSF
Sbjct: 232  DGPTG----DKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSF 271


Top