BLASTX nr result

ID: Coptis23_contig00009718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009718
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADQ43191.1| NADH-ubiquinone oxidoreductase B18 [Eutrema parvu...   164   9e-39
gb|ACQ90599.1| putative NADH dehydrogenase [Eutrema halophilum]       164   9e-39
ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-36
ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|1...   155   4e-36
ref|XP_002875109.1| hypothetical protein ARALYDRAFT_484128 [Arab...   155   5e-36

>gb|ADQ43191.1| NADH-ubiquinone oxidoreductase B18 [Eutrema parvulum]
          Length = 102

 Score =  164 bits (416), Expect = 9e-39
 Identities = 79/101 (78%), Positives = 82/101 (81%)
 Frame = +2

Query: 74  MEVEGSSKKMIATQEEMVEAKVPISYRDQCAHLLIPLNKCRSKEFFLPWKCEDERHVYEK 253
           MEV GSSKKMIATQEEMV AKVP+ YRDQCAHLLIPLNKCR  EFFLPWKCEDERHVYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVAAKVPLGYRDQCAHLLIPLNKCRQAEFFLPWKCEDERHVYEK 60

Query: 254 CEYELVMERMLMMKKIRESXXXXXXXXXXGAGIPLIPSTAN 376
           CEYELVMERML M+KIRE           G G+PLIP TAN
Sbjct: 61  CEYELVMERMLAMQKIREEEAKAKQNKLQGNGVPLIPKTAN 101


>gb|ACQ90599.1| putative NADH dehydrogenase [Eutrema halophilum]
          Length = 102

 Score =  164 bits (416), Expect = 9e-39
 Identities = 79/101 (78%), Positives = 82/101 (81%)
 Frame = +2

Query: 74  MEVEGSSKKMIATQEEMVEAKVPISYRDQCAHLLIPLNKCRSKEFFLPWKCEDERHVYEK 253
           MEV GSSKKMIATQEEMV AKVP+ YRDQCAHLLIPLNKCR  EFFLPWKCEDERHVYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVAAKVPLGYRDQCAHLLIPLNKCRQAEFFLPWKCEDERHVYEK 60

Query: 254 CEYELVMERMLMMKKIRESXXXXXXXXXXGAGIPLIPSTAN 376
           CEYELVMERML M+KIRE           G G+PLIP TAN
Sbjct: 61  CEYELVMERMLAMQKIREEEAKAKQNKVQGNGVPLIPKTAN 101


>ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|222864872|gb|EEF02003.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  156 bits (394), Expect = 3e-36
 Identities = 77/101 (76%), Positives = 82/101 (81%)
 Frame = +2

Query: 74  MEVEGSSKKMIATQEEMVEAKVPISYRDQCAHLLIPLNKCRSKEFFLPWKCEDERHVYEK 253
           ME+ GSSK MIATQEEMVEA+VPI YRDQCAHLLIPLNKCR  EFFLPWKCE+ERHVYEK
Sbjct: 1   MELPGSSKPMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQSEFFLPWKCENERHVYEK 60

Query: 254 CEYELVMERMLMMKKIRESXXXXXXXXXXGAGIPLIPSTAN 376
           CEYELVMERML M+KIRE+          G  IPLIP TAN
Sbjct: 61  CEYELVMERMLQMQKIREAEAKLKQSHKQGT-IPLIPKTAN 100


>ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|118482879|gb|ABK93354.1|
           unknown [Populus trichocarpa]
           gi|222851378|gb|EEE88925.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score =  155 bits (393), Expect = 4e-36
 Identities = 77/101 (76%), Positives = 81/101 (80%)
 Frame = +2

Query: 74  MEVEGSSKKMIATQEEMVEAKVPISYRDQCAHLLIPLNKCRSKEFFLPWKCEDERHVYEK 253
           MEV GSSK MIATQEEMVEA+VPI YRDQCAHLLIPLNKCR  EFFLPWKCE ERH+YEK
Sbjct: 1   MEVPGSSKPMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRHAEFFLPWKCESERHIYEK 60

Query: 254 CEYELVMERMLMMKKIRESXXXXXXXXXXGAGIPLIPSTAN 376
           CEYELVMERML M+KIRE+          G  IPLIP TAN
Sbjct: 61  CEYELVMERMLQMQKIREAEAKLKQSHKQGT-IPLIPKTAN 100


>ref|XP_002875109.1| hypothetical protein ARALYDRAFT_484128 [Arabidopsis lyrata subsp.
           lyrata] gi|297320947|gb|EFH51368.1| hypothetical protein
           ARALYDRAFT_484128 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  155 bits (392), Expect = 5e-36
 Identities = 77/102 (75%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
 Frame = +2

Query: 74  MEVEGSSKKMIATQEEMVEAKVPISYRDQCAHLLIPLNKCRSKEFFLPWKCEDERHVYEK 253
           MEV GSSKKMIATQEEM  AK+P+  RDQCAHLLIPLNKCR  EFFLPWKCEDERHVYEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIPLGSRDQCAHLLIPLNKCRQAEFFLPWKCEDERHVYEK 60

Query: 254 CEYELVMERMLMMKKIRESXXXXXXXXXXG-AGIPLIPSTAN 376
           CEYELVMERML MKKIRE           G A +PLIP TAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102


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