BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009730
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15398.3| unnamed protein product [Vitis vinifera]              234   8e-60
ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   234   8e-60
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   217   1e-54
ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   208   6e-52

>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  234 bits (597), Expect = 8e-60
 Identities = 116/143 (81%), Positives = 127/143 (88%)
 Frame = -1

Query: 576 ALLFLIPKELKFLSYLKEAKVPLKEYEFDQTKLANVQSHLEKLVENNFYLNKSAKEAYRS 397
           ALLFLIP+EL+FL YLK AKVP+KEYE+D  KLANVQSHLEKLV NN+YLNKSAK+AYRS
Sbjct: 351 ALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDAYRS 410

Query: 396 YILAYNSHSMKDIFNVHSLDLQAVATSFCFSGPPKINLSIDSGASKFRKKVRKFEGSHHG 217
           YILAYNSHSMKDIFNVH LDLQAVA+SFCFS PPK+NLSIDS ASKFRKK  K EGS +G
Sbjct: 411 YILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRNG 470

Query: 216 INENKNPYGRSRGGDDKRQFVRY 148
            +E+ NPYGR RG DDKRQFVRY
Sbjct: 471 FSES-NPYGRQRGQDDKRQFVRY 492


>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
           [Vitis vinifera]
          Length = 580

 Score =  234 bits (597), Expect = 8e-60
 Identities = 116/143 (81%), Positives = 127/143 (88%)
 Frame = -1

Query: 576 ALLFLIPKELKFLSYLKEAKVPLKEYEFDQTKLANVQSHLEKLVENNFYLNKSAKEAYRS 397
           ALLFLIP+EL+FL YLK AKVP+KEYE+D  KLANVQSHLEKLV NN+YLNKSAK+AYRS
Sbjct: 439 ALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYLNKSAKDAYRS 498

Query: 396 YILAYNSHSMKDIFNVHSLDLQAVATSFCFSGPPKINLSIDSGASKFRKKVRKFEGSHHG 217
           YILAYNSHSMKDIFNVH LDLQAVA+SFCFS PPK+NLSIDS ASKFRKK  K EGS +G
Sbjct: 499 YILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRNG 558

Query: 216 INENKNPYGRSRGGDDKRQFVRY 148
            +E+ NPYGR RG DDKRQFVRY
Sbjct: 559 FSES-NPYGRQRGQDDKRQFVRY 580


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  219 bits (559), Expect = 2e-55
 Identities = 110/143 (76%), Positives = 123/143 (86%)
 Frame = -1

Query: 576 ALLFLIPKELKFLSYLKEAKVPLKEYEFDQTKLANVQSHLEKLVENNFYLNKSAKEAYRS 397
           ALLFLIP+EL+FL YLK AKVP+KEYEFDQ KLANVQS LEKLV NN+YLNKSAK+AYRS
Sbjct: 435 ALLFLIPEELQFLRYLKAAKVPVKEYEFDQKKLANVQSQLEKLVANNYYLNKSAKDAYRS 494

Query: 396 YILAYNSHSMKDIFNVHSLDLQAVATSFCFSGPPKINLSIDSGASKFRKKVRKFEGSHHG 217
           Y+LAYNSHSMKDIFNVH LDLQAVA SFCFS PPK+NL+++S ASKFRKK  K  GS +G
Sbjct: 495 YMLAYNSHSMKDIFNVHRLDLQAVAASFCFSSPPKVNLNMESNASKFRKKTHK--GSRNG 552

Query: 216 INENKNPYGRSRGGDDKRQFVRY 148
            NE+ NPYGR   GD+KRQF RY
Sbjct: 553 FNES-NPYGRQSDGDEKRQFARY 574


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score =  217 bits (552), Expect = 1e-54
 Identities = 111/143 (77%), Positives = 123/143 (86%)
 Frame = -1

Query: 576 ALLFLIPKELKFLSYLKEAKVPLKEYEFDQTKLANVQSHLEKLVENNFYLNKSAKEAYRS 397
           ALLFLIP+EL+FL YLK AKVP+KEYEFD  KLANVQSHLEKLV NN+YLNKSAK+AYRS
Sbjct: 451 ALLFLIPEELQFLRYLKAAKVPVKEYEFDVKKLANVQSHLEKLVANNYYLNKSAKDAYRS 510

Query: 396 YILAYNSHSMKDIFNVHSLDLQAVATSFCFSGPPKINLSIDSGASKFRKKVRKFEGSHHG 217
           YILAYNSHSMKDIFNVH LDLQAVA SFCFS PPK+NL+IDS ASKFRKK  K  GS +G
Sbjct: 511 YILAYNSHSMKDIFNVHRLDLQAVAASFCFSCPPKVNLNIDSNASKFRKKAHK--GSRNG 568

Query: 216 INENKNPYGRSRGGDDKRQFVRY 148
            +E+ NPYGR R  D+ RQFVR+
Sbjct: 569 FSES-NPYGRQRDEDNTRQFVRH 590


>ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
           sativus]
          Length = 579

 Score =  208 bits (529), Expect = 6e-52
 Identities = 102/143 (71%), Positives = 123/143 (86%)
 Frame = -1

Query: 576 ALLFLIPKELKFLSYLKEAKVPLKEYEFDQTKLANVQSHLEKLVENNFYLNKSAKEAYRS 397
           ALLFLIP+EL+FL YLK AKVP+KEYEF   +LANVQSHLEKLV +N++LNK+AK+AYR+
Sbjct: 439 ALLFLIPEELQFLRYLKAAKVPVKEYEFSDKRLANVQSHLEKLVGSNYHLNKAAKDAYRT 498

Query: 396 YILAYNSHSMKDIFNVHSLDLQAVATSFCFSGPPKINLSIDSGASKFRKKVRKFEGSHHG 217
           Y+LAYNSHSMKDIFNVH LDLQA+A SFCFS PPK+NL+IDS ASK RKK RK EGS + 
Sbjct: 499 YLLAYNSHSMKDIFNVHRLDLQAIAASFCFSNPPKVNLNIDSSASKLRKKTRKVEGSRNR 558

Query: 216 INENKNPYGRSRGGDDKRQFVRY 148
            +E+ NPYG+ +  +D+RQFVRY
Sbjct: 559 FSES-NPYGK-KNAEDERQFVRY 579