BLASTX nr result

ID: Coptis23_contig00009614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009614
         (1641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532580.1| cop9 signalosome complex subunit, putative [...   747   0.0  
emb|CBI32857.3| unnamed protein product [Vitis vinifera]              747   0.0  
ref|XP_002283810.1| PREDICTED: COP9 signalosome complex subunit ...   747   0.0  
ref|XP_002314240.1| predicted protein [Populus trichocarpa] gi|1...   745   0.0  
ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|2...   741   0.0  

>ref|XP_002532580.1| cop9 signalosome complex subunit, putative [Ricinus communis]
            gi|223527689|gb|EEF29797.1| cop9 signalosome complex
            subunit, putative [Ricinus communis]
          Length = 439

 Score =  747 bits (1929), Expect = 0.0
 Identities = 369/433 (85%), Positives = 392/433 (90%)
 Frame = +1

Query: 103  DMEDYGFEYSXXXXXXXXXXXXNQYYNSKGLVETDPEGALAGFSEVVRMEPEKGEWGFKA 282
            DMEDYGFEYS            NQYYNSKGLVETDPE ALAGF+EVV MEPEK EWGFKA
Sbjct: 6    DMEDYGFEYSDDEPEEQDVDIENQYYNSKGLVETDPEAALAGFAEVVSMEPEKAEWGFKA 65

Query: 283  LKQTVKLYYRLGKYKDMMDAYREMLTYIKSAVTRNYSEKCMSNIMDFVSGAASQNSGFLQ 462
            LKQTVKLYYRLGKYK+MMDAYREMLTYIKSAVTRNYSEKC++NIMDFVSG+ASQN G LQ
Sbjct: 66   LKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFGLLQ 125

Query: 463  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMNKILKEVHKSCRKEDGTDDQK 642
            EFYQTTLKALEEAKNERLWFKTNLKLCKIWFD+GEYGRM+KILKE+HKSC++EDGTDDQK
Sbjct: 126  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK 185

Query: 643  KGTQLLEVYAIEIQMYTETXXXXXXXXXXXXALSIKSAIPHPRIMGIIRECGGKMHMAER 822
            KG+QLLEVYAIEIQMYTET            AL+IKSAIPHPRIMGIIRECGGKMHMAER
Sbjct: 186  KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 245

Query: 823  QWAEAATDFFEAFKNYDEAGNQRRIQTLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 1002
            QWAEAATDFFEAFKNYDEAGNQRRIQ LKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL
Sbjct: 246  QWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 305

Query: 1003 AMTNLIGAYQRNEILAFEKTLKTNRSTIMDDPFIRMYIEDLLKKIRTQVLLKLIRPYTRI 1182
            AMTNLI AYQRNEIL FEK LK+NR TIMDDPFIR YIEDLLK +RTQVLLKLI+PYTRI
Sbjct: 306  AMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 365

Query: 1183 RIPFISKELNVPANDVEQLLVSLILDNRIHGHIDQVNQLLERGDRSKGVKKFAAIDKWNT 1362
            RIPFISKELNVP  DVEQLLVSLILDNRI GHIDQVN+LLERGDRSKG+KK+ AIDKWNT
Sbjct: 366  RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIDKWNT 425

Query: 1363 QLSTIYQTVSNKI 1401
            QL ++YQT+SN++
Sbjct: 426  QLRSLYQTISNRV 438


>emb|CBI32857.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  747 bits (1928), Expect = 0.0
 Identities = 369/434 (85%), Positives = 393/434 (90%)
 Frame = +1

Query: 103  DMEDYGFEYSXXXXXXXXXXXXNQYYNSKGLVETDPEGALAGFSEVVRMEPEKGEWGFKA 282
            DMEDYGFEYS            NQYYNSKGLVETDPEGALAGF+EVVRMEPEK EWGFKA
Sbjct: 7    DMEDYGFEYSEEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVRMEPEKAEWGFKA 66

Query: 283  LKQTVKLYYRLGKYKDMMDAYREMLTYIKSAVTRNYSEKCMSNIMDFVSGAASQNSGFLQ 462
            LKQTVKLYYRLGKYK+MM+AYR MLTYIKSAVTRNYSEKC++NIMDFVSG+ASQN G LQ
Sbjct: 67   LKQTVKLYYRLGKYKEMMEAYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFGLLQ 126

Query: 463  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMNKILKEVHKSCRKEDGTDDQK 642
            EFYQTTLKALEEAKNERLWFKTNLKLCKIWFD+GEYGRM+KILKE+HKSCR+EDGTDDQK
Sbjct: 127  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCRREDGTDDQK 186

Query: 643  KGTQLLEVYAIEIQMYTETXXXXXXXXXXXXALSIKSAIPHPRIMGIIRECGGKMHMAER 822
            KGTQLLEVYAIEIQMYTET            AL+IKSAIPHPRIMGII ECGGKMHMAER
Sbjct: 187  KGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAER 246

Query: 823  QWAEAATDFFEAFKNYDEAGNQRRIQTLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 1002
            QWA+AATDFFEAFKNYDEAGNQRRIQ LKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL
Sbjct: 247  QWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 306

Query: 1003 AMTNLIGAYQRNEILAFEKTLKTNRSTIMDDPFIRMYIEDLLKKIRTQVLLKLIRPYTRI 1182
            AMTNLI AYQRNEIL FEK LK+NR TIMDD FIR YIEDLLK IRTQVLLKLI+PYTRI
Sbjct: 307  AMTNLIAAYQRNEILEFEKILKSNRRTIMDDLFIRNYIEDLLKNIRTQVLLKLIKPYTRI 366

Query: 1183 RIPFISKELNVPANDVEQLLVSLILDNRIHGHIDQVNQLLERGDRSKGVKKFAAIDKWNT 1362
            RIPFISKELNVP  DVEQLLVSLILDNRI GHIDQVN+LLERGDRSKG+KK+AA++KWNT
Sbjct: 367  RIPFISKELNVPEEDVEQLLVSLILDNRIQGHIDQVNRLLERGDRSKGMKKYAAVEKWNT 426

Query: 1363 QLSTIYQTVSNKIG 1404
            QL ++YQT+SN++G
Sbjct: 427  QLKSLYQTISNRVG 440


>ref|XP_002283810.1| PREDICTED: COP9 signalosome complex subunit 2-like [Vitis vinifera]
          Length = 439

 Score =  747 bits (1928), Expect = 0.0
 Identities = 369/434 (85%), Positives = 393/434 (90%)
 Frame = +1

Query: 103  DMEDYGFEYSXXXXXXXXXXXXNQYYNSKGLVETDPEGALAGFSEVVRMEPEKGEWGFKA 282
            DMEDYGFEYS            NQYYNSKGLVETDPEGALAGF+EVVRMEPEK EWGFKA
Sbjct: 6    DMEDYGFEYSEEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVRMEPEKAEWGFKA 65

Query: 283  LKQTVKLYYRLGKYKDMMDAYREMLTYIKSAVTRNYSEKCMSNIMDFVSGAASQNSGFLQ 462
            LKQTVKLYYRLGKYK+MM+AYR MLTYIKSAVTRNYSEKC++NIMDFVSG+ASQN G LQ
Sbjct: 66   LKQTVKLYYRLGKYKEMMEAYRVMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFGLLQ 125

Query: 463  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMNKILKEVHKSCRKEDGTDDQK 642
            EFYQTTLKALEEAKNERLWFKTNLKLCKIWFD+GEYGRM+KILKE+HKSCR+EDGTDDQK
Sbjct: 126  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCRREDGTDDQK 185

Query: 643  KGTQLLEVYAIEIQMYTETXXXXXXXXXXXXALSIKSAIPHPRIMGIIRECGGKMHMAER 822
            KGTQLLEVYAIEIQMYTET            AL+IKSAIPHPRIMGII ECGGKMHMAER
Sbjct: 186  KGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAER 245

Query: 823  QWAEAATDFFEAFKNYDEAGNQRRIQTLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 1002
            QWA+AATDFFEAFKNYDEAGNQRRIQ LKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL
Sbjct: 246  QWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 305

Query: 1003 AMTNLIGAYQRNEILAFEKTLKTNRSTIMDDPFIRMYIEDLLKKIRTQVLLKLIRPYTRI 1182
            AMTNLI AYQRNEIL FEK LK+NR TIMDD FIR YIEDLLK IRTQVLLKLI+PYTRI
Sbjct: 306  AMTNLIAAYQRNEILEFEKILKSNRRTIMDDLFIRNYIEDLLKNIRTQVLLKLIKPYTRI 365

Query: 1183 RIPFISKELNVPANDVEQLLVSLILDNRIHGHIDQVNQLLERGDRSKGVKKFAAIDKWNT 1362
            RIPFISKELNVP  DVEQLLVSLILDNRI GHIDQVN+LLERGDRSKG+KK+AA++KWNT
Sbjct: 366  RIPFISKELNVPEEDVEQLLVSLILDNRIQGHIDQVNRLLERGDRSKGMKKYAAVEKWNT 425

Query: 1363 QLSTIYQTVSNKIG 1404
            QL ++YQT+SN++G
Sbjct: 426  QLKSLYQTISNRVG 439


>ref|XP_002314240.1| predicted protein [Populus trichocarpa] gi|118481037|gb|ABK92472.1|
            unknown [Populus trichocarpa] gi|222850648|gb|EEE88195.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  745 bits (1923), Expect = 0.0
 Identities = 368/433 (84%), Positives = 392/433 (90%)
 Frame = +1

Query: 103  DMEDYGFEYSXXXXXXXXXXXXNQYYNSKGLVETDPEGALAGFSEVVRMEPEKGEWGFKA 282
            DMEDYGFEYS            NQYYNSKGLVETDPEGALAGF+EVV MEPEK EWGFKA
Sbjct: 6    DMEDYGFEYSDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVSMEPEKAEWGFKA 65

Query: 283  LKQTVKLYYRLGKYKDMMDAYREMLTYIKSAVTRNYSEKCMSNIMDFVSGAASQNSGFLQ 462
            LKQTVKLYYRLGKYK+MM+AYREMLTYIKSAVTRNYSEKC++NIMDFVSG+ASQN G LQ
Sbjct: 66   LKQTVKLYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFGLLQ 125

Query: 463  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMNKILKEVHKSCRKEDGTDDQK 642
            EFYQTTLKALEEAKNERLWFKTNLKLCKIWFD+GEYGRM+KILKE+HKSC++EDGTDDQK
Sbjct: 126  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK 185

Query: 643  KGTQLLEVYAIEIQMYTETXXXXXXXXXXXXALSIKSAIPHPRIMGIIRECGGKMHMAER 822
            KG+QLLEVYAIEIQMYTET            AL+IKSAIPHPRIMGIIRECGGKMHMAER
Sbjct: 186  KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 245

Query: 823  QWAEAATDFFEAFKNYDEAGNQRRIQTLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 1002
            QWAEAATDFFEAFKNYDEAGNQRRIQ LKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL
Sbjct: 246  QWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 305

Query: 1003 AMTNLIGAYQRNEILAFEKTLKTNRSTIMDDPFIRMYIEDLLKKIRTQVLLKLIRPYTRI 1182
            AMTNLI AYQRNEIL FEK LK+NR TIMDDPFIR YIEDLLK +RTQVLLKLI+PYTRI
Sbjct: 306  AMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 365

Query: 1183 RIPFISKELNVPANDVEQLLVSLILDNRIHGHIDQVNQLLERGDRSKGVKKFAAIDKWNT 1362
            RIPFISKELNVP  DVEQLLVSLILDNRI GHIDQVN+LLERGDRSKG+KK+ AI+KWN 
Sbjct: 366  RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIEKWNA 425

Query: 1363 QLSTIYQTVSNKI 1401
            QL ++YQTVSN++
Sbjct: 426  QLRSLYQTVSNRV 438


>ref|XP_002330981.1| predicted protein [Populus trichocarpa] gi|222872773|gb|EEF09904.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  741 bits (1913), Expect = 0.0
 Identities = 366/433 (84%), Positives = 391/433 (90%)
 Frame = +1

Query: 103  DMEDYGFEYSXXXXXXXXXXXXNQYYNSKGLVETDPEGALAGFSEVVRMEPEKGEWGFKA 282
            DMEDYGFEYS            NQYYNSKGLVETDPEGALAGF+EVV MEPEK EWGFKA
Sbjct: 6    DMEDYGFEYSDEEPEEQDVDIENQYYNSKGLVETDPEGALAGFAEVVSMEPEKAEWGFKA 65

Query: 283  LKQTVKLYYRLGKYKDMMDAYREMLTYIKSAVTRNYSEKCMSNIMDFVSGAASQNSGFLQ 462
            LKQTVK+YYRLGKYK+MM+AYREMLTYIKSAVTRNYSEKC++NIMDFVSG+ASQN   LQ
Sbjct: 66   LKQTVKIYYRLGKYKEMMEAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLQ 125

Query: 463  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMNKILKEVHKSCRKEDGTDDQK 642
            EFYQTTLKALEEAKNERLWFKTNLKLCKIWF +GEYGRM+KILKE+HKSC++EDGTDDQK
Sbjct: 126  EFYQTTLKALEEAKNERLWFKTNLKLCKIWFGMGEYGRMSKILKELHKSCQREDGTDDQK 185

Query: 643  KGTQLLEVYAIEIQMYTETXXXXXXXXXXXXALSIKSAIPHPRIMGIIRECGGKMHMAER 822
            KG+QLLEVYAIEIQMYTET            AL+IKSAIPHPRIMGIIRECGGKMHMAER
Sbjct: 186  KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER 245

Query: 823  QWAEAATDFFEAFKNYDEAGNQRRIQTLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 1002
            QWAEAATDFFEAFKNYDEAGNQRRIQ LKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL
Sbjct: 246  QWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEIL 305

Query: 1003 AMTNLIGAYQRNEILAFEKTLKTNRSTIMDDPFIRMYIEDLLKKIRTQVLLKLIRPYTRI 1182
            AMTNLI AYQRNEIL FEK LK+NR TIMDDPFIR YIEDLLK +RTQVLLKLI+PYTRI
Sbjct: 306  AMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRI 365

Query: 1183 RIPFISKELNVPANDVEQLLVSLILDNRIHGHIDQVNQLLERGDRSKGVKKFAAIDKWNT 1362
            RIPFISKELNVP  DVEQLLVSLILDNRI GHIDQVN+LLERGDRSKG+KK+ AI+KWNT
Sbjct: 366  RIPFISKELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRSKGMKKYTAIEKWNT 425

Query: 1363 QLSTIYQTVSNKI 1401
            QL ++YQTVSN++
Sbjct: 426  QLRSLYQTVSNRV 438


Top