BLASTX nr result

ID: Coptis23_contig00009716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009716
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320958.1| predicted protein [Populus trichocarpa] gi|2...   366   2e-99
ref|XP_002515233.1| conserved hypothetical protein [Ricinus comm...   355   3e-96
gb|ACA04033.1| galactinol synthase 4 [Populus trichocarpa x Popu...   355   4e-96
ref|XP_002301531.1| predicted protein [Populus trichocarpa] gi|2...   355   4e-96
ref|XP_002279136.2| PREDICTED: glycogenin-1 isoform 2 [Vitis vin...   348   5e-94

>ref|XP_002320958.1| predicted protein [Populus trichocarpa] gi|222861731|gb|EEE99273.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  366 bits (940), Expect = 2e-99
 Identities = 168/188 (89%), Positives = 180/188 (95%)
 Frame = -3

Query: 564 MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 385
           MAP +V AA K  GFTK  SLPS+A+VTFLAGNGDYVKGVVGLAKGLRKVK++YPL+VA+
Sbjct: 1   MAPELVQAALKPAGFTKPASLPSRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLIVAV 60

Query: 384 LPDVPEEHRRILETQGCIVREIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 205
           LPDVPEEHRRILE+QGCIVREIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61  LPDVPEEHRRILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 204 DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 25
           DGDIQV++NIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCP+KVNWPAEMGQP
Sbjct: 121 DGDIQVYDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVNWPAEMGQP 180

Query: 24  PALYFNAG 1
           P+LYFNAG
Sbjct: 181 PSLYFNAG 188


>ref|XP_002515233.1| conserved hypothetical protein [Ricinus communis]
           gi|223545713|gb|EEF47217.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score =  355 bits (912), Expect = 3e-96
 Identities = 162/188 (86%), Positives = 178/188 (94%)
 Frame = -3

Query: 564 MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 385
           MAP +V AA K   FTK  +LPS+A+VTFLAGNGDY+KGVVGLAKGLRKVK++YPLVVA+
Sbjct: 1   MAPELVHAALKPASFTKPPTLPSRAYVTFLAGNGDYIKGVVGLAKGLRKVKTAYPLVVAV 60

Query: 384 LPDVPEEHRRILETQGCIVREIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 205
           LPDVPEEHR+ILE+QGCIVREIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61  LPDVPEEHRKILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 204 DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 25
           DGDIQVF+NIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCP++V WPA++GQP
Sbjct: 121 DGDIQVFDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPDRVKWPAKLGQP 180

Query: 24  PALYFNAG 1
           P+LYFNAG
Sbjct: 181 PSLYFNAG 188


>gb|ACA04033.1| galactinol synthase 4 [Populus trichocarpa x Populus deltoides]
          Length = 337

 Score =  355 bits (911), Expect = 4e-96
 Identities = 163/188 (86%), Positives = 178/188 (94%)
 Frame = -3

Query: 564 MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 385
           MAP +V +A K  GFTK  SLPS+A+VTFLAG+GDYVKGVVGLAKGLRKVK++YPL+VA+
Sbjct: 1   MAPELVRSALKPAGFTKLASLPSRAYVTFLAGDGDYVKGVVGLAKGLRKVKTAYPLIVAV 60

Query: 384 LPDVPEEHRRILETQGCIVREIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 205
           LPDVPEEHR+ILE+QGCIVREIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61  LPDVPEEHRQILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 204 DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 25
           DGDIQV++NIDHLFDLPDG FYAVMDCFCEKTWSHTPQYKIGYCQQCP+KVNWPAEMGQP
Sbjct: 121 DGDIQVYDNIDHLFDLPDGRFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVNWPAEMGQP 180

Query: 24  PALYFNAG 1
           P+ YFNAG
Sbjct: 181 PSPYFNAG 188


>ref|XP_002301531.1| predicted protein [Populus trichocarpa] gi|222843257|gb|EEE80804.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  355 bits (911), Expect = 4e-96
 Identities = 163/188 (86%), Positives = 178/188 (94%)
 Frame = -3

Query: 564 MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 385
           MAP +V +A K  GFTK  SLPS+A+VTFLAG+GDYVKGVVGLAKGLRKVK++YPL+VA+
Sbjct: 1   MAPELVRSALKPAGFTKLASLPSRAYVTFLAGDGDYVKGVVGLAKGLRKVKTAYPLIVAV 60

Query: 384 LPDVPEEHRRILETQGCIVREIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 205
           LPDVPEEHR+ILE+QGCIVREIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61  LPDVPEEHRQILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 204 DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 25
           DGDIQV++NIDHLFDLPDG FYAVMDCFCEKTWSHTPQYKIGYCQQCP+KVNWPAEMGQP
Sbjct: 121 DGDIQVYDNIDHLFDLPDGRFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVNWPAEMGQP 180

Query: 24  PALYFNAG 1
           P+ YFNAG
Sbjct: 181 PSPYFNAG 188


>ref|XP_002279136.2| PREDICTED: glycogenin-1 isoform 2 [Vitis vinifera]
          Length = 330

 Score =  348 bits (893), Expect = 5e-94
 Identities = 161/188 (85%), Positives = 173/188 (92%)
 Frame = -3

Query: 564 MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 385
           MAP I+SA+ K   F K  SLP +A+V FLAGNGDYVKGVVGLAKGLRKVKS+YPLVVA+
Sbjct: 1   MAPEIISASGKPSRFLKPASLPDRAYVAFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAV 60

Query: 384 LPDVPEEHRRILETQGCIVREIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 205
           LPDVP EHRR LE+QGCIVREIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61  LPDVPVEHRRELESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 204 DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 25
           DGDIQV++NIDHLF+LPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCP KV WPAE+GQP
Sbjct: 121 DGDIQVYDNIDHLFELPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPEKVQWPAELGQP 180

Query: 24  PALYFNAG 1
           P+LYFNAG
Sbjct: 181 PSLYFNAG 188


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