BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009742
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   318   1e-84
ref|XP_003564787.1| PREDICTED: DNA replication complex GINS prot...   289   7e-76
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   288   9e-76
dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]    278   1e-72
gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| T...   278   1e-72

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  318 bits (815), Expect = 1e-84
 Identities = 165/225 (73%), Positives = 194/225 (86%)
 Frame = -2

Query: 786 MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 607
           MA+G++EG  F  ++ +   IATT  DVE +KRAWRNEKA+PEIL FQ+ LV R R QI+
Sbjct: 1   MASGSEEGSGFPADDYES-LIATT--DVELLKRAWRNEKAAPEILHFQTALVQRSREQIQ 57

Query: 606 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNR 427
           L E  VEEF +NGTDPLT+SLYQMDLDR+QFLLRSYLRIRL KIEKYM +I KT D+W+R
Sbjct: 58  LMEETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSR 116

Query: 426 LSEQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCK 247
           LSEQEQKFAKRC DDME+HL QSVLSRLP GYQS++KQS++SEEDD+VPEP+LDTFVFCK
Sbjct: 117 LSEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFCK 176

Query: 246 SKGSLGAFQLDESGDEIVDLVADDLYVLRYKSVKPLIENGQIDIV 112
           SKGS+ AFQLD+S  E+VDLVADDLY+LRY SVKPLIE+GQID+V
Sbjct: 177 SKGSIEAFQLDDS-KEVVDLVADDLYILRYNSVKPLIESGQIDLV 220


>ref|XP_003564787.1| PREDICTED: DNA replication complex GINS protein SLD5-like
           [Brachypodium distachyon]
          Length = 215

 Score =  289 bits (739), Expect = 7e-76
 Identities = 141/209 (67%), Positives = 172/209 (82%)
 Frame = -2

Query: 738 DDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTDP 559
           +D + A    DVE +KRAWRNEKA+PEIL F S LV R R QI+L E  +E+F  NG D 
Sbjct: 7   EDTASAAATTDVELLKRAWRNEKAAPEILRFDSPLVSRAREQIQLLEETLEDFTDNGVDD 66

Query: 558 LTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDM 379
           L +SLYQMDLDR+ FLLRSYLR+RL KIEKYMI+ISK+ D+ +RLS QEQ+FAK C + M
Sbjct: 67  LVVSLYQMDLDRALFLLRSYLRLRLQKIEKYMIHISKSDDLMSRLSLQEQRFAKSCTEIM 126

Query: 378 EKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESGDE 199
           EKHL QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+K  +GAFQLD+ G+E
Sbjct: 127 EKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQLDDIGEE 186

Query: 198 IVDLVADDLYVLRYKSVKPLIENGQIDIV 112
           IVDLVADDLYVLRYKS+K L+ENG+ID++
Sbjct: 187 IVDLVADDLYVLRYKSIKGLVENGRIDLI 215


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  288 bits (738), Expect = 9e-76
 Identities = 154/225 (68%), Positives = 185/225 (82%)
 Frame = -2

Query: 786 MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 607
           M +G++E   F  ++ +   IATT  DVE +KRAW NEKA+PEIL FQ+      R QI+
Sbjct: 1   MVSGSEEESGFPADDYES-LIATT--DVELLKRAWMNEKAAPEILHFQT------REQIQ 51

Query: 606 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNR 427
           L E  VEEF +NGTDPLT+SLYQM+LDR+QFLLRSYL+IRL KIEKYM +I KT D+W+ 
Sbjct: 52  LMEETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRLQKIEKYMFHILKT-DVWSW 110

Query: 426 LSEQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCK 247
           LSEQEQKFAKRC DDME+HL QSVLSRLP GYQS++KQS++SEEDD+VPEP+LDTFVF K
Sbjct: 111 LSEQEQKFAKRCTDDMERHLEQSVLSRLPDGYQSILKQSVASEEDDMVPEPRLDTFVFYK 170

Query: 246 SKGSLGAFQLDESGDEIVDLVADDLYVLRYKSVKPLIENGQIDIV 112
           SKGS+ AFQLD+S  E+VDLVADDLY+LRY SV PLIE+GQID+V
Sbjct: 171 SKGSIEAFQLDDS-KEVVDLVADDLYILRYNSVNPLIESGQIDLV 214


>dbj|BAK06665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 217

 Score =  278 bits (711), Expect = 1e-72
 Identities = 138/215 (64%), Positives = 173/215 (80%)
 Frame = -2

Query: 756 FETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFE 577
           +E E+    S A T  DVE +KRAWRNEKA+PEIL F S LV R R QI+L E  +++F 
Sbjct: 4   WEDEDSAAASAAAT-TDVELLKRAWRNEKAAPEILHFDSALVSRAREQIQLLEETLDDFT 62

Query: 576 QNGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAK 397
            NG D L +SLYQMDLDR+ FLLRSYLR+RL KIEKYM +I+ + D+ +RLS+QEQ+FAK
Sbjct: 63  DNGVDDLVVSLYQMDLDRTLFLLRSYLRLRLQKIEKYMAHIANSDDLLSRLSQQEQRFAK 122

Query: 396 RCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQL 217
            C + MEKHL QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+K  +GAFQL
Sbjct: 123 SCKEIMEKHLEQSVLSKLPYGYDSVTRQSLSSTEDDMVPEPQLDTFVFCKTKSDVGAFQL 182

Query: 216 DESGDEIVDLVADDLYVLRYKSVKPLIENGQIDIV 112
           D+ G+E+VDLVADDLYVLRYKS+K L+E G+ID++
Sbjct: 183 DDIGEEVVDLVADDLYVLRYKSIKGLVEAGRIDLI 217


>gb|ACN35320.1| unknown [Zea mays] gi|414590788|tpg|DAA41359.1| TPA: SLD5 [Zea
           mays]
          Length = 219

 Score =  278 bits (711), Expect = 1e-72
 Identities = 136/204 (66%), Positives = 171/204 (83%)
 Frame = -2

Query: 723 ATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTDPLTISL 544
           ATT  DVE +KRAWRNEKA+PEIL F S LV R+R Q +L E  +++F  +G D L +SL
Sbjct: 18  ATT--DVELLKRAWRNEKAAPEILRFDSPLVSRVREQTQLLEETLDDFADSGVDDLVVSL 75

Query: 543 YQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDMEKHLT 364
           YQMDLDR+ FLLRSYLR+RL KIEKY ++IS++ D+ +RLS+QE++FAK C + MEKHL 
Sbjct: 76  YQMDLDRTLFLLRSYLRLRLQKIEKYTMHISRSEDLLSRLSQQERRFAKSCAEIMEKHLE 135

Query: 363 QSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESGDEIVDLV 184
           QSVLS+LP+GY S+ +QS+SS EDD+VPEPQLDTFVFCK+KG +GAFQLD+ G+E+VDLV
Sbjct: 136 QSVLSKLPYGYDSVSRQSLSSTEDDMVPEPQLDTFVFCKTKGDVGAFQLDDIGEEVVDLV 195

Query: 183 ADDLYVLRYKSVKPLIENGQIDIV 112
           ADDLYVLRYKSVK LIE G+ID++
Sbjct: 196 ADDLYVLRYKSVKGLIEGGRIDLI 219