BLASTX nr result
ID: Coptis23_contig00009719
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00009719
(1482 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28700.3| unnamed protein product [Vitis vinifera] 620 e-175
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera] 604 e-170
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm... 577 e-162
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif... 519 e-145
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2... 504 e-140
>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 620 bits (1598), Expect = e-175
Identities = 321/475 (67%), Positives = 385/475 (81%), Gaps = 3/475 (0%)
Frame = -2
Query: 1421 MDTLVLLYPSVPKRPCLEPHXXXXXXXSRA--PPKTEEKNMESFLETFLGLFNNNNDTSS 1248
MDTL L PS+ KRPC+ + P ++ ME LE FL L +++ S
Sbjct: 1 MDTL-LEAPSMAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSSGP--S 57
Query: 1247 IDESLERLIEMKTNDCDQNQLIESALELGSVLLEAGKKLQRKRFSKHNSMAWVLPPDLTI 1068
+ S E+L++ + D DQN LI+ AL LGS LLEAGK+ RKR S HNS+ W LPPDLTI
Sbjct: 58 LHLSFEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTI 117
Query: 1067 KVFSLLDTQSLCYASATCSMFNKCAMDPLCYSNIDLTSVVPKINNTVVNTMIRRADRKLQ 888
KVFS+LDTQSLCY +ATCSMF+KCAMDPLCY+NIDLT+VVPK+NN VV+TMI+RA + LQ
Sbjct: 118 KVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQ 177
Query: 887 SLKLGIMXXXXXXXXXXXPMYYTIRNSVDA-GFSWNDRRSRQGKESYVLTRSCLMSLNME 711
SL+LGI+ P+ YTIRNSVDA GFSWND+RSRQGKES +L+RSCL +L+ +
Sbjct: 178 SLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGD 237
Query: 710 NGSSGPLLRRLHLYNIDRMDNTALCAALSSCPSLVDLEIVGLHVELRQTLESVSKNCRLL 531
+G++G LL+RLHLYNI+RMDNTALCAALS+CPSL+DLEIVGLHVELRQTL SVS NC L+
Sbjct: 238 SGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLI 297
Query: 530 ERLFFESSRTGRDDSLKSPTCVDLVNGCPNMTSLALRGFKLQDYKARILLKGFRKLKFVD 351
ERLFFESS+TGRDDSLKSPTCVDLVN CP++TSLALRGFKL DYK RIL+KGF KLK+VD
Sbjct: 298 ERLFFESSKTGRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKGFHKLKYVD 357
Query: 350 FSTSYSITGSFLRNLGSGTNGHLLEILILRDCMHLKEVEVARFLTAILAGDFKFLRHLDI 171
FSTSYSITG+FLRNLGS T G+LLE+L+LRDCMHLKEVEVA+FL+AI+AGDF+ LR LDI
Sbjct: 358 FSTSYSITGTFLRNLGSSTGGNLLEVLLLRDCMHLKEVEVAKFLSAIIAGDFRLLRLLDI 417
Query: 170 SNREGLASESDWDARCYSPSIILPVKRVLEERPEITLLAEFPPEGSFIEMEQIMN 6
SNREGLASE DW RCY+ S+I P+K+V EERP+I LLAEFP EGS IE+EQ+++
Sbjct: 418 SNREGLASEGDWYYRCYNSSMI-PIKQVSEERPDICLLAEFPSEGSIIEIEQMID 471
>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
Length = 603
Score = 604 bits (1558), Expect = e-170
Identities = 321/504 (63%), Positives = 385/504 (76%), Gaps = 32/504 (6%)
Frame = -2
Query: 1421 MDTLVLLYPSVPKRPCLEPHXXXXXXXSRA--PPKTEEKNMESFLETFLGLFNNNNDTSS 1248
MDTL L PS+ KRPC+ + P ++ ME LE FL L +++ S
Sbjct: 1 MDTL-LEAPSMAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSSGP--S 57
Query: 1247 IDESLERLIEMKTNDCDQNQLIESALELGSVLLEAGKKLQRKRFSKHNSMAWVLPPDLTI 1068
+ S E+L++ + D DQN LI+ AL LGS LLEAGK+ RKR S HNS+ W LPPDLTI
Sbjct: 58 LHLSFEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTI 117
Query: 1067 KVFSLLDTQSLCYASATCSMFNKCAMDPLCYSNIDLTSVVPKINNTVVNTMIRRADRKLQ 888
KVFS+LDTQSLCY +ATCSMF+KCAMDPLCY+NIDLT+VVPK+NN VV+TMI+RA + LQ
Sbjct: 118 KVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQ 177
Query: 887 SLKLGIMXXXXXXXXXXXPMYYTIRNSVDA-GFSWNDRRSRQGKESYVLTRSCLMSLNME 711
SL+LGI+ P+ YTIRNSVDA GFSWND+RSRQGKES +L+RSCL +L+ +
Sbjct: 178 SLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGD 237
Query: 710 NGSSGPLLRRLHLYNIDRMDNTALCAALSSCPSLVDLEIVGLHVELRQTLESVSKNCRLL 531
+G++G LL+RLHLYNI+RMDNTALCAALS+CPSL+DLEIVGLHVELRQTL SVS NC L+
Sbjct: 238 SGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLI 297
Query: 530 ERLFFESSRTGRDDSLKSPTCVDLVNGCPNMTSLALRGFKLQDYKARILLK--------- 378
ERLFFESS+TGRDDSLKSPTCVDLVN CP++TSLALRGFKL DYK RIL+K
Sbjct: 298 ERLFFESSKTGRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKVVVHNFLIG 357
Query: 377 --------------------GFRKLKFVDFSTSYSITGSFLRNLGSGTNGHLLEILILRD 258
GF KLK+VDFSTSYSITG+FLRNLGS T G+LLE+L+LRD
Sbjct: 358 RIVGLRHRGEFLIVSALVCMGFHKLKYVDFSTSYSITGTFLRNLGSSTGGNLLEVLLLRD 417
Query: 257 CMHLKEVEVARFLTAILAGDFKFLRHLDISNREGLASESDWDARCYSPSIILPVKRVLEE 78
CMHLKEVEVA+FL+AI+AGDF+ LR LDISNREGLASE DW RCY+ S+I P+K+V EE
Sbjct: 418 CMHLKEVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMI-PIKQVSEE 476
Query: 77 RPEITLLAEFPPEGSFIEMEQIMN 6
RP+I LLAEFP EGS IE+EQ+++
Sbjct: 477 RPDICLLAEFPSEGSIIEIEQMID 500
>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
gi|223540114|gb|EEF41691.1| conserved hypothetical
protein [Ricinus communis]
Length = 515
Score = 577 bits (1486), Expect = e-162
Identities = 304/474 (64%), Positives = 365/474 (77%), Gaps = 1/474 (0%)
Frame = -2
Query: 1421 MDTLVLLYPSVPKRPCLEPHXXXXXXXSRAPPKTEEKNMESFLETFLGLFNNNNDTSSID 1242
MDTL+ S+ KRPC + ++ L+TFL L ++ + SID
Sbjct: 1 MDTLLHTPTSMAKRPC-----PFTAATASTAVAMNNHQVDGLLQTFLDLADS--PSLSID 53
Query: 1241 ESLERLIEMKTNDCDQNQLIESALELGSVLLEAGKKLQRKRFSKHNSMAWVLPPDLTIKV 1062
SLE L+E D DQ+ LI+ AL+LGS+LLEAG + RKR SKHNS+ WVLPPDLTIKV
Sbjct: 54 LSLEHLLESSPCDSDQSVLIDRALKLGSILLEAGNRSSRKRSSKHNSLTWVLPPDLTIKV 113
Query: 1061 FSLLDTQSLCYASATCSMFNKCAMDPLCYSNIDLTSVVPKINNTVVNTMIRRADRKLQSL 882
FS+LDTQSLCYA+ATCSMF+KCAMDPLCY+NIDLT+VVPK+NN VV+TMI+RA + LQSL
Sbjct: 114 FSMLDTQSLCYAAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKSLQSL 173
Query: 881 KLGIMXXXXXXXXXXXPMYYTIRNSVD-AGFSWNDRRSRQGKESYVLTRSCLMSLNMENG 705
KLGI+ + Y+IRNSVD + SWND+R+RQGKES +LTRSCL SL ++G
Sbjct: 174 KLGIVPGPTSSPGSCETLVYSIRNSVDVSNISWNDKRTRQGKESSILTRSCLYSLTGDSG 233
Query: 704 SSGPLLRRLHLYNIDRMDNTALCAALSSCPSLVDLEIVGLHVELRQTLESVSKNCRLLER 525
++G LL+RLHLYNI+RMDNT+L ALS+CPSL+DLEIVGLHVELRQTL SVS NC L+ER
Sbjct: 234 AAGTLLKRLHLYNIERMDNTSLYGALSACPSLLDLEIVGLHVELRQTLVSVSMNCPLIER 293
Query: 524 LFFESSRTGRDDSLKSPTCVDLVNGCPNMTSLALRGFKLQDYKARILLKGFRKLKFVDFS 345
LFFESS+TGRD+SLKSPTCVDLV CPN+TSLALRGFKL D K RIL+KGFRKLK+VDFS
Sbjct: 294 LFFESSKTGRDESLKSPTCVDLVTNCPNLTSLALRGFKLHDCKVRILVKGFRKLKYVDFS 353
Query: 344 TSYSITGSFLRNLGSGTNGHLLEILILRDCMHLKEVEVARFLTAILAGDFKFLRHLDISN 165
TSYSITG FLRNLG + G+LL EVEVAR LTA+L GDFK LRHLD+SN
Sbjct: 354 TSYSITGHFLRNLGGSSGGNLL------------EVEVARLLTAVLTGDFKSLRHLDVSN 401
Query: 164 REGLASESDWDARCYSPSIILPVKRVLEERPEITLLAEFPPEGSFIEMEQIMNS 3
REGLASESDW RCYS I PVK+VLE RP++ LLA+FPP+GSFI++EQ+++S
Sbjct: 402 REGLASESDWYHRCYSLRTI-PVKQVLEARPDMCLLADFPPDGSFIDVEQMIDS 454
>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
Length = 486
Score = 519 bits (1336), Expect = e-145
Identities = 283/475 (59%), Positives = 342/475 (72%), Gaps = 3/475 (0%)
Frame = -2
Query: 1421 MDTLVLLYPSVPKRPCLEPHXXXXXXXSRA--PPKTEEKNMESFLETFLGLFNNNNDTSS 1248
MDTL L PS+ KRPC+ + P ++ ME LE FL L +++ S
Sbjct: 1 MDTL-LEAPSMAKRPCVCANDPVLRHSHCCLNPRVSQSDQMEGLLEAFLELSDSSGP--S 57
Query: 1247 IDESLERLIEMKTNDCDQNQLIESALELGSVLLEAGKKLQRKRFSKHNSMAWVLPPDLTI 1068
+ S E+L++ + D DQN LI+ AL LGS LLEAGK+ RKR S HNS+ W LPPDLTI
Sbjct: 58 LHLSFEKLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTI 117
Query: 1067 KVFSLLDTQSLCYASATCSMFNKCAMDPLCYSNIDLTSVVPKINNTVVNTMIRRADRKLQ 888
KVFS+LDTQSLCY +ATCSMF+KCAMDPLCY+NIDLT+VVPK+NN VV+TMI+RA + LQ
Sbjct: 118 KVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQ 177
Query: 887 SLKLGIMXXXXXXXXXXXPMYYTIRNSVDA-GFSWNDRRSRQGKESYVLTRSCLMSLNME 711
SL+LGI+ P+ YTIRNSVDA GFSWND+RSRQGKES +L+RSCL +L+ +
Sbjct: 178 SLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDKRSRQGKESSILSRSCLTALSGD 237
Query: 710 NGSSGPLLRRLHLYNIDRMDNTALCAALSSCPSLVDLEIVGLHVELRQTLESVSKNCRLL 531
+G++G LL+RLHLYNI+RMDNTALCAALS+CPSL+DLEIVGLHVELRQTL SVS NC L+
Sbjct: 238 SGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLI 297
Query: 530 ERLFFESSRTGRDDSLKSPTCVDLVNGCPNMTSLALRGFKLQDYKARILLKGFRKLKFVD 351
ERLFFESS+TGRDDSLKSPTCVDLVN CP++TSLALRGFKL DYK RIL+K
Sbjct: 298 ERLFFESSKTGRDDSLKSPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVK--------- 348
Query: 350 FSTSYSITGSFLRNLGSGTNGHLLEILILRDCMHLKEVEVARFLTAILAGDFKFLRHLDI 171
VEVA+FL+AI+AGDF+ LR LDI
Sbjct: 349 -------------------------------------VEVAKFLSAIIAGDFRLLRLLDI 371
Query: 170 SNREGLASESDWDARCYSPSIILPVKRVLEERPEITLLAEFPPEGSFIEMEQIMN 6
SNREGLASE DW RCY+ S+I P+K+V EERP+I LLAEFP EGS IE+EQ+++
Sbjct: 372 SNREGLASEGDWYYRCYNSSMI-PIKQVSEERPDICLLAEFPSEGSIIEIEQMID 425
>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
predicted protein [Populus trichocarpa]
Length = 676
Score = 504 bits (1298), Expect = e-140
Identities = 277/475 (58%), Positives = 341/475 (71%), Gaps = 2/475 (0%)
Frame = -2
Query: 1421 MDTLVLLYPSVPKRPCLEPHXXXXXXXSRAPPKTEEKNMESFLETFLGLFNNNNDTSSID 1242
MDTL+ S+ KRPC P + + + L+TFL L ++++ SID
Sbjct: 1 MDTLLHTPTSMAKRPCPIPSSPSTPPPNPNKLPNMNNQVGNLLQTFLNLADSHS--LSID 58
Query: 1241 ESLERLIEMKTNDCDQNQLIESALELGSVLLEAGKKLQRKRFSKHNSMAWVLPPDLTIKV 1062
+S E L++ D DQ+ LI+ AL+LGS+LLEAG + RKR S HNS+ W LPPDLTIK+
Sbjct: 59 QSFEHLLDSSPCDADQSLLIDRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDLTIKL 118
Query: 1061 FSLLDTQSLCYASATCSMFNKCAMDPLCYSNIDLTSVVPKINNTVVNTMIRRADRKLQSL 882
FS+LD QSLCYA+ATCSMF KCAMDPLCY+NIDLT+VVPK+NN VV+TMI+RA + L+SL
Sbjct: 119 FSMLDAQSLCYAAATCSMFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALRSL 178
Query: 881 KLGIMXXXXXXXXXXXPMYYTIRNSVD-AGFSWNDRRSRQGKESYVLTRSCLMSLNMENG 705
KLGI+ P+ Y IRN+V+ + FSWND+++RQGKES LTR CL L+ ENG
Sbjct: 179 KLGIVPGPTLPHGSCQPLVYGIRNAVEVSNFSWNDKKTRQGKESSTLTRYCLTPLSGENG 238
Query: 704 SSGPLLRRLHLYNIDRMDNTALCAALSSCPSLVDLEIVGLHVELRQTLESVSKNCRLLER 525
++G +LR LHLYNI+R+DNT+LC ALS+CPSL+DLEI+GLHV+LRQTL SVS NC L+ER
Sbjct: 239 AAGAVLRGLHLYNIERIDNTSLCGALSACPSLLDLEIIGLHVDLRQTLVSVSMNCPLIER 298
Query: 524 LFFESSRTGRDDSLKSPTCVDLVNGCPNMTSLALRGFKLQDYKARILLKGFRKLKFVDFS 345
LFFESS+TGRDDSLKS TCVDLVN CPN+TSLALRGFKL DYK RIL+KGF KLK+VDFS
Sbjct: 299 LFFESSKTGRDDSLKSSTCVDLVNNCPNLTSLALRGFKLYDYKLRILVKGFCKLKYVDFS 358
Query: 344 TSYSITGSFLRNLGSGTNGHLLEILILRDCMHLKEVEVARFLTAILAGDFKFLRHL-DIS 168
TSYSITGSFL + LL+ +L L G F L DIS
Sbjct: 359 TSYSITGSFL-------SWKLLD-----------------YLHQFLLGTLDFFDILWDIS 394
Query: 167 NREGLASESDWDARCYSPSIILPVKRVLEERPEITLLAEFPPEGSFIEMEQIMNS 3
NREGLA+ D RCYS SII P K+VLEERP+I LLAEFP EGSF+++ Q+ +S
Sbjct: 395 NREGLAAAGDSYGRCYSLSII-PTKQVLEERPDICLLAEFPSEGSFVDLGQMTDS 448