BLASTX nr result

ID: Coptis23_contig00009709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009709
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|2235...   390   e-106
ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max]       382   e-104
emb|CBI32852.3| unnamed protein product [Vitis vinifera]              382   e-103

>ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|222867210|gb|EEF04341.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  402 bits (1034), Expect = e-110
 Identities = 202/311 (64%), Positives = 239/311 (76%), Gaps = 6/311 (1%)
 Frame = -2

Query: 1106 MEMGKKRMAILVGCNYPNSPNELHGCINDVLSMHDTLVSRFGFEPKNIEVLTDAPDSLVM 927
            MEMGKKRMA+LVGCNYPN+ NELHGCINDVL+M + LV RFGF+  ++++LTDAP S+V+
Sbjct: 1    MEMGKKRMAVLVGCNYPNTQNELHGCINDVLAMKEVLVKRFGFDASHVQLLTDAPGSVVL 60

Query: 926  PTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLITDV 756
            PTGANI +AL  MIDQAE GDVL+FHYSGHGT +PS    H    DEAIVPCD NLITDV
Sbjct: 61   PTGANIKRALGHMIDQAEAGDVLFFHYSGHGTWIPSNKPGHAFRQDEAIVPCDFNLITDV 120

Query: 755  DFRRLVNRLPEKSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXSC--PKTIPIDN 582
            DFR+LVNRLP+ +S TI+SDSCHSGGLIDKEKEQIGP               PK IP ++
Sbjct: 121  DFRQLVNRLPKGASLTILSDSCHSGGLIDKEKEQIGPNATITANNTAVHSHNPKAIPFES 180

Query: 581  ILDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNE 402
            IL HLTSL+ I + D+G HL + FG++AS KY    ++  L   + PD GILLSGCQ+NE
Sbjct: 181  ILQHLTSLTNINTSDVGTHLLEFFGSDASLKYRLPPLEWDLFDSLKPDEGILLSGCQANE 240

Query: 401  TSADMNPTLEEGGKAYGAFSNAIQMILKEHGTSLSNRELVTKTRELLQAQGF-YQHPCLY 225
            TSADM+P  E GGKAYGAFSNA+QM+LK+H   LSN++LVT  RE+LQAQGF  QHPCLY
Sbjct: 241  TSADMSP-YEGGGKAYGAFSNAVQMVLKQHSGQLSNKQLVTMAREVLQAQGFEQQHPCLY 299

Query: 224  CSDDNADAPFL 192
            CSD NA A FL
Sbjct: 300  CSDQNAIATFL 310


>ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|222853910|gb|EEE91457.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  398 bits (1023), Expect = e-108
 Identities = 200/311 (64%), Positives = 240/311 (77%), Gaps = 6/311 (1%)
 Frame = -2

Query: 1106 MEMGKKRMAILVGCNYPNSPNELHGCINDVLSMHDTLVSRFGFEPKNIEVLTDAPDSLVM 927
            M+MG KRMA+LVGCNYPN+ NELHGCINDVL+M + LV RFGF+ +++++LTDAP S+V+
Sbjct: 1    MDMGNKRMAVLVGCNYPNTRNELHGCINDVLTMKEVLVKRFGFDLRSVQLLTDAPGSVVL 60

Query: 926  PTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDV 756
            PTGANI KAL+ MIDQAE GDVL+FHYSGHGTR+PS    H   HDEAIVPCD NLITDV
Sbjct: 61   PTGANIKKALSHMIDQAEAGDVLFFHYSGHGTRIPSVKRGHPFRHDEAIVPCDFNLITDV 120

Query: 755  DFRRLVNRLPEKSSFTIISDSCHSGGLIDKEKEQIGP--XXXXXXXXXXXSCPKTIPIDN 582
            DFR+LVNRLP+ +S T++SDSCHSGGLIDKEKEQIGP               PK IP ++
Sbjct: 121  DFRQLVNRLPKGASLTVLSDSCHSGGLIDKEKEQIGPKATITTNNAKVPSQSPKVIPFES 180

Query: 581  ILDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNE 402
            IL HLTSL+ I + DIG HL + FG++AS K+    ++      I+PD GILLSGCQ+NE
Sbjct: 181  ILQHLTSLTNINTSDIGTHLLEFFGSDASLKFRLPPLERDQFESINPDEGILLSGCQANE 240

Query: 401  TSADMNPTLEEGGKAYGAFSNAIQMILKEHGTSLSNRELVTKTRELLQAQGF-YQHPCLY 225
            TSADM+P  E GGK+YGAFSNA+QM+LKEH   LSN++LV   RE+LQAQGF  QHPCLY
Sbjct: 241  TSADMSPN-EGGGKSYGAFSNAVQMVLKEHLGQLSNKQLVMMAREVLQAQGFEQQHPCLY 299

Query: 224  CSDDNADAPFL 192
            CSD NA   FL
Sbjct: 300  CSDQNAGTTFL 310


>ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|223543463|gb|EEF44994.1|
            caspase, putative [Ricinus communis]
          Length = 325

 Score =  390 bits (1003), Expect = e-106
 Identities = 202/316 (63%), Positives = 239/316 (75%), Gaps = 11/316 (3%)
 Frame = -2

Query: 1106 MEMGKKRMAILVGCNYPNSPNELHGCINDVLSMHDTLVSRFGFEPKNIEVLTDAP---DS 936
            ME GKKRMA+LVGCNYPNS NELHGCINDV++M D LV RFGF+  +IE+LTDAP    S
Sbjct: 1    MEKGKKRMAVLVGCNYPNSRNELHGCINDVVTMRDVLVKRFGFDLSHIELLTDAPAPGSS 60

Query: 935  LVMPTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLI 765
             +MPTGANI KAL++M+ +AE GDVL FHYSGHGT++PSK   H    DEAIVPCD NLI
Sbjct: 61   QIMPTGANIKKALDQMVGKAESGDVLLFHYSGHGTKIPSKRPGHPFRQDEAIVPCDFNLI 120

Query: 764  TDVDFRRLVNRLPEKSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXSC----PKT 597
            TDVDFR+LVNRLP+ +SFTIISDSCHSGGLIDKEKEQIGP           S     PK 
Sbjct: 121  TDVDFRQLVNRLPKGTSFTIISDSCHSGGLIDKEKEQIGPNSTITANAENLSSHIHTPKH 180

Query: 596  IPIDNILDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSG 417
            IP ++IL H +SL+GI + DIG HL + FG +AS K+    ++  L   + PD GILLSG
Sbjct: 181  IPFNSILQHFSSLTGINTSDIGTHLLEYFGADASLKFRLQSLEQDLFESLKPDDGILLSG 240

Query: 416  CQSNETSADMNPTLEEGGKAYGAFSNAIQMILKEHGTSL-SNRELVTKTRELLQAQGFYQ 240
            CQ+NETSADMNP  E  G+AYGAFSNA+QM+LKE+   + SNRE+V   R++L+AQGF Q
Sbjct: 241  CQANETSADMNPGGEGRGQAYGAFSNAVQMVLKENPDQIFSNREVVMMARKVLEAQGFEQ 300

Query: 239  HPCLYCSDDNADAPFL 192
            HPCLYCSD NADA FL
Sbjct: 301  HPCLYCSDKNADAAFL 316


>ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max]
          Length = 322

 Score =  382 bits (981), Expect = e-104
 Identities = 189/309 (61%), Positives = 234/309 (75%), Gaps = 7/309 (2%)
 Frame = -2

Query: 1091 KRMAILVGCNYPNSPNELHGCINDVLSMHDTLVSRFGFEPKNIEVLTDAPDSL-VMPTGA 915
            KR+A+LVGCNYPN+ NELHGCINDVL+M DTL  RFGF+P NIE+LTDAP S   +PTGA
Sbjct: 10   KRVAVLVGCNYPNTSNELHGCINDVLAMKDTLEKRFGFDPSNIELLTDAPHSSNKLPTGA 69

Query: 914  NIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLITDVDFRR 744
            NI +AL  M+D AE GDVLYFHYSGHGTR+PSK   H   H+EAIVPCD NLITD+D R+
Sbjct: 70   NIKEALANMVDGAEAGDVLYFHYSGHGTRIPSKKHGHPFRHEEAIVPCDFNLITDLDLRQ 129

Query: 743  LVNRLPEKSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXSC---PKTIPIDNILD 573
            LVNR+P+ +S TI+SDSCHSGGLIDKEKEQIGP                PK IP ++I+ 
Sbjct: 130  LVNRVPKGASLTILSDSCHSGGLIDKEKEQIGPSSSTEKDSTSKPSCSTPKAIPFESIMQ 189

Query: 572  HLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNETSA 393
             L+ L+ + + DIG HL ++FG+EAS ++      L L  P+ PD GILLSGCQ++ETSA
Sbjct: 190  QLSWLTKVNTTDIGTHLLELFGSEASLRFRIPAPDLDLLEPLRPDEGILLSGCQADETSA 249

Query: 392  DMNPTLEEGGKAYGAFSNAIQMILKEHGTSLSNRELVTKTRELLQAQGFYQHPCLYCSDD 213
            DMNP +  G KAYGAFSNA++M+L+E+   LSNR+LV + R+ L+ QGF QHPCLYCSD+
Sbjct: 250  DMNPNVACGQKAYGAFSNAVEMVLRENSPLLSNRDLVIRARKKLETQGFQQHPCLYCSDE 309

Query: 212  NADAPFLCK 186
            NA+A FLC+
Sbjct: 310  NANASFLCE 318


>emb|CBI32852.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  382 bits (980), Expect = e-103
 Identities = 195/317 (61%), Positives = 236/317 (74%), Gaps = 4/317 (1%)
 Frame = -2

Query: 1106 MEMGKKRMAILVGCNYPNSPNELHGCINDVLSMHDTLVSRFGFEPKNIEVLTDAPDSLVM 927
            ME GKKRMA+LVGCNY N+ NELHGCINDVL+M +TLV+RFGF+  ++E+LTD P SLVM
Sbjct: 1    MEEGKKRMAVLVGCNYHNTRNELHGCINDVLTMRETLVTRFGFQLSHVELLTDEPGSLVM 60

Query: 926  PTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDV 756
            PTGANI KAL+RM+DQAEPGDVL+FHYSGHGT++PS    H    DEAIVPCD NLITD+
Sbjct: 61   PTGANIKKALDRMVDQAEPGDVLFFHYSGHGTKIPSVKPHHPFSQDEAIVPCDFNLITDI 120

Query: 755  DFRRLVNRLPEKSSFTIISDSCHSGGLIDKEKEQIGP-XXXXXXXXXXXSCPKTIPIDNI 579
            DFR+LV+R+P+ ++FTI+SDSCHSGGLIDKEKEQIGP              PK IP + I
Sbjct: 121  DFRQLVDRIPKGANFTILSDSCHSGGLIDKEKEQIGPSSVNFTSTTFPSQKPKMIPFEAI 180

Query: 578  LDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNET 399
              HL+SL+ I + DIG HL   FG +AS K+      L     +  D+GILLSGCQ+NET
Sbjct: 181  QQHLSSLTSINTSDIGTHLLVHFGGDASLKFRLPPTALDWFESLRSDAGILLSGCQANET 240

Query: 398  SADMNPTLEEGGKAYGAFSNAIQMILKEHGTSLSNRELVTKTRELLQAQGFYQHPCLYCS 219
            SADMNP +  G KAYGAFSNA+Q + K+    LSN+E+V   R+ LQAQ F QHPCLYCS
Sbjct: 241  SADMNPMM-TGEKAYGAFSNAVQTVFKQQSGKLSNKEVVMLARKALQAQHFEQHPCLYCS 299

Query: 218  DDNADAPFLCKT*QGPS 168
            D+N DA FL +  +GPS
Sbjct: 300  DENVDATFLWQP-KGPS 315


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