BLASTX nr result

ID: Coptis23_contig00009720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009720
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis ...   119   4e-25
emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]   115   5e-24
ref|XP_002512821.1| conserved hypothetical protein [Ricinus comm...    98   1e-18
ref|XP_002512820.1| conserved hypothetical protein [Ricinus comm...    95   1e-17
ref|XP_003624518.1| hypothetical protein MTR_7g084240 [Medicago ...    86   7e-15

>ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis vinifera]
           gi|297745643|emb|CBI40808.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  119 bits (298), Expect = 4e-25
 Identities = 78/176 (44%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
 Frame = -1

Query: 497 MLRCFSLPN---------PYPNSRDDETPTRSNSQPSPTVSLTHEYSLAVQTKSYTEIWS 345
           ML+C SL +         P  NSR+D TP RS SQ SPTV+LT EY+LAVQT SY EIWS
Sbjct: 1   MLQCLSLKSSASTSTTTVPVENSRED-TP-RSISQTSPTVNLTREYTLAVQTNSYNEIWS 58

Query: 344 KXXXXXXXXXXXXXXXHYQNXXXXXXXXXXXXXXXXXHPNRELVDQALHRVKPTTLTKLV 165
           K                                     P+RE V  AL   +  TLT+LV
Sbjct: 59  KIHVRHQDDYTNTDPDQ-DTDGEREEDVQQLRLAHVLRPDRECVQDALRHARSNTLTRLV 117

Query: 164 STYFEHSEKTSYLLCLLVQHSIEKARVIYTPLNDLLEILPL--DSLSQLQCDRVYD 3
           S YF+HSE TS  LCLL+  S+  A  +Y+PL+DLL+ILPL  DSL+Q QC++ +D
Sbjct: 118 SDYFDHSENTSQ-LCLLLHRSVHHAHSLYSPLHDLLDILPLDSDSLTQSQCNQAFD 172


>emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]
          Length = 996

 Score =  115 bits (289), Expect = 5e-24
 Identities = 72/155 (46%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
 Frame = -1

Query: 461  NSRDDETPTRSNSQPSPTVSLTHEYSLAVQTKSYTEIWSKXXXXXXXXXXXXXXXHYQNX 282
            NSR+D TP RS SQ SPTV+LT EY+LAVQT SY EIWSK                    
Sbjct: 642  NSRED-TP-RSISQTSPTVNLTREYTLAVQTNSYNEIWSKIHVRHQDDYTNTDPDQ-DTD 698

Query: 281  XXXXXXXXXXXXXXXXHPNRELVDQALHRVKPTTLTKLVSTYFEHSEKTSYLLCLLVQHS 102
                             P+RE V  AL   +  TLT+LVS YF+HSE TS  LCLL+  S
Sbjct: 699  GEREEDVQQLRLAHVLRPDRECVQDALRHARSNTLTRLVSDYFDHSENTSQ-LCLLLHRS 757

Query: 101  IEKARVIYTPLNDLLEILPL--DSLSQLQCDRVYD 3
            +  A  +Y+PL+DLL+ILPL  DSL+Q QC++ +D
Sbjct: 758  VHHAHSLYSPLHDLLDILPLDSDSLTQSQCBQAFD 792


>ref|XP_002512821.1| conserved hypothetical protein [Ricinus communis]
           gi|223547832|gb|EEF49324.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 67/176 (38%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
 Frame = -1

Query: 491 RCFSLPNPYPNSRD-----------DETPTRSNSQPSPTVSLTHEYSLAVQTKSYTEIWS 345
           R  S+PN  P   D           D TP     Q SP V+LT EY+L VQ+ S+ E+ S
Sbjct: 32  RSTSIPNSPPTIIDLNHDCEAGNSTDGTPVSCTLQ-SPVVNLTREYALYVQSNSFNEMRS 90

Query: 344 KXXXXXXXXXXXXXXXHYQNXXXXXXXXXXXXXXXXXHPNRELVDQALHRVKPTTLTKLV 165
           +                  +                 HPNR+ V+ AL   KP TLT+LV
Sbjct: 91  RIHHQEIENGEQIE----SSLNIDVEDVRQFVLAQVLHPNRQCVEDALRHAKPNTLTRLV 146

Query: 164 STYFEHSEKTSYLLCLLVQHSIEKARVIYTPLNDLLEILP--LDSLSQLQCDRVYD 3
           S YF+HSE T+  LCLL+  S+ +AR IY+P+ +LLE+LP  +DSL+Q QCD  Y+
Sbjct: 147 SNYFDHSESTTD-LCLLLHRSVFRARDIYSPIRNLLEVLPVEMDSLTQSQCDYAYE 201


>ref|XP_002512820.1| conserved hypothetical protein [Ricinus communis]
           gi|223547831|gb|EEF49323.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 389

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
 Frame = -1

Query: 449 DETPTRSNSQPSPTVSLTHEYSLAVQTKSYTEIWSKXXXXXXXXXXXXXXXHYQNXXXXX 270
           D TP  S  Q SP V+L HEYSL VQ+ S+ EI+S                   N     
Sbjct: 39  DGTPVSSTLQ-SPVVNLGHEYSLYVQSNSFNEIYSGTHHQEITNGEQIE----SNFDADD 93

Query: 269 XXXXXXXXXXXXHPNRELVDQALHRVKPTTLTKLVSTYFEHSEKTSYLLCLLVQHSIEKA 90
                       HPNR+ V+ AL   KP T+T+LVS +F+HSE  +  LCLL++ S+ +A
Sbjct: 94  EGARQFVLARVLHPNRQCVEDALRHAKPNTVTRLVSNFFDHSESATD-LCLLLRRSVFRA 152

Query: 89  RVIYTPLNDLLEILP--LDSLSQLQCDRVYD 3
           R IY+P+++LLE LP  L+SL+Q  CD  ++
Sbjct: 153 RAIYSPIHNLLEKLPIELESLTQSHCDNAHE 183


>ref|XP_003624518.1| hypothetical protein MTR_7g084240 [Medicago truncatula]
           gi|355499533|gb|AES80736.1| hypothetical protein
           MTR_7g084240 [Medicago truncatula]
          Length = 381

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 62/181 (34%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
 Frame = -1

Query: 506 ISTMLRCFSLPN--PYPNSRDDETPTRSNSQPSPTVS----LTHEYSLAVQTKSYTEIWS 345
           ++TML C S  +  P P +     P  S  Q SPT S    ++ E+ LA+Q  SY EI +
Sbjct: 1   MNTMLECLSFNSLTPSPRNVPPPLPPHSQEQQSPTPSSSPNVSREFDLAIQGPSYNEIRT 60

Query: 344 KXXXXXXXXXXXXXXXHYQ----NXXXXXXXXXXXXXXXXXHPNRELVDQALHRVKP-TT 180
                             Q    +                  P+   V + L   KP +T
Sbjct: 61  MIQIPLQPHNIQIQQHEVQELEDDEEEDEDSQHRNILTQVLQPDANSVRETLANSKPKST 120

Query: 179 LTKLVSTYFEHSEKTSYLLCLLVQHSIEKARVIYTPLNDLLEILPLD--SLSQLQCDRVY 6
           LT+LVS+YF+HSE TS+L CL++  ++ +AR +Y P+ DL+ +LP D  SLSQ QCD  Y
Sbjct: 121 LTRLVSSYFDHSETTSHL-CLILFRTVNRAREMYNPVFDLISVLPADCSSLSQPQCDTAY 179

Query: 5   D 3
           D
Sbjct: 180 D 180


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