BLASTX nr result

ID: Coptis23_contig00009723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009723
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   201   5e-50
dbj|BAD28661.1| putative ubiquitin conjugating enzyme 7 interact...   192   3e-47
ref|NP_001063191.1| Os09g0419500 [Oryza sativa Japonica Group] g...   192   3e-47
gb|EEE69716.1| hypothetical protein OsJ_29388 [Oryza sativa Japo...   192   3e-47

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  203 bits (516), Expect = 1e-50
 Identities = 84/121 (69%), Positives = 100/121 (82%)
 Frame = +1

Query: 1   QKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKCEEFQKLGKGERE 180
           QKFYCPYK+CSALLI DEG V+KESECP+CRR+FCAQC+VPWHSGI C EFQKL K ER 
Sbjct: 208 QKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERG 267

Query: 181 REDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAAMNPSNHNCTQC 360
           REDI++M LAK   W+RCPKCKF+VE+S GC++++CRCGF FCYNC A  +  +H C  C
Sbjct: 268 REDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAPSSTISHICPHC 327

Query: 361 R 363
           R
Sbjct: 328 R 328


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  201 bits (511), Expect = 5e-50
 Identities = 83/120 (69%), Positives = 99/120 (82%)
 Frame = +1

Query: 1   QKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKCEEFQKLGKGERE 180
           QKFYCPYK+CSALLI DEG V+KESECP+CRR+FCAQC+VPWHSGI C EFQKL K ER 
Sbjct: 208 QKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERG 267

Query: 181 REDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAAMNPSNHNCTQC 360
           REDI++M LAK   W+RCPKCKF+VE+S GC++++CRCGF FCYNC A  +  +H C  C
Sbjct: 268 REDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAPSSTISHICPHC 327


>dbj|BAD28661.1| putative ubiquitin conjugating enzyme 7 interacting protein 4
           [Oryza sativa Japonica Group]
           gi|50725960|dbj|BAD33487.1| putative ubiquitin
           conjugating enzyme 7 interacting protein 4 [Oryza sativa
           Japonica Group] gi|215707177|dbj|BAG93637.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 398

 Score =  192 bits (487), Expect = 3e-47
 Identities = 79/124 (63%), Positives = 97/124 (78%), Gaps = 3/124 (2%)
 Frame = +1

Query: 4   KFYCPYKNCSALLIDDEG---VVVKESECPHCRRMFCAQCKVPWHSGIKCEEFQKLGKGE 174
           KFYCP+ +CSALL+DD G     + ++ECPHC RMFCAQCKVPWH G  C EFQKLGK E
Sbjct: 273 KFYCPFSDCSALLVDDPGDGEEAITDAECPHCSRMFCAQCKVPWHGGATCAEFQKLGKDE 332

Query: 175 REREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAAMNPSNHNCT 354
           R R+D++L K+AKD KWQRCPKCK +VER EGC+F+ CRCG  FCY CA+ M+  NH+C 
Sbjct: 333 RGRDDLLLRKVAKDSKWQRCPKCKMYVERVEGCVFIICRCGHCFCYLCASPMSRDNHHCK 392

Query: 355 QCRR 366
           +C+R
Sbjct: 393 KCKR 396


>ref|NP_001063191.1| Os09g0419500 [Oryza sativa Japonica Group]
           gi|50252484|dbj|BAD28662.1| putative ubiquitin
           conjugating enzyme 7 interacting protein 4 [Oryza sativa
           Japonica Group] gi|50725961|dbj|BAD33488.1| putative
           ubiquitin conjugating enzyme 7 interacting protein 4
           [Oryza sativa Japonica Group]
           gi|113631424|dbj|BAF25105.1| Os09g0419500 [Oryza sativa
           Japonica Group]
          Length = 317

 Score =  192 bits (487), Expect = 3e-47
 Identities = 79/124 (63%), Positives = 97/124 (78%), Gaps = 3/124 (2%)
 Frame = +1

Query: 4   KFYCPYKNCSALLIDDEG---VVVKESECPHCRRMFCAQCKVPWHSGIKCEEFQKLGKGE 174
           KFYCP+ +CSALL+DD G     + ++ECPHC RMFCAQCKVPWH G  C EFQKLGK E
Sbjct: 192 KFYCPFSDCSALLVDDPGDGEEAITDAECPHCSRMFCAQCKVPWHGGATCAEFQKLGKDE 251

Query: 175 REREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAAMNPSNHNCT 354
           R R+D++L K+AKD KWQRCPKCK +VER EGC+F+ CRCG  FCY CA+ M+  NH+C 
Sbjct: 252 RGRDDLLLRKVAKDSKWQRCPKCKMYVERVEGCVFIICRCGHCFCYLCASPMSRDNHHCK 311

Query: 355 QCRR 366
           +C+R
Sbjct: 312 KCKR 315


>gb|EEE69716.1| hypothetical protein OsJ_29388 [Oryza sativa Japonica Group]
          Length = 398

 Score =  192 bits (487), Expect = 3e-47
 Identities = 79/124 (63%), Positives = 97/124 (78%), Gaps = 3/124 (2%)
 Frame = +1

Query: 4   KFYCPYKNCSALLIDDEG---VVVKESECPHCRRMFCAQCKVPWHSGIKCEEFQKLGKGE 174
           KFYCP+ +CSALL+DD G     + ++ECPHC RMFCAQCKVPWH G  C EFQKLGK E
Sbjct: 273 KFYCPFSDCSALLVDDPGDGEEAITDAECPHCSRMFCAQCKVPWHGGATCAEFQKLGKDE 332

Query: 175 REREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAAMNPSNHNCT 354
           R R+D++L K+AKD KWQRCPKCK +VER EGC+F+ CRCG  FCY CA+ M+  NH+C 
Sbjct: 333 RGRDDLLLRKVAKDSKWQRCPKCKMYVERVEGCVFIICRCGHCFCYLCASPMSRDNHHCK 392

Query: 355 QCRR 366
           +C+R
Sbjct: 393 KCKR 396


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