BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009747
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   277   e-100
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...   273   3e-98
ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-97
ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation...   270   4e-97
ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation...   269   4e-96

>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Vitis vinifera]
          Length = 946

 Score =  277 bits (709), Expect(2) = e-100
 Identities = 174/377 (46%), Positives = 224/377 (59%), Gaps = 25/377 (6%)
 Frame = -1

Query: 1342 SDWETDEDDGIKYEKPQ---GDSWTKEMDKI-----RGYFEDPSKIVTFDMIKNIF---I 1196
            SD E DE+DG   E      G  W K+M K      + + +DPS+I T+D +   F   +
Sbjct: 207  SDSEEDEEDGEDREDSAAEAGGGWEKKMSKKDKLMDKQFMKDPSEI-TWDTVNKKFKEIV 265

Query: 1195 ATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIVWTQLKVVPR--GHVPVTVWKKC 1022
            A R RKG  R+E++EQLT L   AK PAQK++IL  +V  Q  V P   GH+P+ VWKKC
Sbjct: 266  AVRGRKGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKC 325

Query: 1021 MQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDGEVRIWRAALPDLYAWVAFEFCI 842
            +QNMLVI+DIL ++  I++DD  E    +  KG +  G +R+W   +  L   +  EF  
Sbjct: 326  VQNMLVILDILVQHSNILVDDVVEPEENETQKGADYKGTIRVWGNLVAFLER-IDVEFFK 384

Query: 841  GLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRKDFVEAAIVARRMMEHLYYKPRE 662
             L+     +  Y E LR EP+ L+L+Q V  YL+ R  DF  A+ VA R +E +YYKP+E
Sbjct: 385  SLQCIDPHTREYVERLRDEPLFLVLAQNVQDYLE-RVGDFKAASKVALRRVELIYYKPQE 443

Query: 661  AYDAMRKLVEQTEGGA-----------VQVYWWPAPSLISKHAQQR-PTFPENGSALMAE 518
             YDAM+ L EQTE              V+    P   +++     R PTFPEN   LM  
Sbjct: 444  VYDAMKNLAEQTEDTENGESEAGEEPRVEESRGPPAFVVTPEVVPRKPTFPENSRTLMDI 503

Query: 517  LRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVSRDLLLMSHLQDKVQHLDASTKILFNR 338
            L + I  HG++  K  AML  IYHHAI DEFS +RDLLLMSHLQD VQH+D ST+ILFNR
Sbjct: 504  LVSLIYNHGDERTKARAMLCDIYHHAILDEFSTARDLLLMSHLQDNVQHMDISTQILFNR 563

Query: 337  TMAQLGLCAFRAGLIAE 287
             MAQLGLCAFR GLIAE
Sbjct: 564  AMAQLGLCAFRVGLIAE 580



 Score =  117 bits (293), Expect(2) = e-100
 Identities = 58/80 (72%), Positives = 63/80 (78%)
 Frame = -2

Query: 240 LYADGSIKKLLCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLLEV 61
           LY+ G +K+LL QGVS    H KT +QE +E R QMPYH HINLELLE VHLICAMLLEV
Sbjct: 588 LYSGGRVKELLAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLLEV 647

Query: 60  PNMAVKTHDAKGKVISKTFR 1
           PNMA  THDAK KVISKTFR
Sbjct: 648 PNMAANTHDAKRKVISKTFR 667


>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  273 bits (699), Expect(2) = 3e-98
 Identities = 169/398 (42%), Positives = 234/398 (58%), Gaps = 40/398 (10%)
 Frame = -1

Query: 1357 DREFDSDWETDEDDGIKYEKPQGDS----------------WTKEMDKI-----RGYFED 1241
            D E+DSD E  + D ++  + + DS                W +++ K      R + ++
Sbjct: 184  DEEYDSDGEIIDPDQLQKPEAKSDSEASQYEDEKPDAGEGPWDQKLSKKDRLLDRQFMKN 243

Query: 1240 PSKIVTFDMIKNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIVWTQL 1070
            PS+I T+D +   F   +A R RKG  R E++EQLT L + AK PAQK++IL  +V  Q 
Sbjct: 244  PSEI-TWDAVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQF 302

Query: 1069 KVVP--RGHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDGEVRI 896
             V P   GH+P+ VWKKC+QNML+I+DIL +   I++DDS E    +  KG   +G +R+
Sbjct: 303  DVNPGLNGHMPINVWKKCVQNMLIILDILVQYPNIMVDDSVEPDENETQKGAEHNGTIRV 362

Query: 895  WRAALPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRKDFVE 716
            W   +  L   +  EF   L+     +  Y E LR EP  L+L+Q V +YL+ R  +F  
Sbjct: 363  WGNLVAFLER-IDVEFFKSLQCIDPHTRDYVERLRDEPTFLVLAQNVQEYLE-RVGNFKA 420

Query: 715  AAIVARRMMEHLYYKPREAYDAMRKLVEQTEGG--------------AVQVYWWPAPSLI 578
            A+ VA R +E +YYKP+E YDAMRKL E TE G               +   +   P ++
Sbjct: 421  ASKVALRRVELIYYKPQEVYDAMRKLTELTEDGDNGGEASEKEFEESRIPTAFVVTPEVV 480

Query: 577  SKHAQQRPTFPENGSALMAELRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVSRDLLLM 398
            ++    +PTFPEN   LM  L + I K+G++  K  AML  IYHHA+ DEFS++RDLLLM
Sbjct: 481  TR----KPTFPENSRTLMDILVSMIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLM 536

Query: 397  SHLQDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEA 284
            SHLQD VQH+D ST+ILFNR M+QLGLCAFR GLI+EA
Sbjct: 537  SHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEA 574



 Score =  113 bits (282), Expect(2) = 3e-98
 Identities = 56/80 (70%), Positives = 62/80 (77%)
 Frame = -2

Query: 240 LYADGSIKKLLCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLLEV 61
           LY+ G +K+LL QGVS    H KT +QE +E R QMPYH HINLELLEAVHL+ AMLLEV
Sbjct: 581 LYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEV 640

Query: 60  PNMAVKTHDAKGKVISKTFR 1
           PNMA   HDAK KVISKTFR
Sbjct: 641 PNMAANVHDAKRKVISKTFR 660


>ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|222867983|gb|EEF05114.1|
            predicted protein [Populus trichocarpa]
          Length = 895

 Score =  268 bits (685), Expect(2) = 2e-97
 Identities = 161/365 (44%), Positives = 225/365 (61%), Gaps = 17/365 (4%)
 Frame = -1

Query: 1327 DEDDGIKYEKPQGDSWTKEMDKI-----RGYFEDPSKIVTFDMIKNIF---IATRVRKGI 1172
            +++D +  +  +   W K M K      + + +DPS+I T+D++   F   +A R R+G 
Sbjct: 192  EDEDNVDDQTEKDGGWEKMMSKKDKLMDKQFAKDPSEI-TWDIVNKKFKEIVAARGRRGT 250

Query: 1171 ARLEEIEQLTLLAEFAKIPAQKVDILVYIVWTQLKVVP--RGHVPVTVWKKCMQNMLVIV 998
             R E++EQLT L + AK PAQK++IL  +V  Q  V P   GH+P+ VWK C+QNML+I+
Sbjct: 251  GRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVSPGLSGHMPINVWKNCVQNMLIIL 310

Query: 997  DILEENLKIVLDDSGEFGFEDISKGINCDGEVRIWRAALPDLYAWVAFEFCIGLKSARLE 818
            DILE+   IV+DD+ E    +  KG + +G +RIW   +  L   +  EF   L+     
Sbjct: 311  DILEQYPSIVVDDTVEPDENETQKGGDHNGPIRIWGNLVAFLER-IDSEFFKSLQCIDPH 369

Query: 817  SWAYKEMLRCEPVLLLLSQKVFKYLQLRRKDFVEAAIVARRMMEHLYYKPREAYDAMRKL 638
            +  Y E L+ EP+ L+L+Q   +YL+    D   AA VA + +E +YYKP+E YDAMRKL
Sbjct: 370  THEYVERLQDEPMFLVLAQNAQEYLE-HVGDLKAAAKVALKRVELIYYKPQEVYDAMRKL 428

Query: 637  VEQTEGGA------VQVYWWPAPSLI-SKHAQQRPTFPENGSALMAELRAFIDKHGNDAA 479
            VEQTE G       V+     +  ++ S+   ++PTFPEN  A+M  L + I K G++  
Sbjct: 429  VEQTEDGGNGEEPKVEGSRGSSAFVVTSELVPRKPTFPENSRAMMDALVSLIYKSGDERT 488

Query: 478  KVDAMLFAIYHHAINDEFSVSRDLLLMSHLQDKVQHLDASTKILFNRTMAQLGLCAFRAG 299
            K  AML  IYHHA+ DE S SRDLLLMSHLQD +QH+D S++ILFNR MAQLGLCAFR G
Sbjct: 489  KARAMLCDIYHHALLDELSTSRDLLLMSHLQDNIQHMDISSQILFNRAMAQLGLCAFRVG 548

Query: 298  LIAEA 284
            +I EA
Sbjct: 549  MITEA 553



 Score =  115 bits (289), Expect(2) = 2e-97
 Identities = 57/80 (71%), Positives = 64/80 (80%)
 Frame = -2

Query: 240 LYADGSIKKLLCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLLEV 61
           LY+ G +K+LL QGVS    H KTQ+QE +E R QMPYH HINLELLE+VHLICAMLLEV
Sbjct: 560 LYSGGRVKELLAQGVSQSRYHEKTQEQERLERRRQMPYHMHINLELLESVHLICAMLLEV 619

Query: 60  PNMAVKTHDAKGKVISKTFR 1
           PNMA   +DAK KVISKTFR
Sbjct: 620 PNMAANIYDAKRKVISKTFR 639


>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 925

 Score =  270 bits (689), Expect(2) = 4e-97
 Identities = 169/398 (42%), Positives = 231/398 (58%), Gaps = 40/398 (10%)
 Frame = -1

Query: 1357 DREFDSDWETDEDDGIKYEKPQGDS----------------WTKEMDKI-----RGYFED 1241
            + E+DSD E  + D ++  + + DS                W +++ K      R + ++
Sbjct: 183  EEEYDSDGEIIDPDQLQKPEAKSDSEASQYEDEKPDAGEGPWDQKLSKKDRLLDRQFMKN 242

Query: 1240 PSKIVTFDMIKNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIVWTQL 1070
            PS+I T+D +   F   +A R RKG  R E++EQLT L + AK PAQK++IL  +V  Q 
Sbjct: 243  PSEI-TWDAVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQF 301

Query: 1069 KVVP--RGHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDGEVRI 896
             V P   GHVP+ VWKKC+QNML+I+DIL +   IV DD  E    +  KG   +G +R+
Sbjct: 302  DVNPGLNGHVPINVWKKCVQNMLIILDILVQYPNIVADDLVEPDENETQKGPEHNGTIRV 361

Query: 895  WRAALPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRKDFVE 716
            W   +  L   +  EF   L+     +  Y E LR EP  L+L+Q V +YL+ R  +F  
Sbjct: 362  WGNLVAFLER-IDVEFFKSLQCIDPHTRDYVERLRDEPTFLVLAQNVQEYLE-RVGNFKA 419

Query: 715  AAIVARRMMEHLYYKPREAYDAMRKLVEQTEGG--------------AVQVYWWPAPSLI 578
            A+ VA R +E +YYKP+E YDAMRKL E TE G               +   +   P ++
Sbjct: 420  ASKVALRRVELIYYKPQEVYDAMRKLTELTEDGDNGGEASEKEFEESRIPTAFVVTPEVV 479

Query: 577  SKHAQQRPTFPENGSALMAELRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVSRDLLLM 398
            ++    +PTFPEN   LM  L + I K+G++  K  AML  IYHHA+ DEFS +RDLLLM
Sbjct: 480  AR----KPTFPENSRTLMDVLVSMIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLM 535

Query: 397  SHLQDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEA 284
            SHLQD VQH+D ST+ILFNR M+QLGLCAFR GLI+EA
Sbjct: 536  SHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEA 573



 Score =  113 bits (282), Expect(2) = 4e-97
 Identities = 56/80 (70%), Positives = 62/80 (77%)
 Frame = -2

Query: 240 LYADGSIKKLLCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLLEV 61
           LY+ G +K+LL QGVS    H KT +QE +E R QMPYH HINLELLEAVHL+ AMLLEV
Sbjct: 580 LYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEV 639

Query: 60  PNMAVKTHDAKGKVISKTFR 1
           PNMA   HDAK KVISKTFR
Sbjct: 640 PNMAANVHDAKRKVISKTFR 659


>ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  269 bits (688), Expect(2) = 4e-96
 Identities = 165/381 (43%), Positives = 230/381 (60%), Gaps = 25/381 (6%)
 Frame = -1

Query: 1351 EFDSDWETDEDDGIKYEKPQGDSWTKEMDKI-----RGYFEDPSKIVTFDMIKNIF---I 1196
            E  SD E  + D  K +   G  W +++ K      + + +DPS+I T+D +   F   +
Sbjct: 200  EAKSDSEASQYDNEKQDAGDGP-WDQKLSKKDRLLDKQFMKDPSEI-TWDTVNKKFKEVV 257

Query: 1195 ATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIVWTQLKVVP--RGHVPVTVWKKC 1022
            A R RKG  R E++EQLT L + AK  AQK++IL  +V  Q  V P   GH+P+ VWKKC
Sbjct: 258  AARGRKGTGRFEQVEQLTFLTKVAKTAAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKC 317

Query: 1021 MQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDGEVRIWRAALPDLYAWVAFEFCI 842
            +QNMLVI+DIL ++  IV+DDS E    +  KG++ +G +R+W   +  L   +  EF  
Sbjct: 318  VQNMLVILDILVQHPNIVVDDSVEPDENETQKGVDYNGPIRVWGNLVAFLER-IDVEFFK 376

Query: 841  GLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRKDFVEAAIVARRMMEHLYYKPRE 662
             L+     +  Y E LR EP+ L+L+Q V +YL+ R  +F  A+ VA R +E +YYKP+E
Sbjct: 377  SLQCIDPHTRDYVERLRDEPLFLVLAQNVQEYLE-RVGNFKAASKVALRRVELIYYKPQE 435

Query: 661  AYDAMRKLVEQTEGG---------------AVQVYWWPAPSLISKHAQQRPTFPENGSAL 527
             Y AM+KL E TE G                +   +   P ++++    +PTFPEN   +
Sbjct: 436  VYVAMKKLTELTEDGDNGVEASEEKGFEESRIPTAFVATPEVVAR----KPTFPENSRTI 491

Query: 526  MAELRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVSRDLLLMSHLQDKVQHLDASTKIL 347
            M  L + I K+G++  K  AML  IYHHA+ DEFS++RDLLLMSHLQD VQH+D ST+IL
Sbjct: 492  MDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSVQHMDISTQIL 551

Query: 346  FNRTMAQLGLCAFRAGLIAEA 284
            FNR M+QLGLCAFR GLI+EA
Sbjct: 552  FNRAMSQLGLCAFRVGLISEA 572



 Score =  110 bits (275), Expect(2) = 4e-96
 Identities = 54/80 (67%), Positives = 61/80 (76%)
 Frame = -2

Query: 240 LYADGSIKKLLCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLLEV 61
           LY+ G +K+LL QGVS    H KT +QE +E R QMPYH HINLELLE VHL+ AMLLEV
Sbjct: 579 LYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLETVHLVSAMLLEV 638

Query: 60  PNMAVKTHDAKGKVISKTFR 1
           PNMA   HDAK K+ISKTFR
Sbjct: 639 PNMAANVHDAKRKLISKTFR 658