BLASTX nr result

ID: Coptis23_contig00009612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00009612
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265916.2| PREDICTED: uncharacterized protein LOC100241...   216   2e-54
ref|XP_002317807.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_004136872.1| PREDICTED: uncharacterized protein LOC101218...   209   2e-52
ref|XP_002530267.1| conserved hypothetical protein [Ricinus comm...   203   1e-50
ref|XP_002321368.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50

>ref|XP_002265916.2| PREDICTED: uncharacterized protein LOC100241703 [Vitis vinifera]
           gi|296085678|emb|CBI29477.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score =  216 bits (550), Expect = 2e-54
 Identities = 112/152 (73%), Positives = 133/152 (87%)
 Frame = +2

Query: 5   MEEEEKGNERWGAAIVNLTEMGSNLDSLQKLVVKKAVFVDDETFSKASLSSQQARTIKAL 184
           MEE+ KG+ERW AAI NL+EM SNL+SLQKL++KKAVFVD+ETF+KASLSS+QAR IK L
Sbjct: 1   MEEKGKGSERWSAAIGNLSEMTSNLESLQKLLLKKAVFVDEETFAKASLSSEQARIIKVL 60

Query: 185 EQRVETLEREVDXXXXXXXXXXSDKRQAQVAQRAAELNALEVTRQLENTTKVFQLHMEEL 364
           EQRVETLERE+D          S+KRQA+ AQ+AAEL + E+TR+LENTTKVF+LHMEEL
Sbjct: 61  EQRVETLERELDAAITAAARARSEKRQAEAAQKAAELRSQEITRELENTTKVFELHMEEL 120

Query: 365 RAKQEEISKRDSDIKLLEAIIQTLGGKESSTS 460
           RAKQ+EI+KRDSDIK+LEAIIQTLGGKESS+S
Sbjct: 121 RAKQQEIAKRDSDIKVLEAIIQTLGGKESSSS 152


>ref|XP_002317807.1| predicted protein [Populus trichocarpa] gi|222858480|gb|EEE96027.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  213 bits (542), Expect = 1e-53
 Identities = 115/154 (74%), Positives = 128/154 (83%), Gaps = 5/154 (3%)
 Frame = +2

Query: 5   MEEEEKGN-----ERWGAAIVNLTEMGSNLDSLQKLVVKKAVFVDDETFSKASLSSQQAR 169
           MEE EKGN     ERW  A+ NLTEM SNLDSLQKL+VKKAVFVDDETFSKASL+S+QAR
Sbjct: 1   MEEIEKGNKGGSEERWKGAVDNLTEMTSNLDSLQKLLVKKAVFVDDETFSKASLTSEQAR 60

Query: 170 TIKALEQRVETLEREVDXXXXXXXXXXSDKRQAQVAQRAAELNALEVTRQLENTTKVFQL 349
           TIK LEQRVETLER +D          ++KRQA+ AQ+AAEL A E+TR+LENTTKVF+L
Sbjct: 61  TIKVLEQRVETLERGLDAAISAAARARAEKRQAEAAQKAAELRAQEITRELENTTKVFEL 120

Query: 350 HMEELRAKQEEISKRDSDIKLLEAIIQTLGGKES 451
           HMEELRAKQ+EISKRD DIKLLEAIIQTLGGKES
Sbjct: 121 HMEELRAKQDEISKRDGDIKLLEAIIQTLGGKES 154


>ref|XP_004136872.1| PREDICTED: uncharacterized protein LOC101218756 [Cucumis sativus]
           gi|449478888|ref|XP_004155445.1| PREDICTED:
           uncharacterized protein LOC101224157 [Cucumis sativus]
          Length = 148

 Score =  209 bits (532), Expect = 2e-52
 Identities = 106/148 (71%), Positives = 126/148 (85%)
 Frame = +2

Query: 5   MEEEEKGNERWGAAIVNLTEMGSNLDSLQKLVVKKAVFVDDETFSKASLSSQQARTIKAL 184
           ME++ KG +RW  A+ NLTEM SNLDSLQKL++KKAV+VDDETF++ASL S+QARTIK L
Sbjct: 1   MEDKGKGTDRWSGAVANLTEMTSNLDSLQKLLLKKAVYVDDETFARASLCSEQARTIKVL 60

Query: 185 EQRVETLEREVDXXXXXXXXXXSDKRQAQVAQRAAELNALEVTRQLENTTKVFQLHMEEL 364
           EQRVETLERE+D          S+KRQA+ AQRAAE++  EVT++LENTTKVFQLHM+EL
Sbjct: 61  EQRVETLERELDAAITSAAHARSEKRQAEAAQRAAEVHVQEVTKELENTTKVFQLHMDEL 120

Query: 365 RAKQEEISKRDSDIKLLEAIIQTLGGKE 448
           RAKQEEI+KRD DIKLLEAIIQTLGG+E
Sbjct: 121 RAKQEEINKRDKDIKLLEAIIQTLGGRE 148


>ref|XP_002530267.1| conserved hypothetical protein [Ricinus communis]
           gi|223530199|gb|EEF32107.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 154

 Score =  203 bits (516), Expect = 1e-50
 Identities = 102/148 (68%), Positives = 124/148 (83%)
 Frame = +2

Query: 5   MEEEEKGNERWGAAIVNLTEMGSNLDSLQKLVVKKAVFVDDETFSKASLSSQQARTIKAL 184
           M++   G ERW  AI N+TEM SNLDSL KL++KKAVFVD++TF+KASL+S+QARTIK L
Sbjct: 1   MDKGSSGGERWKGAIANITEMASNLDSLHKLLIKKAVFVDEDTFAKASLTSEQARTIKVL 60

Query: 185 EQRVETLEREVDXXXXXXXXXXSDKRQAQVAQRAAELNALEVTRQLENTTKVFQLHMEEL 364
           EQRV+TLERE+D          ++KRQA+ AQ+AAEL   E+TR+LENTTKVF+LHMEEL
Sbjct: 61  EQRVDTLERELDAAISAAARARAEKRQAEAAQKAAELRQQEITRELENTTKVFELHMEEL 120

Query: 365 RAKQEEISKRDSDIKLLEAIIQTLGGKE 448
           RAKQ+EISKRD++IKLLEAIIQTLGGKE
Sbjct: 121 RAKQDEISKRDNEIKLLEAIIQTLGGKE 148


>ref|XP_002321368.1| predicted protein [Populus trichocarpa] gi|222868364|gb|EEF05495.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  203 bits (516), Expect = 1e-50
 Identities = 109/157 (69%), Positives = 130/157 (82%), Gaps = 5/157 (3%)
 Frame = +2

Query: 5   MEEEEKGN-----ERWGAAIVNLTEMGSNLDSLQKLVVKKAVFVDDETFSKASLSSQQAR 169
           MEE+EKG+     ERW  AI NLT M  NLDSLQKL++KKAVFV++ETFSKASL+S+QAR
Sbjct: 1   MEEKEKGSKGGSEERWKGAIANLTGMTLNLDSLQKLLLKKAVFVNEETFSKASLTSEQAR 60

Query: 170 TIKALEQRVETLEREVDXXXXXXXXXXSDKRQAQVAQRAAELNALEVTRQLENTTKVFQL 349
           +IK LEQRVETLERE+D          ++KRQA+ AQ+ AEL A E+TR+LE+TTKVF+L
Sbjct: 61  SIKVLEQRVETLERELDAAISAAAHARAEKRQAEAAQKDAELRAQEITRELESTTKVFEL 120

Query: 350 HMEELRAKQEEISKRDSDIKLLEAIIQTLGGKESSTS 460
           HMEELRAKQEEISKR+SDIKLLEAIIQTLGGKES ++
Sbjct: 121 HMEELRAKQEEISKRESDIKLLEAIIQTLGGKESRST 157


Top