BLASTX nr result

ID: Coptis23_contig00009694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009694
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   152   1e-64
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              152   1e-64
ref|XP_004139565.1| PREDICTED: protein argonaute 5-like [Cucumis...   150   3e-64
ref|XP_004167325.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...   150   5e-64
ref|XP_002523757.1| eukaryotic translation initiation factor 2c,...   135   4e-61

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
            vinifera]
          Length = 1038

 Score =  152 bits (383), Expect(2) = 1e-64
 Identities = 79/139 (56%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414  CVSISHF*TRNLPGYFFHGLVSMCNSKGMSINPTSLLPMRSTWSDQIERTLIEAHTQSAS 235
            C++ S    ++LP  F   LV+MC SKGM  NP  LLP++S   +QIE+ L++ H QS +
Sbjct: 606  CLNFSFRVHQDLPSGFCRELVNMCVSKGMVFNPNPLLPIQSAHPNQIEKVLVDVHKQSMA 665

Query: 234  KIAS-SXXXXXXXXXXXXLPDLTGSYGQIKRICKTELGIISQCCQPKQAIKCNKQYLENV 58
            K+AS              LPD+TGSYG+IKRIC+TELGI+SQCCQP QA K NKQY ENV
Sbjct: 666  KLASMGQNGKQLQLLIIILPDVTGSYGKIKRICETELGIVSQCCQPSQASKLNKQYFENV 725

Query: 57   ALKINVKAGGRNTVLMDAL 1
            ALKINVK GGRNTVL DA+
Sbjct: 726  ALKINVKVGGRNTVLFDAI 744



 Score =  120 bits (302), Expect(2) = 1e-64
 Identities = 56/101 (55%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = -3

Query: 694 VTNMLRASCQRPKQREDNIKTMALHNDYKND-VFAKEFGIEVIPQLVVIQNARVLPAPML 518
           VT +LRA+CQRP +RE NI+ M   N++  D V   EFGI +  +L ++ +ARVLP PML
Sbjct: 512 VTALLRATCQRPSEREGNIQEMVRKNNFSTDRVVRDEFGIRINEELTLV-DARVLPPPML 570

Query: 517 KYRDTGRDVRLQPRMGQWNMINAKMVNGGTINHWMCINFSF 395
           KY D+GR+ ++ PR+GQWNMI+ KMVNGGT+  W C+NFSF
Sbjct: 571 KYHDSGREAKVDPRVGQWNMIDKKMVNGGTVQFWTCLNFSF 611


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  152 bits (383), Expect(2) = 1e-64
 Identities = 79/139 (56%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414  CVSISHF*TRNLPGYFFHGLVSMCNSKGMSINPTSLLPMRSTWSDQIERTLIEAHTQSAS 235
            C++ S    ++LP  F   LV+MC SKGM  NP  LLP++S   +QIE+ L++ H QS +
Sbjct: 600  CLNFSFRVHQDLPSGFCRELVNMCVSKGMVFNPNPLLPIQSAHPNQIEKVLVDVHKQSMA 659

Query: 234  KIAS-SXXXXXXXXXXXXLPDLTGSYGQIKRICKTELGIISQCCQPKQAIKCNKQYLENV 58
            K+AS              LPD+TGSYG+IKRIC+TELGI+SQCCQP QA K NKQY ENV
Sbjct: 660  KLASMGQNGKQLQLLIIILPDVTGSYGKIKRICETELGIVSQCCQPSQASKLNKQYFENV 719

Query: 57   ALKINVKAGGRNTVLMDAL 1
            ALKINVK GGRNTVL DA+
Sbjct: 720  ALKINVKVGGRNTVLFDAI 738



 Score =  120 bits (302), Expect(2) = 1e-64
 Identities = 56/101 (55%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = -3

Query: 694 VTNMLRASCQRPKQREDNIKTMALHNDYKND-VFAKEFGIEVIPQLVVIQNARVLPAPML 518
           VT +LRA+CQRP +RE NI+ M   N++  D V   EFGI +  +L ++ +ARVLP PML
Sbjct: 506 VTALLRATCQRPSEREGNIQEMVRKNNFSTDRVVRDEFGIRINEELTLV-DARVLPPPML 564

Query: 517 KYRDTGRDVRLQPRMGQWNMINAKMVNGGTINHWMCINFSF 395
           KY D+GR+ ++ PR+GQWNMI+ KMVNGGT+  W C+NFSF
Sbjct: 565 KYHDSGREAKVDPRVGQWNMIDKKMVNGGTVQFWTCLNFSF 605


>ref|XP_004139565.1| PREDICTED: protein argonaute 5-like [Cucumis sativus]
          Length = 987

 Score =  150 bits (378), Expect(2) = 3e-64
 Identities = 77/139 (55%), Positives = 93/139 (66%)
 Frame = -1

Query: 417 GCVSISHF*TRNLPGYFFHGLVSMCNSKGMSINPTSLLPMRSTWSDQIERTLIEAHTQSA 238
           GCV+ S      LP  F H LVSMCNSKGM  NPT L P+R+  ++QI+  L + H+QS 
Sbjct: 556 GCVNFSSRLDPGLPSEFCHQLVSMCNSKGMVFNPTPLFPVRNAHANQIDGALGDIHSQSL 615

Query: 237 SKIASSXXXXXXXXXXXXLPDLTGSYGQIKRICKTELGIISQCCQPKQAIKCNKQYLENV 58
             +                PD++GSYG+IKRIC+TELGI+SQCCQP+QA K NKQY ENV
Sbjct: 616 KSLGPQGKSLQLLIIIL--PDISGSYGKIKRICETELGIVSQCCQPRQAQKLNKQYFENV 673

Query: 57  ALKINVKAGGRNTVLMDAL 1
           ALKINVK GGRN VL DA+
Sbjct: 674 ALKINVKVGGRNNVLNDAI 692



 Score =  121 bits (304), Expect(2) = 3e-64
 Identities = 55/99 (55%), Positives = 70/99 (70%)
 Frame = -3

Query: 694 VTNMLRASCQRPKQREDNIKTMALHNDYKNDVFAKEFGIEVIPQLVVIQNARVLPAPMLK 515
           VT MLRA+CQRP  RED+I  M    D+  D    +FGI V+   +    ARVLP+PMLK
Sbjct: 463 VTQMLRATCQRPPNREDSIGKMIGKIDHSKDDIVNDFGINVVSSRLCDVGARVLPSPMLK 522

Query: 514 YRDTGRDVRLQPRMGQWNMINAKMVNGGTINHWMCINFS 398
           Y DTG++ R+ PRMGQWNMIN KM+NGG +++W C+NFS
Sbjct: 523 YHDTGKESRVDPRMGQWNMINKKMINGGRVDYWGCVNFS 561


>ref|XP_004167325.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Cucumis
           sativus]
          Length = 984

 Score =  150 bits (378), Expect(2) = 5e-64
 Identities = 77/139 (55%), Positives = 93/139 (66%)
 Frame = -1

Query: 417 GCVSISHF*TRNLPGYFFHGLVSMCNSKGMSINPTSLLPMRSTWSDQIERTLIEAHTQSA 238
           GCV+ S      LP  F H LVSMCNSKGM  NPT L P+R+  ++QI+  L + H+QS 
Sbjct: 561 GCVNFSSRLDPGLPSEFCHQLVSMCNSKGMVFNPTPLFPVRNAHANQIDGALGDIHSQSL 620

Query: 237 SKIASSXXXXXXXXXXXXLPDLTGSYGQIKRICKTELGIISQCCQPKQAIKCNKQYLENV 58
             +                PD++GSYG+IKRIC+TELGI+SQCCQP+QA K NKQY ENV
Sbjct: 621 KSLGPQGKSLQLLIIIL--PDISGSYGKIKRICETELGIVSQCCQPRQAQKLNKQYFENV 678

Query: 57  ALKINVKAGGRNTVLMDAL 1
           ALKINVK GGRN VL DA+
Sbjct: 679 ALKINVKVGGRNNVLNDAI 697



 Score =  120 bits (302), Expect(2) = 5e-64
 Identities = 55/99 (55%), Positives = 69/99 (69%)
 Frame = -3

Query: 694 VTNMLRASCQRPKQREDNIKTMALHNDYKNDVFAKEFGIEVIPQLVVIQNARVLPAPMLK 515
           VT MLRA+CQRP  RED+I  M    D+  D    +FGI V+   +    ARVLP+PMLK
Sbjct: 468 VTEMLRATCQRPPNREDSIGKMIGKIDHSKDDIVNDFGINVVSSRLCDVGARVLPSPMLK 527

Query: 514 YRDTGRDVRLQPRMGQWNMINAKMVNGGTINHWMCINFS 398
           Y DTG + R+ PRMGQWNMIN KM+NGG +++W C+NFS
Sbjct: 528 YHDTGEESRVDPRMGQWNMINKKMINGGRVDYWGCVNFS 566


>ref|XP_002523757.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223537061|gb|EEF38697.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 987

 Score =  135 bits (341), Expect(2) = 4e-61
 Identities = 70/138 (50%), Positives = 89/138 (64%)
 Frame = -1

Query: 414 CVSISHF*TRNLPGYFFHGLVSMCNSKGMSINPTSLLPMRSTWSDQIERTLIEAHTQSAS 235
           CV+ S    R+LP  F   L+ MC SKGM+ NP  ++P+ S    QI +TL +   Q  +
Sbjct: 565 CVNFSLNINRDLPAEFCRQLIQMCVSKGMAFNPNPIIPISSAHPGQIGKTLNDIKRQCEA 624

Query: 234 KIASSXXXXXXXXXXXXLPDLTGSYGQIKRICKTELGIISQCCQPKQAIKCNKQYLENVA 55
           K+                PD++GSYG IKR+C+TELGI+SQCCQP+QA K +KQY ENVA
Sbjct: 625 KLVKQLQLLIIIL-----PDISGSYGIIKRVCETELGIVSQCCQPRQAAKLSKQYFENVA 679

Query: 54  LKINVKAGGRNTVLMDAL 1
           LKINVK GGRNTVL DA+
Sbjct: 680 LKINVKVGGRNTVLNDAV 697



 Score =  125 bits (314), Expect(2) = 4e-61
 Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = -3

Query: 694 VTNMLRASCQRPKQREDNIKTMALHNDYKNDVFAK-EFGIEVIPQLVVIQNARVLPAPML 518
           VT +LRA+CQRP +RE++IK M   N Y  DV  + EFGI+V  +L  + +ARVLPAPML
Sbjct: 471 VTALLRATCQRPHEREESIKQMVKRNSYNQDVLVRDEFGIQVKEELTFV-DARVLPAPML 529

Query: 517 KYRDTGRDVRLQPRMGQWNMINAKMVNGGTINHWMCINFS 398
            Y +TGR+ R+ PR GQWNMIN KMVNGG++N W C+NFS
Sbjct: 530 NYHETGRESRVDPRCGQWNMINKKMVNGGSVNFWTCVNFS 569


Top