BLASTX nr result

ID: Coptis23_contig00009732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009732
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Viti...   415   e-113
ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like ...   413   e-113
emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]   413   e-113
ref|XP_002309063.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like ...   406   e-111

>ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
          Length = 391

 Score =  415 bits (1066), Expect = e-113
 Identities = 200/340 (58%), Positives = 243/340 (71%), Gaps = 1/340 (0%)
 Frame = +1

Query: 199  WLPWLIPLFVVINTILFIITMYINNCPKNNVSTSRHCIAHFLGRFSFQPLKENPLLGPSS 378
            W PW++P FVV N  +F+ITM+INNCPKN+VS    C+A FLGRFSFQPLKENPLLGPSS
Sbjct: 56   WFPWMVPTFVVANIAMFLITMFINNCPKNSVS----CVADFLGRFSFQPLKENPLLGPSS 111

Query: 379  ITLDKMGAKVVSKVVHGHQGWRLFTAMWLHAGVFHLLANMLSLLFIGIRLEQEFGFVRIG 558
             TL+KMGA  VSKVVH HQ WRL + +WLHAGVFH+LANMLSL+FIGIRLEQEFGFVRIG
Sbjct: 112  STLEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIG 171

Query: 559  MLYLISGIGGNVLSALFIQDSIXXXXXXXXXXXXXXXXXELLTNWTIYSNKXXXXXXXXX 738
            +LY++SG GG++LS+LFIQ SI                 EL+TNWTIY+NK         
Sbjct: 172  LLYVVSGFGGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLIL 231

Query: 739  XXXXXXXXXXXPHVDNFAHIGGFATGFLLGFVILIRPQYGWVSKRSVPPGYIT-SAKSKH 915
                       PHVDNFAHIGGF +GFLLGFV LIRPQ+GWVS+R+  PG+I  S K KH
Sbjct: 232  IIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKH 291

Query: 916  KMYQYXXXXXXXXXXXXGFSVGLVMLFKGVNANEHCSWCHYLSCVPTSKWNCKTKPTSCM 1095
            KMYQY            GF+VG+VML +GV+ N+ CSWCHYLSCVPTSKW+CK++   C 
Sbjct: 292  KMYQYVLWVMSLILLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCE 351

Query: 1096 STQSENELILECEGRGKTHTYPLTNASESQIKQLCLELCS 1215
            ST   N+L L C   G+++ Y L + + SQ++QLC +LC+
Sbjct: 352  STTIGNQLNLTCLSNGRSNIYLLPDDNTSQVQQLCSQLCN 391


>ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
            gi|449473549|ref|XP_004153913.1| PREDICTED: inactive
            rhomboid protein 1-like [Cucumis sativus]
            gi|449508492|ref|XP_004163327.1| PREDICTED: inactive
            rhomboid protein 1-like [Cucumis sativus]
          Length = 383

 Score =  413 bits (1062), Expect = e-113
 Identities = 200/373 (53%), Positives = 255/373 (68%)
 Frame = +1

Query: 97   SRRGVHPVEIDASRQSQDIIGXXXXXXXXXXXXXWLPWLIPLFVVINTILFIITMYINNC 276
            SR G H V+  A+R S+                 W+PWL+P+FVV N+++F I+MY+N+C
Sbjct: 16   SRHGEHEVQPAAAR-SRPSGTSPIEFGQYRPFKKWVPWLVPVFVVANSVMFTISMYVNDC 74

Query: 277  PKNNVSTSRHCIAHFLGRFSFQPLKENPLLGPSSITLDKMGAKVVSKVVHGHQGWRLFTA 456
            PKN+ S    CI  FLGRFSFQPLKENPLLGPSS TL+KMGA  V KVV+GHQ WRL + 
Sbjct: 75   PKNSAS----CIGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVYGHQAWRLISC 130

Query: 457  MWLHAGVFHLLANMLSLLFIGIRLEQEFGFVRIGMLYLISGIGGNVLSALFIQDSIXXXX 636
            +WLHAGVFH+LANMLSL+FIGIRLEQEFGFVRIGMLY++SG GG+++SALFIQ  I    
Sbjct: 131  LWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGA 190

Query: 637  XXXXXXXXXXXXXELLTNWTIYSNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHIGGFATG 816
                         ELLTNWTIY+NK                    PHVDNFAHIGGF +G
Sbjct: 191  SGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISG 250

Query: 817  FLLGFVILIRPQYGWVSKRSVPPGYITSAKSKHKMYQYXXXXXXXXXXXXGFSVGLVMLF 996
            FLLGFV L+RPQ+GWVS+R+ P G  +++KSK+K YQY            GF+VGLV LF
Sbjct: 251  FLLGFVFLVRPQFGWVSQRNAPRGNSSTSKSKYKPYQYVLWVVSLVLLIAGFAVGLVFLF 310

Query: 997  KGVNANEHCSWCHYLSCVPTSKWNCKTKPTSCMSTQSENELILECEGRGKTHTYPLTNAS 1176
            +G N N+ CSWCHYLSC+PTSKW+C ++  SC ++Q  N+L + C   G++ +Y LTN+S
Sbjct: 311  RGENMNDRCSWCHYLSCIPTSKWSCNSQKFSCETSQLGNQLNMTCLSNGRSGSYSLTNSS 370

Query: 1177 ESQIKQLCLELCS 1215
             ++ +++C +LCS
Sbjct: 371  STEAEKICSQLCS 383


>emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
          Length = 391

 Score =  413 bits (1061), Expect = e-113
 Identities = 200/340 (58%), Positives = 241/340 (70%), Gaps = 1/340 (0%)
 Frame = +1

Query: 199  WLPWLIPLFVVINTILFIITMYINNCPKNNVSTSRHCIAHFLGRFSFQPLKENPLLGPSS 378
            W PW++P FVV N  +F+ITM+INNCPKN+VS    C+A FLGRFSFQPLKENPLLGPSS
Sbjct: 56   WFPWMVPTFVVANIAMFLITMFINNCPKNSVS----CVADFLGRFSFQPLKENPLLGPSS 111

Query: 379  ITLDKMGAKVVSKVVHGHQGWRLFTAMWLHAGVFHLLANMLSLLFIGIRLEQEFGFVRIG 558
             TL+KMGA  VSKVVH HQ WRL + +WLHAGVFH+LANMLSL+FIGIRLEQEFGFVRIG
Sbjct: 112  STLEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIG 171

Query: 559  MLYLISGIGGNVLSALFIQDSIXXXXXXXXXXXXXXXXXELLTNWTIYSNKXXXXXXXXX 738
            +LY++SG GG++LS+LFIQ SI                 EL+TNWTIY+NK         
Sbjct: 172  LLYVVSGFGGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLIL 231

Query: 739  XXXXXXXXXXXPHVDNFAHIGGFATGFLLGFVILIRPQYGWVSKRSVPPGYIT-SAKSKH 915
                       PHVDNFAHIGGF +GFLLGFV LIRPQ+GWVS+R+  PG+I  S K KH
Sbjct: 232  IIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAXSVKPKH 291

Query: 916  KMYQYXXXXXXXXXXXXGFSVGLVMLFKGVNANEHCSWCHYLSCVPTSKWNCKTKPTSCM 1095
            KMYQY            GF+VG+VML +GV  N+ CSWCHYLSCVPTSKW+CK++   C 
Sbjct: 292  KMYQYVLWVMSLILLTVGFTVGMVMLLRGVXGNDXCSWCHYLSCVPTSKWSCKSQQVYCE 351

Query: 1096 STQSENELILECEGRGKTHTYPLTNASESQIKQLCLELCS 1215
            ST   N+L L C   G+++ Y L +   SQ++QLC +LC+
Sbjct: 352  STTIGNQLNLTCLSNGRSNIYLLPDDXTSQVQQLCSQLCN 391


>ref|XP_002309063.1| predicted protein [Populus trichocarpa] gi|222855039|gb|EEE92586.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  410 bits (1055), Expect = e-112
 Identities = 202/339 (59%), Positives = 233/339 (68%), Gaps = 1/339 (0%)
 Frame = +1

Query: 199  WLPWLIPLFVVINTILFIITMYINNCPKNNVSTSRHCIAHFLGRFSFQPLKENPLLGPSS 378
            W PWLIP FV+ N ++FIITMY+NNCPKN VS    CIA FLGRFSFQP KENPLLGPSS
Sbjct: 32   WWPWLIPAFVIANVVMFIITMYVNNCPKNYVS----CIARFLGRFSFQPFKENPLLGPSS 87

Query: 379  ITLDKMGAKVVSKVVHGHQGWRLFTAMWLHAGVFHLLANMLSLLFIGIRLEQEFGFVRIG 558
            I+L KMGA  V KVV GHQ WRL T  WLH GVFHLLANMLSLL IGIRLEQEFGFV++G
Sbjct: 88   ISLQKMGALDVQKVVDGHQWWRLITCNWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVG 147

Query: 559  MLYLISGIGGNVLSALFIQDSIXXXXXXXXXXXXXXXXXELLTNWTIYSNKXXXXXXXXX 738
            +LY+ISG GG++LSALFIQ +I                 EL+TNWTIY+N+         
Sbjct: 148  LLYVISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYANQVAAFITLVV 207

Query: 739  XXXXXXXXXXXPHVDNFAHIGGFATGFLLGFVILIRPQYGWVSKRSVPPGYI-TSAKSKH 915
                       PHVDNFAHIGGF +GFLLGFV LIRPQ+GW S+R  P GYI  S KSK 
Sbjct: 208  IIAVNLALGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWFSQRRAPLGYIPASVKSKF 267

Query: 916  KMYQYXXXXXXXXXXXXGFSVGLVMLFKGVNANEHCSWCHYLSCVPTSKWNCKTKPTSCM 1095
            K YQ             G ++G+V+L +GV+ANEHCSWCHYLSCVPT KW+CKT+P  C+
Sbjct: 268  KTYQCALWIISLILLIAGLTIGMVLLLRGVDANEHCSWCHYLSCVPTGKWSCKTEPAYCL 327

Query: 1096 STQSENELILECEGRGKTHTYPLTNASESQIKQLCLELC 1212
            STQ  N+L L C   GK+  Y L  A+ SQI+ LC  LC
Sbjct: 328  STQIGNQLNLTCSSNGKSSVYILPGATSSQIQGLCTGLC 366


>ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 385

 Score =  406 bits (1044), Expect = e-111
 Identities = 208/378 (55%), Positives = 247/378 (65%), Gaps = 4/378 (1%)
 Frame = +1

Query: 94   SSRRG---VHPVEIDASRQSQDIIGXXXXXXXXXXXXXWLPWLIPLFVVINTILFIITMY 264
            +S+RG   VHPV   A+ ++ ++               W  WLIPLFVV N ++F+ITMY
Sbjct: 15   NSKRGTTMVHPV---AAAETVEVPIQYPREEEVKHYRKWFSWLIPLFVVANIVMFVITMY 71

Query: 265  INNCPKNNVSTSRHCIAHFLGRFSFQPLKENPLLGPSSITLDKMGAKVVSKVVHGHQGWR 444
            +NNCP+N+VS    CIA FLGRFSFQP KENPLLGPSS+TL KMGA  VS+VVH HQGWR
Sbjct: 72   VNNCPRNSVS----CIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGWR 127

Query: 445  LFTAMWLHAGVFHLLANMLSLLFIGIRLEQEFGFVRIGMLYLISGIGGNVLSALFIQDSI 624
            L T MWLHAGVFHLLANML +L IGIRLEQEFGFV IG+L++ISG GG++LSALFIQ +I
Sbjct: 128  LITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSNI 187

Query: 625  XXXXXXXXXXXXXXXXXELLTNWTIYSNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHIGG 804
                             EL+TNW+IY NK                    PHVDNFAHIGG
Sbjct: 188  SVGASGALFGLLGGMLSELITNWSIYDNKLTALLTLVIIIVINLAVGILPHVDNFAHIGG 247

Query: 805  FATGFLLGFVILIRPQYGWVSKRSVPPGYITS-AKSKHKMYQYXXXXXXXXXXXXGFSVG 981
            F TGFLLGFV LIRPQ+GWV++R  P  Y     K K K YQ             G SVG
Sbjct: 248  FLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKPKFKKYQCILWVFSLIILVVGLSVG 307

Query: 982  LVMLFKGVNANEHCSWCHYLSCVPTSKWNCKTKPTSCMSTQSENELILECEGRGKTHTYP 1161
            LV L +GV+AN+HCSWCHYLSCVPTSKW+C T+   C S Q  N+L + C   GK+ TY 
Sbjct: 308  LVALLQGVDANDHCSWCHYLSCVPTSKWSCHTEAAYCQSNQLGNQLNVTCSSNGKSSTYF 367

Query: 1162 LTNASESQIKQLCLELCS 1215
            + N + SQI+QLC +LCS
Sbjct: 368  MQNPTSSQIQQLCTQLCS 385


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