BLASTX nr result
ID: Coptis23_contig00009640
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00009640
(1581 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 296 1e-77
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 291 3e-76
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2... 290 6e-76
gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ... 290 1e-75
ref|XP_004166610.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 289 1e-75
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 296 bits (758), Expect = 1e-77
Identities = 147/260 (56%), Positives = 193/260 (74%), Gaps = 1/260 (0%)
Frame = -1
Query: 1581 FVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKRAAAELN 1402
FVGGLD+DA E+DLRKVF +GE+ EVRL+ N ++KNKGFAF+RFATVEQAKRA EL
Sbjct: 235 FVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELK 294
Query: 1401 YTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIEDPKDRKR 1222
V GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+ED+ ++ED +
Sbjct: 295 NPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNEGM 354
Query: 1221 NRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQVKSVFLD 1042
NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IM+QVK+VF+D
Sbjct: 355 NRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQVKTVFID 414
Query: 1041 GLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCIDAVNKDG 862
GLPASWDE +V++ +KYGEIE ++LARNMPSAKRKDFGFV F T +AA+TC ++N
Sbjct: 415 GLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAE 474
Query: 861 IGD-VRKVFLRATLKRPLQR 805
+G+ K +RA L RPLQR
Sbjct: 475 LGEGENKAKVRARLSRPLQR 494
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 291 bits (746), Expect = 3e-76
Identities = 201/545 (36%), Positives = 274/545 (50%), Gaps = 46/545 (8%)
Frame = -1
Query: 1581 FVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKRAAAELN 1402
FVGGLD+DA E+DLRKVF +GE+ EVRL+ N ++KNKGFAF+RF+TVEQAK+A EL
Sbjct: 216 FVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKKAVTELK 275
Query: 1401 YTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIEDPKDRKR 1222
+ GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+EDV ++ED +
Sbjct: 276 NPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVEDSNNEGM 335
Query: 1221 NRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQVKSVFLD 1042
NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IM+QVK+VF+D
Sbjct: 336 NRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD 395
Query: 1041 GLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCIDAVNKDG 862
GLPASWDE +V++ +K+GEIE ++LARNMPSAKRKDFGFV F + +AA+TC ++N
Sbjct: 396 GLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKSINNAE 455
Query: 861 IGD-VRKVFLRATLKRPLQRRVPSAVGGWRGYDTDDYNGW-------------------S 742
+G+ K +RA L RPLQR G + D+ W
Sbjct: 456 LGEGDNKAKVRARLSRPLQR------GKGKHASRADFRSWYGGRTARGPWVRPVRGIASR 509
Query: 741 TRPSGIGRSYSNRENR----EVESFGRGHSPDHR-------IPGYNRYSTRGAVLETATS 595
P+ + R R+ R + GR P +R P Y + S +
Sbjct: 510 AAPTSVKRHVGLRDRRPPVMSMPVRGRPLPPPNRTYDRRAPAPSYPKSSLKRDYGRREEL 569
Query: 594 PIDIXXXXXXXXXXXSFETRYTPVEEYSSQFRRGSVRQAPTSATSHSRPRAPYFEXXXXX 415
P E R + ++YSS RGS TS S R Y +
Sbjct: 570 PPPRSRAPVDYSSRSVAERRQSYRDDYSS---RGSGYSDIPRGTSRSSARRAYVD----- 621
Query: 414 XXXXRNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXYENNSVDAYDYPTPSRLKRPYSAV 235
+ E P +Y A DY + S KRPYSA+
Sbjct: 622 DGYGQRLERHPPSYREGR-------------------------ARDYDSISGSKRPYSAM 656
Query: 234 DD--DRIVSRPLTRRSRSGGVDRDMG--------SYPVRVFSSFEEY-----SRSTQDVH 100
DD R R +D ++G +Y R+ S Y S S+QD H
Sbjct: 657 DDVPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDRIGRSSVGYGGSRSSLSSQDSH 716
Query: 99 HGYDS 85
Y S
Sbjct: 717 GLYTS 721
>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
predicted protein [Populus trichocarpa]
Length = 341
Score = 290 bits (743), Expect = 6e-76
Identities = 143/260 (55%), Positives = 192/260 (73%), Gaps = 1/260 (0%)
Frame = -1
Query: 1581 FVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKRAAAELN 1402
FVGGLD+DA E+DLRK+F +GE+ EVRL+ N ++KNKGFAF+RFATVEQAKRA EL
Sbjct: 35 FVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELK 94
Query: 1401 YTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIEDPKDRKR 1222
+ GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN++D+ ++ED +
Sbjct: 95 NPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVKDLTLVEDSNNAGM 154
Query: 1221 NRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQVKSVFLD 1042
NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IM+QVK+VF+D
Sbjct: 155 NRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFID 214
Query: 1041 GLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCIDAVNKDG 862
GLPASWDE +V+ +KYGEIE ++LARNMPSA+RKDFGFV F T +AA+TC ++N
Sbjct: 215 GLPASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDAAVTCAKSINNAE 274
Query: 861 IGD-VRKVFLRATLKRPLQR 805
+G+ K +RA L RPLQR
Sbjct: 275 LGEGDNKAKVRARLSRPLQR 294
>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
Length = 342
Score = 290 bits (741), Expect = 1e-75
Identities = 144/260 (55%), Positives = 190/260 (73%), Gaps = 1/260 (0%)
Frame = -1
Query: 1581 FVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKRAAAELN 1402
FVGGLD+DA E+DL+KVF +GE+ EVRL+ N ++KNKGFAF+RFATVEQAKRA EL
Sbjct: 34 FVGGLDKDATEDDLKKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTELK 93
Query: 1401 YTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIEDPKDRKR 1222
V GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+ED+ ++ED +
Sbjct: 94 NPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDSNNEGM 153
Query: 1221 NRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQVKSVFLD 1042
NRG+AFL FS DA+ A +LQ+ G A V+F S ++P ++IM+QVK+VF+D
Sbjct: 154 NRGFAFLEFSFRSDAMDAFKRLQEERCVFGVDRTAKVSFTDSFIDPGDEIMAQVKTVFID 213
Query: 1041 GLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCIDAVNKDG 862
GLPASWDE +V++ +KYGEIE ++LARNMPSAKRKDFGFV F T +AA+TC ++N
Sbjct: 214 GLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAE 273
Query: 861 IGD-VRKVFLRATLKRPLQR 805
+G+ K +RA L RPLQR
Sbjct: 274 LGEGENKAKVRARLSRPLQR 293
>ref|XP_004166610.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228505
[Cucumis sativus]
Length = 788
Score = 289 bits (740), Expect = 1e-75
Identities = 149/288 (51%), Positives = 199/288 (69%), Gaps = 4/288 (1%)
Frame = -1
Query: 1581 FVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKRAAAELN 1402
FVGGLD+D EEDL+KVF +GE+ EVRL+ N ++KNKGFAF+RFATVE+AKRA +EL
Sbjct: 233 FVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELK 292
Query: 1401 YTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIEDPKDRKR 1222
+ GK C VT + D++TL LGN+C TW KD L EKL+ Y ++N+ED+ ++ED +
Sbjct: 293 NPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGS 352
Query: 1221 NRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQVKSVFLD 1042
NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IM+QVK+VF+D
Sbjct: 353 NRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD 412
Query: 1041 GLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCIDAVNKDG 862
LPASWDE V+ +KYGEIE ++LARNMPSAKRKDFGFV F T +AA++C ++N
Sbjct: 413 SLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSE 472
Query: 861 IGD-VRKVFLRATLKRPLQR---RVPSAVGGWRGYDTDDYNGWSTRPS 730
+G+ K +RA L RPLQR + S W G T G TRP+
Sbjct: 473 LGEGDNKAKVRARLSRPLQRGKGKHASRTDYWPGRTTGRVRGSWTRPA 520