BLASTX nr result

ID: Coptis23_contig00009634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009634
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycin...    65   7e-09
ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [...    62   4e-08
emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group] gi...    62   4e-08
ref|NP_174536.1| putative plastid developmental protein DAG [Ara...    62   5e-08
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...    62   5e-08

>ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycine max]
           gi|255627403|gb|ACU14046.1| unknown [Glycine max]
          Length = 241

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = +1

Query: 46  NHDHWIVHLNNTDREFANALDIFHYCVKLLAKVVG-RKDAKNKVYAVWWKIPFGFCAAID 222
           +++HW++ + N   E AN   +    ++ LAKV+G  ++AK K+Y V  +  FGF   ID
Sbjct: 101 DYNHWLIVMENPGGEGANKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEID 160

Query: 223 EDSVNKLKALQDVLVVLPDYSLDIKRNCKFGEVLFV 330
           E++ NKL+ L  VL VLPD  +D   N  +G  LFV
Sbjct: 161 EETSNKLEGLPGVLFVLPDSYVD-PENKDYGAELFV 195


>ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 215

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = +1

Query: 46  NHDHWIVHLNNTDREFANALDIFHYCVKLLAKVVG-RKDAKNKVYAVWWKIPFGFCAAID 222
           +++HW++ ++    E A    +    ++ LAKVVG  ++AK K+Y V  +  FGF   ID
Sbjct: 76  DYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEID 135

Query: 223 EDSVNKLKALQDVLVVLPDYSLDIKRNCKFGEVLFV 330
           E++ NKL+ L  VL VLPD  +D + N  +G  LFV
Sbjct: 136 EETSNKLEGLPGVLFVLPDSYVDAE-NKDYGAELFV 170


>emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group]
           gi|116310924|emb|CAH67862.1| B0403H10-OSIGBa0105A11.14
           [Oryza sativa Indica Group] gi|218195501|gb|EEC77928.1|
           hypothetical protein OsI_17265 [Oryza sativa Indica
           Group] gi|222629485|gb|EEE61617.1| hypothetical protein
           OsJ_16041 [Oryza sativa Japonica Group]
          Length = 223

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = +1

Query: 46  NHDHWIVHLNNTDREFANALDIFHYCVKLLAKVVG-RKDAKNKVYAVWWKIPFGFCAAID 222
           +++HW++ ++    E A    +    ++ LAKVVG  ++AK K+Y V  +  FGF   ID
Sbjct: 84  DYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEID 143

Query: 223 EDSVNKLKALQDVLVVLPDYSLDIKRNCKFGEVLFV 330
           E++ NKL+ L  VL VLPD  +D + N  +G  LFV
Sbjct: 144 EETSNKLEGLPGVLFVLPDSYVDAE-NKDYGAELFV 178


>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = +1

Query: 46  NHDHWIVHLNNTDREFANALDIFHYCVKLLAKVVG-RKDAKNKVYAVWWKIPFGFCAAID 222
           +++HW++ ++    E A    +    V+ LAK++G  ++AK K+Y V  +  FGF   ID
Sbjct: 92  DYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEID 151

Query: 223 EDSVNKLKALQDVLVVLPDYSLDIKRNCKFGEVLFV 330
           E++ NKL+ L  VL +LPD  +D + N  +G  LFV
Sbjct: 152 EETSNKLEGLPGVLFILPDSYVD-QENKDYGAELFV 186


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = +1

Query: 46  NHDHWIVHLNNTDREFANALDIFHYCVKLLAKVVG-RKDAKNKVYAVWWKIPFGFCAAID 222
           +++HW++ ++    E A    +    ++ LAKVVG  ++AK K+Y V  +  FGF   ID
Sbjct: 112 DYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEID 171

Query: 223 EDSVNKLKALQDVLVVLPDYSLDIKRNCKFGEVLFV 330
           E++ NKL+ L  VL VLPD  +D   N  +G  LFV
Sbjct: 172 EETSNKLEGLPGVLFVLPDSYVD-PENKDYGAELFV 206


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