BLASTX nr result

ID: Coptis23_contig00009664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009664
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B9GIE4.2|CSPL5_POPTR RecName: Full=CASP-like protein POPTRDRA...   166   1e-38
ref|XP_002529882.1| conserved hypothetical protein [Ricinus comm...   166   1e-38
ref|XP_002317067.1| predicted protein [Populus trichocarpa] gi|3...   160   3e-37
ref|XP_002300491.1| predicted protein [Populus trichocarpa] gi|2...   156   8e-36
gb|AAM64457.1| unknown [Arabidopsis thaliana]                         154   4e-35

>sp|B9GIE4.2|CSPL5_POPTR RecName: Full=CASP-like protein POPTRDRAFT_798217
          Length = 199

 Score =  166 bits (419), Expect = 1e-38
 Identities = 85/176 (48%), Positives = 111/176 (63%)
 Frame = -1

Query: 782 RSWIILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASVQAKFQHTPAFVFFV 603
           R W++L+LR+LA   T +AT+VM LNKE           TPIKAS+ AKFQHTPAFVFFV
Sbjct: 21  RKWVLLMLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLTAKFQHTPAFVFFV 80

Query: 602 IANSVGSLHNLLMLAVDLFGYKYDLKGVRLLTTTLLDMGTXXXXXXXXXXXXXXSELGKN 423
           IAN + S+HNL+M+  DLFG K D KG+RL    +LD+ T              +ELGKN
Sbjct: 81  IANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIMTVALVSGGVSAAAFMAELGKN 140

Query: 422 GNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHKKSKYQSAV 255
           GN+HARWNKICD+F T+CDH           ++ ++ ++V+SII L  K K  S +
Sbjct: 141 GNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKPDSTI 196


>ref|XP_002529882.1| conserved hypothetical protein [Ricinus communis]
           gi|288558966|sp|B9SV63.1|CSPLC_RICCO RecName:
           Full=CASP-like protein RCOM_0770240
           gi|223530609|gb|EEF32485.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  166 bits (419), Expect = 1e-38
 Identities = 86/190 (45%), Positives = 122/190 (64%), Gaps = 5/190 (2%)
 Frame = -1

Query: 833 MDVESAKPAEVVANKSA-----RSWIILVLRLLALCGTVSATLVMALNKEXXXXXXXXXX 669
           M + +A+  EV ++ S+     +SW++L+LR +A   T +AT+VMA N+E          
Sbjct: 1   MALVNAEKPEVGSSPSSLGPRNKSWVLLMLRFVAFLATAAATIVMAANRETKTFVVATIG 60

Query: 668 XTPIKASVQAKFQHTPAFVFFVIANSVGSLHNLLMLAVDLFGYKYDLKGVRLLTTTLLDM 489
            TPIKA+V AKFQHTPAFVFFVIAN +GS+HNL+M+A D F  K+D KG+R +T  +LDM
Sbjct: 61  STPIKATVTAKFQHTPAFVFFVIANGMGSIHNLVMIAGDTFVRKFDYKGLRWVTVAILDM 120

Query: 488 GTXXXXXXXXXXXXXXSELGKNGNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMAL 309
            T              +ELGKNGN+HA+WNKICDRFG++CDH           ++ ++ +
Sbjct: 121 LTAALISGGVNAAVFMAELGKNGNSHAKWNKICDRFGSFCDHGGAAIIASFIGLLLMLVI 180

Query: 308 NVLSIIALHK 279
           +++SII L K
Sbjct: 181 SIISIIKLLK 190


>ref|XP_002317067.1| predicted protein [Populus trichocarpa]
           gi|341958555|sp|B9I0U9.1|CSPLB_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_823125
           gi|222860132|gb|EEE97679.1| predicted protein [Populus
           trichocarpa]
          Length = 195

 Score =  160 bits (406), Expect = 3e-37
 Identities = 82/175 (46%), Positives = 110/175 (62%)
 Frame = -1

Query: 782 RSWIILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASVQAKFQHTPAFVFFV 603
           + W++L++R++A   T +ATLVMALNKE           TPIK ++ AKFQHTPAFVFFV
Sbjct: 21  KKWVLLMVRVVAFLATAAATLVMALNKETKTLVVATVGNTPIKVTLTAKFQHTPAFVFFV 80

Query: 602 IANSVGSLHNLLMLAVDLFGYKYDLKGVRLLTTTLLDMGTXXXXXXXXXXXXXXSELGKN 423
           IAN + S HNLLM+ V+L G K D KG+RL    +LDM T              +ELGKN
Sbjct: 81  IANGMASFHNLLMIMVELCGQKLDYKGMRLAMVAILDMMTVALVSGGASAATFMAELGKN 140

Query: 422 GNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHKKSKYQSA 258
           GN+HARW+KICD+F T+CDH           ++ +M ++V+SI+ L  K K  S+
Sbjct: 141 GNSHARWDKICDKFETFCDHGGAALIASSAGLILMMIISVMSIMKLLIKPKSDSS 195


>ref|XP_002300491.1| predicted protein [Populus trichocarpa] gi|222847749|gb|EEE85296.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  156 bits (394), Expect = 8e-36
 Identities = 82/170 (48%), Positives = 106/170 (62%)
 Frame = -1

Query: 764 VLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASVQAKFQHTPAFVFFVIANSVG 585
           +LR+LA   T +AT+VM LNKE           TPIKAS+ AKFQHTPAFVFFVIAN + 
Sbjct: 1   MLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLTAKFQHTPAFVFFVIANGLA 60

Query: 584 SLHNLLMLAVDLFGYKYDLKGVRLLTTTLLDMGTXXXXXXXXXXXXXXSELGKNGNTHAR 405
           S+HNL+M+  DLFG K D KG+RL    +LD+ T              +ELGKNGN+HAR
Sbjct: 61  SIHNLVMIMGDLFGQKLDYKGLRLAMIAILDIMTVALVSGGVSAAAFMAELGKNGNSHAR 120

Query: 404 WNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALHKKSKYQSAV 255
           WNKICD+F T+CDH           ++ ++ ++V+SII L  K K  S +
Sbjct: 121 WNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKPDSTI 170


>gb|AAM64457.1| unknown [Arabidopsis thaliana]
          Length = 197

 Score =  154 bits (388), Expect = 4e-35
 Identities = 83/190 (43%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
 Frame = -1

Query: 818 AKPAEVVANKSARSW-IILVLRLLALCGTVSATLVMALNKEXXXXXXXXXXXTPIKASVQ 642
           A+   VVA  + +SW ++L LR+ A   T++A +VM+LNKE            PIKA++ 
Sbjct: 2   AREKIVVAGGTTKSWKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLT 61

Query: 641 AKFQHTPAFVFFVIANSVGSLHNLLMLAVDLFGYKYDLKGVRLLTTTLLDMGTXXXXXXX 462
           AKFQHTPAFVFFVIAN + S HNLLM+A+ +F  K + KG+RLL+  +LDM         
Sbjct: 62  AKFQHTPAFVFFVIANVMVSFHNLLMIALQIFSPKLEYKGLRLLSIAILDMLNATLVSAA 121

Query: 461 XXXXXXXSELGKNGNTHARWNKICDRFGTYCDHXXXXXXXXXXXIVFLMALNVLSIIALH 282
                  +ELGKNGN HA+WNK+CDRF TYCDH           ++ ++ ++ +SI  L 
Sbjct: 122 ANAAVFVAELGKNGNKHAKWNKVCDRFATYCDHGAGAIIAAFAGVILMLLVSAVSISRLL 181

Query: 281 KKSKYQSAVA 252
             SK  S  A
Sbjct: 182 INSKNFSTTA 191


Top