BLASTX nr result

ID: Coptis23_contig00009616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009616
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853...   181   6e-44
ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-40
dbj|BAK04392.1| predicted protein [Hordeum vulgare subsp. vulgare]    153   2e-35
gb|AAX95672.1| Protein of unknown function, DUF573, putative [Or...   149   2e-34
ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845...   147   9e-34

>ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853960 [Vitis vinifera]
          Length = 344

 Score =  181 bits (460), Expect = 6e-44
 Identities = 102/193 (52%), Positives = 123/193 (63%), Gaps = 10/193 (5%)
 Frame = -2

Query: 572 MSSTPTQS--------ISIKSAARKLPIKRKSPDDQXXXXXXXXXXPKVXXXXXXXXXXX 417
           M STPT           S K++ARKLPIKRK+P               +           
Sbjct: 1   MDSTPTPPQPQLATPHFSPKASARKLPIKRKTPHPSSSTPSPNPNPNLIPKTESTADDDP 60

Query: 416 XERDLVQNLKPPPFKFHRIWTETDEIRFLQGLLDSASEGMIFPRDLHLFYNRFSNTMSQP 237
              D   N K  PFKFHRIWTE DEIRFL+GLLD +S+ + FPRDLH+FY RFS TMSQP
Sbjct: 61  ---DDSGNTKTLPFKFHRIWTEPDEIRFLRGLLDCSSQDLSFPRDLHIFYARFSQTMSQP 117

Query: 236 YTKSQLSEKLRRLRKKFRVISSRISRGLDQSMLSSHDKSIFDLAKKLWDTDHSEFSPFNV 57
           Y+KSQLSEKLRRLRKKFRVIS+R++RGL  + LS HD+++FDL+K+LW  D+S  SPFN 
Sbjct: 118 YSKSQLSEKLRRLRKKFRVISARLARGLHPAQLSPHDRALFDLSKRLWHPDYSSASPFNN 177

Query: 56  N--NIAVRKKPIT 24
           N  NI  +K   T
Sbjct: 178 NLSNICGKKSKST 190


>ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|222848825|gb|EEE86372.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  168 bits (425), Expect = 7e-40
 Identities = 95/181 (52%), Positives = 115/181 (63%), Gaps = 8/181 (4%)
 Frame = -2

Query: 572 MSSTPT-QSISIK----SAARKLPIKRKSPDDQXXXXXXXXXXPKVXXXXXXXXXXXXER 408
           M STP  Q I  K    S+A KLPIKRK+PD                             
Sbjct: 1   MDSTPVPQHIPFKPSSSSSASKLPIKRKTPDSLHHHHLLSPKLETSSTTTPTTTNPDAIS 60

Query: 407 DLVQNL--KPPPFKFHRIWTETDEIRFLQGLLDSASEGMIFPRDLHLFYNRFSNTMSQPY 234
               N   KPPPFKFHRIW+E DEI FLQGLL S+S+G+ FP+DL  FY+RFSN+MSQPY
Sbjct: 61  TPTTNSESKPPPFKFHRIWSEPDEISFLQGLLSSSSQGLSFPKDLPFFYDRFSNSMSQPY 120

Query: 233 TKSQLSEKLRRLRKKFRVISSRISR-GLDQSMLSSHDKSIFDLAKKLWDTDHSEFSPFNV 57
           TKSQLSEK+RRLRKKFR  SSR++R G + S+LS HD+S+FDL+K+LW  + +  SPF  
Sbjct: 121 TKSQLSEKMRRLRKKFRSTSSRLARNGFNYSLLSPHDRSLFDLSKQLWSPEFASSSPFGG 180

Query: 56  N 54
           N
Sbjct: 181 N 181


>dbj|BAK04392.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 398

 Score =  153 bits (387), Expect = 2e-35
 Identities = 80/166 (48%), Positives = 105/166 (63%)
 Frame = -2

Query: 560 PTQSISIKSAARKLPIKRKSPDDQXXXXXXXXXXPKVXXXXXXXXXXXXERDLVQNLKPP 381
           PT S S  SAARKLPIKR+SP              +                L    + P
Sbjct: 33  PTPSPSPASAARKLPIKRRSPP-------------RPSSSPSSSGAASSGDPLKAAHQQP 79

Query: 380 PFKFHRIWTETDEIRFLQGLLDSASEGMIFPRDLHLFYNRFSNTMSQPYTKSQLSEKLRR 201
           PFKF RIW+E+DE+RFLQGLL   ++G++FPRDL++FY+RFS +M QPYT+SQLSEKLRR
Sbjct: 80  PFKFQRIWSESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRR 139

Query: 200 LRKKFRVISSRISRGLDQSMLSSHDKSIFDLAKKLWDTDHSEFSPF 63
           LR K R +S+R++RGLD + L+ HD+ +  L  +LWD   +  SPF
Sbjct: 140 LRNKHRGVSARVARGLDPARLAPHDRDVLHLCSRLWDPASAATSPF 185


>gb|AAX95672.1| Protein of unknown function, DUF573, putative [Oryza sativa
           Japonica Group] gi|108710693|gb|ABF98488.1| expressed
           protein [Oryza sativa Japonica Group]
          Length = 375

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/166 (44%), Positives = 104/166 (62%)
 Frame = -2

Query: 560 PTQSISIKSAARKLPIKRKSPDDQXXXXXXXXXXPKVXXXXXXXXXXXXERDLVQNLKPP 381
           P+   +  +AARKLP+KR+SP  +                                  PP
Sbjct: 36  PSAPPAAAAAARKLPVKRRSPPPRPSSPSSSDPASSDPAAKQQPQQP-----------PP 84

Query: 380 PFKFHRIWTETDEIRFLQGLLDSASEGMIFPRDLHLFYNRFSNTMSQPYTKSQLSEKLRR 201
           PFKF RIW+E+DE+RFLQGLL   ++G++FPRDL++FY+RFS +M  PYT+SQLSEKLRR
Sbjct: 85  PFKFQRIWSESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPSPYTRSQLSEKLRR 144

Query: 200 LRKKFRVISSRISRGLDQSMLSSHDKSIFDLAKKLWDTDHSEFSPF 63
           L+ KFR +S+R++RGLD + L+ HD+ +  L  +LWD  ++  SPF
Sbjct: 145 LKNKFRGMSARVARGLDPARLAPHDRDVLHLCSRLWDPANAATSPF 190


>ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845859 [Brachypodium
           distachyon]
          Length = 372

 Score =  147 bits (372), Expect = 9e-34
 Identities = 78/167 (46%), Positives = 107/167 (64%)
 Frame = -2

Query: 563 TPTQSISIKSAARKLPIKRKSPDDQXXXXXXXXXXPKVXXXXXXXXXXXXERDLVQNLKP 384
           TP  S S  SAARKLP+KR+SP              +             ++D       
Sbjct: 34  TPPASASA-SAARKLPVKRRSPP-------------RPSSSPSSSGPTAADQD-----GQ 74

Query: 383 PPFKFHRIWTETDEIRFLQGLLDSASEGMIFPRDLHLFYNRFSNTMSQPYTKSQLSEKLR 204
           PPFKF RIW+E+DE+RFLQGLL   ++G++FPRDL++FY+RFS +M QPYT+SQLSEKLR
Sbjct: 75  PPFKFQRIWSESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLR 134

Query: 203 RLRKKFRVISSRISRGLDQSMLSSHDKSIFDLAKKLWDTDHSEFSPF 63
           RL+ K R +S+R++RGLD + L+ HD+ +  L  +LWD  ++  SPF
Sbjct: 135 RLKNKHRNVSTRVARGLDPARLAPHDRDVLHLCSRLWDPANAATSPF 181


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